GREMLIN Database
FADE - Probable acyl-CoA dehydrogenase
UniProt: O32176 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 594 (500)
Sequences: 5446 (3130)
Seq/√Len: 140.0

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
138_G143_E6.3511.00
129_E133_K5.5701.00
169_N176_V3.7901.00
178_T239_Q3.7841.00
54_D58_N3.5441.00
205_S247_L3.4481.00
129_E132_K3.3671.00
376_G391_V3.2391.00
69_K73_E3.0991.00
285_A312_A3.0411.00
199_V251_I3.0241.00
387_Q392_E2.9661.00
42_E46_E2.9401.00
250_E253_K2.8361.00
131_Q208_I2.8161.00
468_A489_I2.8111.00
82_P124_V2.7031.00
169_N174_H2.6861.00
325_T361_N2.6291.00
126_F260_N2.6091.00
127_G131_Q2.5741.00
188_A218_T2.4191.00
297_P300_G2.4081.00
128_S131_Q2.3871.00
367_E408_N2.3351.00
171_A174_H2.3301.00
217_S238_D2.3171.00
183_W386_M2.2981.00
370_D402_R2.2891.00
460_I467_I2.2641.00
280_V373_V2.2531.00
318_M365_G2.2291.00
40_T43_D2.1681.00
48_D70_K2.1551.00
65_V69_K2.1511.00
63_H221_E2.1381.00
286_A290_Q2.1241.00
83_E89_G2.1071.00
253_K256_V2.0991.00
174_H241_E2.0851.00
162_A198_K2.0771.00
277_S372_I2.0721.00
157_S410_I2.0011.00
168_L251_I1.9521.00
310_T375_E1.9391.00
277_S315_L1.9291.00
133_K137_P1.9181.00
55_D59_H1.9161.00
288_A379_I1.9031.00
414_I418_T1.8901.00
219_G236_I1.8531.00
370_D395_Y1.8331.00
227_I400_I1.8221.00
180_E236_I1.8171.00
344_G347_I1.8161.00
123_I208_I1.8131.00
464_A467_I1.7751.00
307_K375_E1.7621.00
435_Q465_K1.7391.00
138_G144_K1.7281.00
151_T183_W1.6871.00
342_K347_I1.6791.00
310_T531_I1.6541.00
321_S361_N1.6531.00
44_Y74_L1.6431.00
374_D395_Y1.6431.00
313_S528_Y1.6301.00
176_V244_K1.6261.00
123_I139_L1.6231.00
52_H55_D1.6121.00
134_K138_G1.6061.00
311_M372_I1.6051.00
111_S231_S1.6041.00
296_T300_G1.6011.00
176_V239_Q1.5971.00
216_V235_L1.5881.00
174_H244_K1.5831.00
159_A255_H1.5831.00
289_N299_A1.5681.00
43_D47_Q1.5651.00
317_A498_S1.5611.00
433_K436_S1.5481.00
217_S236_I1.5421.00
208_I248_L1.5391.00
162_A204_F1.5321.00
467_I472_A1.5121.00
207_F242_V1.5111.00
280_V376_G1.5091.00
165_T178_T1.5021.00
41_T98_I1.4981.00
414_I419_F1.4971.00
281_I315_L1.4971.00
430_L434_A1.4951.00
197_A207_F1.4871.00
457_E460_I1.4831.00
149_A237_L1.4801.00
303_L409_E1.4781.00
132_K136_L1.4781.00
270_A361_N1.4761.00
283_L394_A1.4761.00
69_K72_G1.4751.00
292_R297_P1.4661.00
279_R394_A1.4651.00
298_I304_T1.4621.00
58_N387_Q1.4611.00
66_R69_K1.4581.00
213_F216_V1.4561.00
175_Y199_V1.4551.00
371_Y375_E1.4541.00
115_H139_L1.4441.00
44_Y70_K1.4401.00
503_M533_V1.4361.00
34_H94_S1.4301.00
247_L251_I1.4281.00
383_Y389_Y1.4221.00
49_V106_G1.4211.00
465_K469_L1.4161.00
138_G141_S1.4111.00
415_V419_F1.4051.00
273_T366_S1.4031.00
215_G240_A1.4031.00
97_L323_Y1.4031.00
170_E200_D1.4021.00
363_V408_N1.3941.00
49_V108_F1.3881.00
180_E234_T1.3871.00
450_G457_E1.3851.00
327_G331_D1.3731.00
209_V245_E1.3731.00
53_I393_R1.3701.00
81_V140_A1.3701.00
315_L372_I1.3621.00
178_T238_D1.3601.00
174_H246_N1.3581.00
223_K387_Q1.3561.00
374_D402_R1.3501.00
461_V467_I1.3411.00
215_G239_Q1.3321.00
370_D374_D1.3261.00
145_I190_A1.3221.00
513_A522_A1.3201.00
82_P85_Y1.3181.00
371_Y374_D1.3131.00
177_L207_F1.3121.00
122_P194_V1.3091.00
279_R283_L1.3091.00
307_K409_E1.3031.00
463_Q467_I1.3011.00
153_P180_E1.2991.00
68_L72_G1.2971.00
137_P141_S1.2961.00
193_F211_K1.2931.00
223_K228_K1.2901.00
462_K466_K1.2851.00
119_G139_L1.2851.00
167_V178_T1.2781.00
281_I285_A1.2741.00
343_D347_I1.2661.00
85_Y132_K1.2591.00
288_A304_T1.2541.00
240_A243_P1.2441.00
222_E232_T1.2431.00
374_D377_V1.2411.00
511_E515_A1.2381.00
453_V456_Q1.2351.00
429_P433_K1.2341.00
45_I102_F1.2301.00
469_L473_G1.2301.00
219_G234_T1.2301.00
360_L498_S1.2191.00
79_A88_L1.2141.00
41_T44_Y1.2121.00
304_T307_K1.2101.00
402_R408_N1.2101.00
437_L441_L1.2041.00
414_I417_S1.2021.00
102_F109_S1.2011.00
169_N244_K1.2001.00
287_Y383_Y1.1971.00
130_E134_K1.1921.00
373_V394_A1.1841.00
513_A523_A1.1821.00
377_V395_Y1.1821.00
59_H62_E1.1811.00
225_M395_Y1.1771.00
149_A193_F1.1751.00
84_E133_K1.1741.00
41_T45_I1.1731.00
463_Q466_K1.1731.00
464_A496_I1.1721.00
134_K245_E1.1721.00
311_M376_G1.1680.99
110_L185_T1.1670.99
41_T46_E1.1650.99
158_D161_G1.1640.99
36_M40_T1.1620.99
72_G77_L1.1600.99
276_A398_S1.1580.99
80_D95_S1.1530.99
96_A326_V1.1500.99
218_T235_L1.1490.99
274_I315_L1.1450.99
61_F64_S1.1430.99
510_T513_A1.1400.99
450_G454_L1.1390.99
177_L245_E1.1380.99
316_Y525_K1.1340.99
363_V367_E1.1330.99
369_L401_N1.1270.99
328_L350_S1.1260.99
225_M392_E1.1240.99
283_L380_H1.1200.99
84_E129_E1.1160.99
351_I355_A1.1140.99
187_S235_L1.1140.99
452_G456_Q1.1120.99
35_K39_K1.1060.99
380_H391_V1.1060.99
280_V391_V1.1040.99
508_L512_K1.1000.99
183_W383_Y1.1000.99
104_R278_K1.0990.99
79_A98_I1.0990.99
450_G453_V1.0930.99
147_A184_I1.0930.99
539_E543_H1.0920.99
530_E534_Q1.0910.99
192_V208_I1.0900.99
179_G235_L1.0810.99
430_L497_V1.0750.99
451_S455_E1.0730.99
317_A502_A1.0720.99
499_N539_E1.0710.99
44_Y48_D1.0700.99
70_K73_E1.0690.99
461_V465_K1.0690.99
344_G348_A1.0680.99
176_V241_E1.0660.99
332_N351_I1.0630.99
374_D399_R1.0630.99
194_V206_A1.0630.99
349_K433_K1.0600.99
438_Q441_L1.0600.99
38_A97_L1.0530.99
220_P234_T1.0520.99
135_Y246_N1.0510.99
157_S294_F1.0400.99
363_V490_L1.0380.99
317_A532_F1.0300.99
459_Y463_Q1.0300.99
456_Q459_Y1.0300.99
163_K166_A1.0270.99
373_V395_Y1.0260.99
166_A197_A1.0250.99
130_E133_K1.0240.99
460_I468_A1.0170.99
415_V418_T1.0150.99
274_I318_M1.0150.99
331_D350_S1.0130.99
55_D229_G1.0110.99
468_A471_A1.0080.99
453_V457_E1.0080.99
278_K282_E1.0050.98
467_I471_A1.0040.98
313_S531_I1.0030.98
175_Y207_F1.0020.98
451_S454_L1.0010.98
439_E442_M1.0000.98
278_K319_E0.9980.98
470_F474_L0.9930.98
55_D58_N0.9920.98
143_E191_D0.9900.98
460_I463_Q0.9880.98
304_T379_I0.9860.98
454_L457_E0.9840.98
441_L503_M0.9800.98
177_L237_L0.9780.98
85_Y133_K0.9760.98
262_L265_G0.9730.98
521_K525_K0.9670.98
430_L433_K0.9660.98
368_T371_Y0.9650.98
56_I106_G0.9650.98
437_L507_V0.9590.98
502_A505_S0.9570.98
460_I464_A0.9540.98
267_Y361_N0.9530.98
367_E491_V0.9500.98
277_S369_L0.9500.98
506_A529_T0.9480.98
320_S505_S0.9460.98
169_N172_G0.9460.98
68_L77_L0.9460.98
514_I522_A0.9450.98
156_G405_E0.9450.98
130_E245_E0.9420.98
349_K429_P0.9420.98
187_S233_R0.9360.98
194_V261_I0.9340.98
523_A526_V0.9300.97
380_H390_E0.9290.97
274_I322_V0.9280.97
238_D243_P0.9250.97
468_A474_L0.9250.97
70_K74_L0.9230.97
324_R501_Y0.9220.97
389_Y392_E0.9220.97
178_T215_G0.9220.97
412_R486_E0.9200.97
352_A429_P0.9200.97
195_V237_L0.9190.97
452_G455_E0.9180.97
435_Q461_V0.9140.97
318_M372_I0.9080.97
449_P452_G0.9060.97
318_M368_T0.9010.97
242_V246_N0.9000.97
467_I475_A0.8990.97
503_M536_A0.8980.97
314_R368_T0.8930.97
416_P419_F0.8920.97
145_I191_D0.8880.97
53_I56_I0.8840.97
449_P456_Q0.8830.97
49_V53_I0.8830.97
544_A548_L0.8800.96
36_M39_K0.8750.96
364_F368_T0.8750.96
215_G238_D0.8720.96
48_D66_R0.8720.96
284_S379_I0.8710.96
461_V472_A0.8700.96
81_V120_S0.8690.96
183_W287_Y0.8690.96
321_S502_A0.8690.96
360_L494_A0.8670.96
131_Q246_N0.8670.96
213_F240_A0.8660.96
314_R317_A0.8650.96
130_E135_Y0.8640.96
356_I493_V0.8630.96
499_N533_V0.8610.96
58_N62_E0.8590.96
541_E545_K0.8580.96
221_E231_S0.8570.96
522_A525_K0.8570.96
352_A422_K0.8510.96
107_S229_G0.8500.96
463_Q470_F0.8500.96
512_K522_A0.8480.96
131_Q135_Y0.8460.96
522_A526_V0.8450.96
131_Q248_L0.8450.96
536_A539_E0.8450.96
283_L390_E0.8440.96
432_E436_S0.8400.95
457_E471_A0.8390.95
170_E174_H0.8390.95
447_E450_G0.8380.95
185_T230_S0.8380.95
523_A527_L0.8350.95
131_Q249_G0.8340.95
442_M458_K0.8340.95
151_T182_Q0.8320.95
466_K470_F0.8300.95
120_S140_A0.8300.95
84_E89_G0.8260.95
113_G185_T0.8260.95
37_I88_L0.8200.95
440_E444_L0.8200.95
456_Q460_I0.8180.95
366_S408_N0.8180.95
317_A506_A0.8170.95
238_D241_E0.8160.95
284_S376_G0.8160.95
48_D51_P0.8150.95
324_R508_L0.8150.95
103_S109_S0.8150.95
155_S162_A0.8150.95
461_V468_A0.8090.94
45_I49_V0.8080.94
53_I57_E0.8070.94
210_E213_F0.8070.94
110_L113_G0.8060.94
364_F498_S0.8060.94
310_T314_R0.8050.94
504_E508_L0.8050.94
198_K202_D0.8050.94
536_A540_I0.8030.94
443_M446_P0.8020.94
324_R505_S0.8010.94
271_V322_V0.8000.94
281_I312_A0.8000.94
324_R327_G0.7990.94
259_F263_N0.7980.94
437_L500_V0.7960.94
460_I474_L0.7960.94
279_R390_E0.7960.94
449_P454_L0.7950.94
495_D539_E0.7940.94
408_N487_Q0.7920.94
284_S311_M0.7890.94
324_R328_L0.7860.93
280_V284_S0.7860.93
526_V530_E0.7840.93
104_R279_R0.7840.93
457_E474_L0.7820.93
345_R349_K0.7820.93
58_N61_F0.7810.93
167_V200_D0.7790.93
164_T168_L0.7790.93
377_V391_V0.7780.93
399_R402_R0.7780.93
34_H37_I0.7770.93
532_F536_A0.7770.93
352_A426_G0.7760.93
440_E443_M0.7750.93
166_A207_F0.7750.93
111_S186_N0.7750.93
215_G242_V0.7740.93
450_G456_Q0.7720.93
455_E459_Y0.7720.93
495_D543_H0.7720.93
492_N547_S0.7700.93
491_V495_D0.7670.93
49_V102_F0.7660.93
467_I492_N0.7640.92
218_T233_R0.7610.92
413_L486_E0.7610.92
348_A352_A0.7610.92
538_N541_E0.7610.92
364_F494_A0.7600.92
227_I404_F0.7600.92
392_E396_R0.7580.92
39_K43_D0.7540.92
50_L394_A0.7530.92
435_Q462_K0.7530.92
226_G397_D0.7510.92
429_P432_E0.7500.92
49_V52_H0.7490.92
509_R513_A0.7440.91
61_F221_E0.7440.91
243_P246_N0.7430.91
224_K382_G0.7430.91
460_I471_A0.7410.91
329_F354_Y0.7400.91
422_K426_G0.7400.91
52_H56_I0.7400.91
234_T388_E0.7390.91
310_T536_A0.7390.91
282_E286_A0.7360.91
468_A472_A0.7320.91
539_E542_A0.7310.91
347_I350_S0.7290.91
383_Y386_M0.7290.91
40_T74_L0.7290.91
159_A294_F0.7290.91
169_N241_E0.7290.91
525_K529_T0.7270.91
467_I470_F0.7270.91
543_H546_E0.7250.90
437_L440_E0.7240.90
510_T514_I0.7240.90
457_E468_A0.7230.90
540_I543_H0.7220.90
239_Q243_P0.7210.90
449_P453_V0.7200.90
320_S509_R0.7200.90
540_I547_S0.7190.90
163_K167_V0.7190.90
432_E435_Q0.7190.90
370_D398_S0.7190.90
85_Y129_E0.7190.90
380_H389_Y0.7180.90
353_E433_K0.7180.90
168_L171_A0.7160.90
508_L522_A0.7140.90
509_R522_A0.7130.90
120_S139_L0.7110.90
342_K345_R0.7100.89
356_I360_L0.7080.89
321_S501_Y0.7070.89
510_T529_T0.7070.89
50_L53_I0.6970.89
126_F257_I0.6970.89
382_G405_E0.6950.88
309_G312_A0.6950.88
450_G468_A0.6940.88
438_Q442_M0.6930.88
276_A369_L0.6930.88
180_E219_G0.6920.88
42_E47_Q0.6920.88
266_R382_G0.6880.88
454_L458_K0.6880.88
50_L105_A0.6870.88
147_A193_F0.6850.88
452_G534_Q0.6820.88
114_A146_A0.6820.88
314_R371_Y0.6820.88
303_L491_V0.6820.88
273_T369_L0.6810.87
435_Q439_E0.6800.87
478_K481_K0.6800.87
42_E45_I0.6760.87
452_G458_K0.6750.87
428_L469_L0.6730.87
432_E465_K0.6720.87
114_A118_I0.6710.87
497_V501_Y0.6710.87
178_T241_E0.6710.87
543_H547_S0.6710.87
155_S161_G0.6700.87
193_F235_L0.6690.87
373_V398_S0.6690.87
53_I58_N0.6680.86
53_I394_A0.6670.86
41_T74_L0.6670.86
75_G78_G0.6660.86
145_I189_F0.6640.86
374_D378_Q0.6640.86
493_V497_V0.6630.86
400_I404_F0.6630.86
395_Y399_R0.6630.86
204_F255_H0.6600.86
356_I427_E0.6600.86
461_V464_A0.6580.86
286_A289_N0.6570.86
429_P435_Q0.6560.85
151_T291_R0.6550.85
463_Q469_L0.6550.85
43_D48_D0.6540.85
464_A472_A0.6540.85
128_S132_K0.6520.85
225_M391_V0.6500.85
513_A525_K0.6490.85
378_Q399_R0.6470.85
78_G81_V0.6460.85
107_S110_L0.6440.84
56_I229_G0.6440.84
167_V176_V0.6420.84
374_D398_S0.6410.84
311_M315_L0.6410.84
255_H259_F0.6380.84
401_N404_F0.6370.84
434_A461_V0.6360.84
506_A532_F0.6360.84
471_A474_L0.6350.84
183_W232_T0.6350.84
439_E443_M0.6350.84
225_M384_G0.6340.83
542_A546_E0.6340.83
496_I540_I0.6330.83
222_E230_S0.6310.83
179_G193_F0.6300.83
40_T76_L0.6280.83
466_K471_A0.6280.83
499_N537_F0.6270.83
442_M446_P0.6250.83
210_E246_N0.6240.83
164_T167_V0.6240.83
460_I473_G0.6230.82
488_E535_E0.6230.82
123_I248_L0.6210.82
538_N542_A0.6210.82
507_V511_E0.6200.82
303_L306_E0.6190.82
283_L391_V0.6170.82
264_I268_K0.6160.82
277_S373_V0.6130.81
393_R397_D0.6130.81
53_I106_G0.6120.81
377_V380_H0.6120.81
462_K465_K0.6120.81
42_E101_K0.6100.81
183_W222_E0.6090.81
512_K515_A0.6080.81
45_I101_K0.6080.81
280_V394_A0.6080.81
285_A289_N0.6070.81
455_E458_K0.6070.81
515_A522_A0.6070.81
257_I260_N0.6050.81
227_I230_S0.6050.81
393_R396_R0.6030.80
199_V252_G0.6030.80
364_F499_N0.6020.80
506_A509_R0.6020.80
521_K524_Q0.6020.80
318_M364_F0.6020.80
66_R70_K0.6010.80
531_I536_A0.6010.80
92_K95_S0.6000.80
118_I265_G0.6000.80
209_V237_L0.6000.80
460_I472_A0.6000.80
131_Q134_K0.5990.80
452_G530_E0.5980.80
360_L493_V0.5970.80
148_Y265_G0.5970.80
441_L446_P0.5970.80
470_F473_G0.5960.80
199_V247_L0.5920.79
428_L432_E0.5920.79
110_L227_I0.5920.79
368_T372_I0.5910.79
96_A99_T0.5910.79
184_I187_S0.5900.79
349_K353_E0.5890.79
84_E130_E0.5880.79
113_G268_K0.5870.79
500_V504_E0.5860.78
284_S391_V0.5850.78
74_L77_L0.5850.78
224_K232_T0.5850.78
38_A101_K0.5840.78
219_G239_Q0.5830.78
154_G163_K0.5820.78
135_Y192_V0.5790.78
310_T371_Y0.5790.78
431_F434_A0.5790.78
459_Y468_A0.5780.77
121_L264_I0.5770.77
128_S248_L0.5760.77
386_M390_E0.5760.77
163_K179_G0.5760.77
370_D399_R0.5750.77
68_L145_I0.5740.77
187_S193_F0.5740.77
284_S380_H0.5730.77
328_L353_E0.5730.77
177_L209_V0.5710.77
464_A470_F0.5710.77
148_Y262_L0.5710.77
332_N354_Y0.5710.77
444_L447_E0.5700.77
276_A373_V0.5700.77
195_V209_V0.5680.76
465_K473_G0.5670.76
308_I376_G0.5670.76
122_P261_I0.5670.76
111_S145_I0.5660.76
167_V170_E0.5660.76
278_K315_L0.5650.76
184_I400_I0.5650.76
96_A271_V0.5640.76
168_L175_Y0.5640.76
150_L204_F0.5640.76
531_I535_E0.5620.76
40_T44_Y0.5620.76
127_G132_K0.5610.75
124_V132_K0.5610.75
120_S123_I0.5610.75
206_A210_E0.5600.75
311_M375_E0.5600.75
276_A401_N0.5590.75
83_E124_V0.5590.75
216_V240_A0.5580.75
215_G244_K0.5580.75
37_I40_T0.5580.75
467_I474_L0.5570.75
461_V471_A0.5570.75
367_E402_R0.5560.75
355_A358_C0.5560.75
448_E457_E0.5530.74
454_L460_I0.5530.74
44_Y51_P0.5530.74
44_Y47_Q0.5520.74
496_I499_N0.5520.74
503_M507_V0.5510.74
157_S293_Q0.5510.74
288_A298_I0.5500.74
180_E383_Y0.5500.74
178_T240_A0.5490.74
91_D94_S0.5480.74
452_G459_Y0.5480.74
302_S483_I0.5460.73
267_Y358_C0.5460.73
316_Y528_Y0.5430.73
135_Y208_I0.5420.73
49_V105_A0.5420.73
320_S506_A0.5420.73
208_I257_I0.5420.73
371_Y539_E0.5420.73
153_P182_Q0.5420.73
92_K103_S0.5410.73
448_E454_L0.5400.73
463_Q540_I0.5390.72
71_A74_L0.5390.72
47_Q51_P0.5390.72
55_D66_R0.5380.72
413_L487_Q0.5360.72
224_K385_F0.5360.72
81_V85_Y0.5350.72
376_G379_I0.5350.72
437_L444_L0.5340.72
385_F392_E0.5340.72
433_K437_L0.5340.72
462_K469_L0.5330.72
67_L70_K0.5300.71
502_A506_A0.5290.71
196_Y206_A0.5280.71
151_T406_G0.5280.71
101_K104_R0.5270.71
487_Q490_L0.5260.71
227_I272_G0.5250.71
119_G146_A0.5250.71
321_S497_V0.5250.71
437_L442_M0.5240.70
63_H218_T0.5230.70
380_H383_Y0.5220.70
373_V391_V0.5220.70
226_G385_F0.5220.70
328_L331_D0.5220.70
100_E278_K0.5210.70
459_Y462_K0.5190.70
263_N358_C0.5190.70
212_E218_T0.5190.70
135_Y138_G0.5190.70
80_D92_K0.5180.70
463_Q474_L0.5180.70
151_T405_E0.5170.69
54_D387_Q0.5160.69
469_L472_A0.5150.69
498_S502_A0.5150.69
320_S501_Y0.5130.69
59_H63_H0.5130.69
106_G113_G0.5120.69
327_G504_E0.5110.68
368_T491_V0.5110.68
71_A77_L0.5090.68
286_A380_H0.5080.68
537_F541_E0.5080.68
294_F301_F0.5070.68
80_D89_G0.5070.68
77_L81_V0.5060.68
463_Q468_A0.5060.68
145_I186_N0.5060.68
353_E357_E0.5060.68
43_D165_T0.5040.67
104_R107_S0.5030.67
366_S401_N0.5030.67
441_L507_V0.5020.67
310_T313_S0.5020.67
71_A102_F0.5020.67
107_S228_K0.5020.67
160_L198_K0.5020.67
78_G124_V0.5010.67
435_Q438_Q0.5010.67
313_S317_A0.5000.67
224_K405_E0.5000.67
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
3owaA 3 0.9865 100 0.298 Contact Map
2z1qA 2 0.9209 100 0.327 Contact Map
2uxwA 2 0.9057 100 0.334 Contact Map
1w07A 2 0.9343 100 0.363 Contact Map
2ddhA 2 0.899 100 0.378 Contact Map
4y9jA 4 0.8838 100 0.452 Contact Map
2jifA 4 0.633 100 0.478 Contact Map
4l1fA 4 0.6313 100 0.478 Contact Map
2d29A 4 0.6347 100 0.48 Contact Map
1bucA 4 0.6313 100 0.482 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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