SUFB - BACSU - GREMLIN Contacts

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SUFB - FeS cluster assembly protein SufB

UniProt:	O32162	Sequences: MAKKMPDIGEYKYGFHDKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLNSLNFDEITYYVKPSERSERSWDEVPEEIKQTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAQGIVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVETPLQAYFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYTTNSLHSAVVEIIVKKGGYCRYTTIQNWANNVYNLVTKRTVCEENATMEWIDGNIGSKLTMKYPACILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	465 (414)
Sequences:	3187 (1763)
Seq/√Len:	86.7

ECOLI - SUFB SUFD
BACSU - SUFB SUFD
HALSA - Q9HRV6 Q9HRV5
SULSO - Q97ZI1 Q97ZI0

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
193_K	224_S	5.128	1.00
278_C	282_A	4.863	1.00
190_K	221_E	4.757	1.00
219_V	256_C	4.420	1.00
190_K	220_D	4.365	1.00
219_V	223_A	4.206	1.00
252_K	280_E	4.195	1.00
221_E	252_K	3.901	1.00
252_K	279_E	3.732	1.00
253_G	281_N	3.704	1.00
424_S	427_E	3.670	1.00
250_V	254_G	3.522	1.00
319_A	352_G	3.404	1.00
143_F	186_I	3.350	1.00
221_E	251_K	3.334	1.00
337_N	368_G	3.325	1.00
224_S	255_Y	3.307	1.00
276_T	284_M	3.247	1.00
187_Y	220_D	3.202	1.00
307_E	337_N	3.186	1.00
281_N	308_G	3.141	1.00
145_D	148_S	3.089	1.00
425_E	429_T	3.029	1.00
225_V	256_C	2.977	1.00
250_V	284_M	2.973	1.00
250_V	282_A	2.865	1.00
307_E	336_P	2.810	1.00
222_E	253_G	2.809	1.00
248_I	256_C	2.777	1.00
159_E	251_K	2.770	1.00
255_Y	283_T	2.729	1.00
45_Q	49_D	2.660	1.00
332_I	363_G	2.492	1.00
317_A	346_S	2.489	1.00
219_V	254_G	2.408	1.00
277_V	305_K	2.377	1.00
367_E	396_N	2.371	1.00
191_G	222_E	2.358	1.00
368_G	398_N	2.357	1.00
305_K	334_L	2.341	1.00
142_V	187_Y	2.333	1.00
56_E	60_N	2.304	1.00
199_Q	230_G	2.273	1.00
310_R	339_S	2.267	1.00
351_G	383_K	2.228	1.00
333_H	340_S	2.220	1.00
176_N	214_R	2.209	1.00
54_S	177_S	2.186	1.00
353_K	385_T	2.160	1.00
353_K	387_D	2.118	1.00
419_M	425_E	2.085	1.00
280_E	307_E	2.056	1.00
283_T	310_R	2.030	1.00
219_V	225_V	2.030	1.00
348_S	352_G	2.026	1.00
74_N	77_E	2.025	1.00
50_F	177_S	2.016	1.00
164_V	249_I	1.997	1.00
250_V	256_C	1.970	1.00
240_S	268_V	1.932	1.00
217_I	227_Y	1.927	1.00
188_V	225_V	1.924	1.00
372_N	402_E	1.903	1.00
307_E	335_A	1.900	1.00
250_V	278_C	1.835	1.00
198_L	225_V	1.792	1.00
47_M	150_L	1.714	1.00
145_D	182_G	1.708	1.00
293_S	296_T	1.680	1.00
304_L	338_T	1.670	1.00
334_L	363_G	1.642	1.00
139_Q	195_E	1.626	1.00
341_T	370_R	1.619	1.00
98_E	101_Q	1.598	1.00
49_D	53_K	1.577	1.00
142_V	189_P	1.575	1.00
55_L	59_Y	1.570	1.00
319_A	325_Q	1.552	1.00
322_G	351_G	1.547	1.00
147_D	182_G	1.545	1.00
120_S	127_V	1.543	1.00
303_I	332_I	1.528	1.00
309_A	335_A	1.516	1.00
367_E	398_N	1.506	1.00
48_L	52_L	1.503	1.00
308_G	337_N	1.494	1.00
165_I	245_V	1.476	0.99
280_E	308_G	1.465	0.99
162_A	247_E	1.458	0.99
410_V	432_I	1.449	0.99
369_A	399_I	1.438	0.99
335_A	338_T	1.431	0.99
309_A	338_T	1.422	0.99
362_F	401_L	1.405	0.99
258_Y	284_M	1.402	0.99
57_H	60_N	1.395	0.99
141_I	188_V	1.386	0.99
187_Y	218_I	1.380	0.99
321_K	350_Q	1.362	0.99
375_C	388_T	1.350	0.99
339_S	370_R	1.348	0.99
279_E	305_K	1.340	0.99
315_S	344_S	1.319	0.99
163_K	249_I	1.310	0.99
148_S	152_E	1.308	0.99
354_V	386_S	1.287	0.98
53_K	56_E	1.286	0.98
252_K	281_N	1.281	0.98
388_T	405_A	1.276	0.98
46_W	158_R	1.272	0.98
56_E	59_Y	1.261	0.98
42_E	151_K	1.256	0.98
112_E	196_T	1.251	0.98
324_H	355_T	1.248	0.98
154_E	158_R	1.239	0.98
316_I	437_I	1.237	0.98
278_C	284_M	1.234	0.98
360_V	371_S	1.230	0.98
149_A	185_F	1.230	0.98
117_A	128_V	1.227	0.98
362_F	369_A	1.215	0.98
226_H	257_R	1.212	0.98
357_R	389_I	1.206	0.98
188_V	219_V	1.199	0.98
279_E	306_G	1.198	0.98
223_A	256_C	1.196	0.98
193_K	222_E	1.195	0.98
120_S	205_N	1.192	0.98
327_A	344_S	1.184	0.97
63_M	172_F	1.183	0.97
226_H	259_T	1.183	0.97
202_F	231_C	1.174	0.97
57_H	61_M	1.166	0.97
162_A	176_N	1.161	0.97
53_K	57_H	1.154	0.97
264_W	270_N	1.147	0.97
160_H	218_I	1.143	0.97
302_C	311_G	1.141	0.97
444_L	449_A	1.141	0.97
123_Y	128_V	1.140	0.97
303_I	334_L	1.135	0.97
348_S	386_S	1.132	0.97
50_F	53_K	1.126	0.96
194_V	225_V	1.123	0.96
347_I	437_I	1.119	0.96
186_I	198_L	1.119	0.96
365_K	396_N	1.108	0.96
366_A	369_A	1.102	0.96
189_P	192_V	1.090	0.96
45_Q	48_L	1.081	0.96
76_D	324_H	1.074	0.95
176_N	245_V	1.065	0.95
203_R	232_T	1.062	0.95
355_T	389_I	1.056	0.95
394_I	399_I	1.054	0.95
295_L	324_H	1.053	0.95
256_C	284_M	1.047	0.95
279_E	282_A	1.044	0.95
144_K	148_S	1.043	0.95
253_G	308_G	1.037	0.94
287_I	314_L	1.030	0.94
57_H	167_P	1.030	0.94
141_I	192_V	1.029	0.94
423_I	431_M	1.028	0.94
449_A	453_N	1.027	0.94
118_G	123_Y	1.026	0.94
278_C	302_C	1.024	0.94
251_K	279_E	1.022	0.94
218_I	249_I	1.022	0.94
97_E	101_Q	1.018	0.94
144_K	152_E	1.017	0.94
191_G	253_G	1.014	0.94
299_Y	328_G	1.009	0.94
162_A	214_R	1.004	0.93
144_K	149_A	1.004	0.93
361_H	395_L	1.002	0.93
138_A	141_I	1.000	0.93
47_M	180_W	0.998	0.93
360_V	369_A	0.996	0.93
298_K	327_A	0.991	0.93
277_V	303_I	0.988	0.93
289_G	452_M	0.987	0.93
280_E	306_G	0.987	0.93
142_V	185_F	0.984	0.93
76_D	295_L	0.981	0.93
377_T	388_T	0.979	0.93
212_F	243_S	0.979	0.93
336_P	367_E	0.978	0.92
229_E	258_Y	0.976	0.92
308_G	335_A	0.967	0.92
392_N	401_L	0.965	0.92
146_T	150_L	0.962	0.92
143_F	198_L	0.958	0.92
52_L	56_E	0.955	0.92
257_R	285_E	0.952	0.91
62_P	171_K	0.950	0.91
388_T	407_V	0.949	0.91
214_R	245_V	0.949	0.91
124_E	127_V	0.949	0.91
302_C	313_T	0.939	0.91
140_G	192_V	0.938	0.91
220_D	251_K	0.936	0.91
160_H	249_I	0.930	0.90
304_L	335_A	0.927	0.90
247_E	275_R	0.926	0.90
258_Y	286_W	0.923	0.90
342_I	360_V	0.921	0.90
278_C	311_G	0.916	0.90
117_A	120_S	0.916	0.90
332_I	361_H	0.915	0.90
58_F	171_K	0.909	0.89
188_V	194_V	0.904	0.89
373_I	392_N	0.903	0.89
161_W	180_W	0.900	0.89
202_F	229_E	0.899	0.89
104_D	113_Q	0.898	0.89
338_T	369_A	0.895	0.89
215_T	246_V	0.888	0.88
177_S	214_R	0.888	0.88
362_F	373_I	0.888	0.88
149_A	157_F	0.886	0.88
161_W	216_L	0.886	0.88
47_M	161_W	0.885	0.88
122_Q	125_S	0.883	0.88
362_F	393_E	0.882	0.88
328_G	357_R	0.882	0.88
73_L	76_D	0.882	0.88
260_T	272_V	0.872	0.87
380_M	416_F	0.869	0.87
348_S	354_V	0.867	0.87
359_I	393_E	0.864	0.87
394_I	398_N	0.864	0.87
65_Q	68_G	0.863	0.87
373_I	401_L	0.862	0.87
118_G	121_A	0.858	0.87
320_G	350_Q	0.858	0.87
351_G	384_S	0.856	0.86
170_N	299_Y	0.853	0.86
95_V	100_K	0.850	0.86
219_V	250_V	0.845	0.86
217_I	248_I	0.845	0.86
324_H	353_K	0.845	0.86
294_K	322_G	0.844	0.86
160_H	216_L	0.843	0.86
202_F	215_T	0.841	0.85
392_N	399_I	0.836	0.85
213_E	244_A	0.834	0.85
108_I	111_A	0.833	0.85
153_N	185_F	0.827	0.84
216_L	249_I	0.822	0.84
74_N	78_I	0.821	0.84
49_D	52_L	0.820	0.84
231_C	270_N	0.820	0.84
396_N	399_I	0.819	0.84
216_L	247_E	0.816	0.84
57_H	168_T	0.813	0.83
418_L	432_I	0.811	0.83
190_K	252_K	0.810	0.83
75_F	172_F	0.810	0.83
189_P	218_I	0.807	0.83
309_A	336_P	0.807	0.83
141_I	194_V	0.806	0.83
296_T	325_Q	0.805	0.83
370_R	400_S	0.804	0.83
349_K	381_D	0.800	0.82
153_N	156_I	0.800	0.82
188_V	223_A	0.800	0.82
260_T	270_N	0.799	0.82
320_G	323_Q	0.797	0.82
357_R	391_Y	0.796	0.82
391_Y	395_L	0.795	0.82
221_E	253_G	0.791	0.82
359_I	391_Y	0.791	0.82
260_T	264_W	0.790	0.82
71_N	297_M	0.789	0.82
253_G	280_E	0.787	0.81
362_F	370_R	0.783	0.81
292_G	296_T	0.781	0.81
117_A	121_A	0.779	0.81
342_I	345_K	0.778	0.81
391_Y	402_E	0.776	0.81
299_Y	357_R	0.775	0.80
334_L	365_K	0.774	0.80
204_I	211_Q	0.772	0.80
116_L	121_A	0.771	0.80
123_Y	127_V	0.769	0.80
362_F	394_I	0.768	0.80
191_G	221_E	0.768	0.80
229_E	260_T	0.764	0.79
146_T	157_F	0.758	0.79
378_L	433_V	0.756	0.79
348_S	384_S	0.756	0.79
329_A	342_I	0.756	0.79
185_F	218_I	0.755	0.79
368_G	396_N	0.754	0.79
304_L	408_S	0.751	0.78
54_S	174_A	0.751	0.78
162_A	216_L	0.749	0.78
170_N	273_T	0.747	0.78
319_A	348_S	0.747	0.78
351_G	381_D	0.747	0.78
329_A	344_S	0.745	0.78
163_K	247_E	0.745	0.78
262_Q	323_Q	0.745	0.78
121_A	124_E	0.742	0.77
305_K	335_A	0.739	0.77
328_G	377_T	0.739	0.77
51_R	174_A	0.736	0.77
217_I	225_V	0.736	0.77
50_F	158_R	0.733	0.77
347_I	378_L	0.729	0.76
330_K	361_H	0.729	0.76
172_F	271_L	0.725	0.76
214_R	247_E	0.721	0.75
335_A	365_K	0.720	0.75
122_Q	129_Y	0.719	0.75
99_I	103_F	0.717	0.75
313_T	331_M	0.716	0.75
367_E	397_D	0.716	0.75
378_L	385_T	0.715	0.75
104_D	282_A	0.714	0.75
125_S	128_V	0.711	0.74
369_A	401_L	0.710	0.74
394_I	401_L	0.709	0.74
119_V	123_Y	0.709	0.74
118_G	202_F	0.707	0.74
423_I	428_A	0.707	0.74
410_V	429_T	0.706	0.74
337_N	367_E	0.705	0.74
120_S	124_E	0.704	0.74
54_S	167_P	0.704	0.74
248_I	284_M	0.704	0.74
402_E	408_S	0.702	0.74
175_L	447_E	0.702	0.74
197_P	378_L	0.702	0.74
55_L	179_V	0.701	0.73
162_A	177_S	0.700	0.73
350_Q	381_D	0.700	0.73
240_S	264_W	0.700	0.73
273_T	301_A	0.699	0.73
314_L	443_E	0.699	0.73
298_K	344_S	0.698	0.73
177_S	245_V	0.698	0.73
276_T	302_C	0.691	0.72
118_G	128_V	0.688	0.72
396_N	406_K	0.684	0.72
366_A	396_N	0.684	0.72
318_L	349_K	0.683	0.71
274_K	298_K	0.683	0.71
251_K	282_A	0.682	0.71
207_E	238_T	0.681	0.71
96_P	140_G	0.680	0.71
257_R	445_P	0.680	0.71
252_K	282_A	0.677	0.71
359_I	373_I	0.677	0.71
280_E	337_N	0.676	0.71
364_R	383_K	0.675	0.71
126_E	198_L	0.674	0.70
357_R	386_S	0.673	0.70
100_K	103_F	0.670	0.70
371_S	401_L	0.669	0.70
242_H	264_W	0.669	0.70
252_K	308_G	0.669	0.70
364_R	395_L	0.666	0.70
326_D	357_R	0.664	0.69
318_L	456_I	0.663	0.69
438_E	453_N	0.662	0.69
406_K	439_P	0.660	0.69
362_F	399_I	0.660	0.69
276_T	282_A	0.660	0.69
278_C	309_A	0.659	0.69
346_S	354_V	0.658	0.69
160_H	185_F	0.658	0.69
371_S	377_T	0.657	0.69
144_K	153_N	0.655	0.68
95_V	103_F	0.655	0.68
121_A	127_V	0.653	0.68
189_P	220_D	0.653	0.68
302_C	408_S	0.653	0.68
274_K	300_P	0.652	0.68
78_I	81_Y	0.651	0.68
157_F	185_F	0.650	0.68
237_T	267_N	0.650	0.68
344_S	356_Y	0.650	0.68
312_M	341_T	0.649	0.68
304_L	309_A	0.649	0.68
381_D	384_S	0.646	0.67
331_M	340_S	0.645	0.67
334_L	361_H	0.644	0.67
66_W	77_E	0.643	0.67
262_Q	292_G	0.642	0.67
401_L	404_E	0.641	0.67
313_T	371_S	0.640	0.66
418_L	423_I	0.639	0.66
53_K	167_P	0.639	0.66
119_V	205_N	0.638	0.66
156_I	159_E	0.637	0.66
176_N	243_S	0.637	0.66
389_I	402_E	0.635	0.66
111_A	114_K	0.635	0.66
139_Q	194_V	0.634	0.66
447_E	450_V	0.634	0.66
368_G	397_D	0.634	0.66
262_Q	288_D	0.632	0.66
315_S	327_A	0.631	0.65
121_A	128_V	0.630	0.65
120_S	128_V	0.630	0.65
149_A	153_N	0.629	0.65
188_V	227_Y	0.629	0.65
333_H	363_G	0.629	0.65
114_K	196_T	0.628	0.65
367_E	400_S	0.628	0.65
183_G	215_T	0.627	0.65
149_A	156_I	0.626	0.65
284_M	302_C	0.624	0.65
395_L	408_S	0.624	0.65
369_A	396_N	0.623	0.64
275_R	405_A	0.622	0.64
394_I	397_D	0.621	0.64
246_V	258_Y	0.620	0.64
371_S	375_C	0.619	0.64
146_T	185_F	0.619	0.64
364_R	367_E	0.619	0.64
43_E	52_L	0.618	0.64
308_G	339_S	0.618	0.64
214_R	408_S	0.615	0.63
150_L	157_F	0.615	0.63
156_I	185_F	0.614	0.63
310_R	341_T	0.612	0.63
115_Y	128_V	0.612	0.63
174_A	247_E	0.609	0.63
262_Q	293_S	0.608	0.63
43_E	48_L	0.607	0.62
307_E	368_G	0.606	0.62
71_N	74_N	0.605	0.62
225_V	250_V	0.605	0.62
150_L	161_W	0.604	0.62
132_M	139_Q	0.602	0.62
45_Q	85_S	0.601	0.62
210_G	345_K	0.601	0.62
246_V	287_I	0.601	0.62
318_L	459_E	0.601	0.62
138_A	195_E	0.600	0.62
58_F	62_P	0.599	0.61
54_S	57_H	0.598	0.61
249_I	277_V	0.598	0.61
119_V	127_V	0.597	0.61
272_V	288_D	0.597	0.61
108_I	217_I	0.596	0.61
50_F	54_S	0.596	0.61
376_D	406_K	0.596	0.61
406_K	437_I	0.595	0.61
42_E	45_Q	0.595	0.61
132_M	137_E	0.593	0.61
353_K	384_S	0.592	0.61
346_S	375_C	0.592	0.61
249_I	279_E	0.591	0.60
140_G	189_P	0.590	0.60
119_V	128_V	0.590	0.60
266_N	321_K	0.589	0.60
57_H	62_P	0.589	0.60
408_S	411_S	0.588	0.60
156_I	187_Y	0.588	0.60
438_E	442_K	0.587	0.60
454_R	457_K	0.587	0.60
401_L	411_S	0.586	0.60
184_S	215_T	0.585	0.60
324_H	344_S	0.585	0.60
336_P	342_I	0.585	0.60
377_T	409_K	0.584	0.59
452_M	460_M	0.584	0.59
379_I	389_I	0.584	0.59
149_A	183_G	0.581	0.59
108_I	113_Q	0.581	0.59
169_D	275_R	0.580	0.59
231_C	260_T	0.578	0.59
204_I	242_H	0.576	0.58
94_E	98_E	0.576	0.58
336_P	366_A	0.575	0.58
328_G	437_I	0.574	0.58
328_G	388_T	0.574	0.58
262_Q	290_N	0.573	0.58
223_A	254_G	0.568	0.57
217_I	409_K	0.568	0.57
358_G	393_E	0.568	0.57
227_Y	246_V	0.567	0.57
56_E	207_E	0.567	0.57
80_Y	203_R	0.566	0.57
186_I	255_Y	0.565	0.57
141_I	225_V	0.565	0.57
252_K	309_A	0.565	0.57
193_K	310_R	0.564	0.57
153_N	160_H	0.562	0.57
58_F	174_A	0.562	0.57
298_K	408_S	0.561	0.56
320_G	349_K	0.558	0.56
259_T	445_P	0.558	0.56
199_Q	407_V	0.558	0.56
171_K	174_A	0.558	0.56
405_A	433_V	0.557	0.56
403_H	417_Y	0.557	0.56
279_E	309_A	0.557	0.56
343_V	374_E	0.556	0.56
142_V	160_H	0.556	0.56
204_I	268_V	0.555	0.56
116_L	120_S	0.555	0.56
146_T	180_W	0.553	0.55
328_G	371_S	0.553	0.55
62_P	71_N	0.553	0.55
328_G	375_C	0.552	0.55
42_E	57_H	0.551	0.55
175_L	212_F	0.550	0.55
357_R	377_T	0.550	0.55
333_H	395_L	0.549	0.55
230_G	263_N	0.548	0.55
300_P	303_I	0.548	0.55
327_A	388_T	0.547	0.55
288_D	300_P	0.546	0.54
160_H	247_E	0.546	0.54
290_N	298_K	0.546	0.54
309_A	334_L	0.545	0.54
206_S	209_M	0.544	0.54
231_C	242_H	0.544	0.54
141_I	230_G	0.544	0.54
375_C	404_E	0.543	0.54
44_P	150_L	0.542	0.54
396_N	404_E	0.542	0.54
195_E	217_I	0.541	0.54
291_I	459_E	0.541	0.54
197_P	226_H	0.541	0.54
389_I	397_D	0.539	0.54
71_N	367_E	0.539	0.54
285_E	312_M	0.539	0.54
103_F	121_A	0.538	0.53
277_V	302_C	0.538	0.53
418_L	459_E	0.537	0.53
297_M	404_E	0.536	0.53
51_R	54_S	0.536	0.53
175_L	179_V	0.535	0.53
399_I	421_R	0.535	0.53
121_A	125_S	0.534	0.53
247_E	306_G	0.533	0.53
362_F	397_D	0.532	0.53
52_L	91_S	0.532	0.53
193_K	255_Y	0.532	0.53
191_G	334_L	0.531	0.52
300_P	433_V	0.530	0.52
161_W	292_G	0.530	0.52
160_H	251_K	0.528	0.52
281_N	307_E	0.528	0.52
251_K	254_G	0.528	0.52
72_S	269_Y	0.527	0.52
342_I	369_A	0.526	0.52
97_E	100_K	0.525	0.52
242_H	270_N	0.525	0.52
393_E	396_N	0.525	0.52
254_G	282_A	0.525	0.52
416_F	420_S	0.525	0.52
124_E	205_N	0.524	0.51
137_E	140_G	0.524	0.51
441_T	456_I	0.523	0.51
202_F	414_Q	0.523	0.51
340_S	360_V	0.522	0.51
317_A	409_K	0.522	0.51
248_I	276_T	0.520	0.51
96_P	99_I	0.520	0.51
127_V	228_V	0.519	0.51
333_H	393_E	0.519	0.51
396_N	401_L	0.518	0.51
350_Q	380_M	0.518	0.51
371_S	392_N	0.518	0.51
342_I	373_I	0.518	0.51
220_D	223_A	0.518	0.51
301_A	330_K	0.517	0.51
299_Y	373_I	0.517	0.51
297_M	396_N	0.516	0.50
132_M	141_I	0.516	0.50
328_G	344_S	0.516	0.50
350_Q	384_S	0.516	0.50
345_K	456_I	0.515	0.50
54_S	178_A	0.515	0.50
103_F	106_L	0.515	0.50
104_D	107_G	0.514	0.50
94_E	100_K	0.513	0.50
59_Y	150_L	0.513	0.50
119_V	203_R	0.513	0.50
397_D	400_S	0.512	0.50
233_A	240_S	0.512	0.50
98_E	208_N	0.512	0.50
297_M	326_D	0.511	0.50
93_D	424_S	0.511	0.50
323_Q	350_Q	0.511	0.50
377_T	389_I	0.510	0.50
50_F	167_P	0.510	0.50
120_S	130_H	0.510	0.50
356_Y	389_I	0.510	0.50
290_N	317_A	0.510	0.50
273_T	299_Y	0.509	0.49
186_I	239_N	0.509	0.49
201_Y	234_P	0.508	0.49
379_I	386_S	0.508	0.49
86_E	241_L	0.508	0.49
361_H	393_E	0.507	0.49
434_M	457_K	0.507	0.49
322_G	350_Q	0.507	0.49
270_N	296_T	0.507	0.49
281_N	458_F	0.506	0.49
340_S	371_S	0.506	0.49
195_E	226_H	0.506	0.49
221_E	282_A	0.505	0.49
49_D	60_N	0.505	0.49
55_L	148_S	0.505	0.49
83_K	331_M	0.505	0.49
271_L	297_M	0.505	0.49
317_A	327_A	0.504	0.49
169_D	173_A	0.504	0.49
53_K	168_T	0.504	0.49
82_V	341_T	0.503	0.49
350_Q	458_F	0.502	0.49
91_S	447_E	0.501	0.48
207_E	236_Y	0.500	0.48

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1vh4A	2	0.8796	100	0.236	Contact Map
4dn7A	2	0.871	100	0.31	Contact Map
4xfmA	2	0.1527	63.9	0.969	Contact Map
3dqqA	2	0.1634	43.4	0.972	Contact Map
1yzyA	1	0.1548	33.8	0.974	Contact Map
1rq8A	1	0.1183	24.8	0.976	Contact Map
3uknA	2	0.1118	24.5	0.976	Contact Map
4xg0A	2	0.157	18.7	0.977	Contact Map
1ifyA	1	0.0925	17.4	0.977	Contact Map
4edgA	1	0.1742	16.8	0.978	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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