ALLC - BACSU - GREMLIN Contacts

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ALLC - Allantoate amidohydrolase

UniProt:	O32149	Sequences: MEKQKLSVKNSITDYIEWLAQYGASADGGVTRLLYTKEWMDAQLAVKTEMSSFGLETRFDDVGNVFGRLSGTQSPDEVIVTGSHIDTVINGGKYDGAYGVLAAMLALKQLKETYGAPKKTLEAVSLCEEEGSRFPMTYWGSGNMTGVFSEQDAKEPRDESGVSLQTAMHESGFGKGVFQSAYRTDISAFVELHIEQGKTLEMSGRDLGIVTSIAGQRRYLVTLEGECNHAGTTSMKWRKDPLAASSRIIHELLLRSDELPDELRLTCGKITAEPNVANVIPGRVQFSIDIRHQHQHVLEQFHQDMVALINGICLQKGIRAVIDEYMRIEPVPMDERLKAAAFETALENGFSCEEMVSGAGHDAQMIGRRYPACMLFVPSRGGVSHSPKEYTSARQLEIGVRALTDLLYKLAY	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	412 (396)
Sequences:	4196 (3086)
Seq/√Len:	155.1

ECOLI - ALLC YGEY DAPE ABGA
BACSU - ALLC PEPVL AMHX FAPD YODQ YHAA YQJE PEPT YTNL
SULSO - Q97VB6 Q97Y12 CBPX2 CBPX1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
244_A	318_I	4.074	1.00
342_F	354_E	3.659	1.00
50_M	67_G	3.560	1.00
68_R	122_E	3.395	1.00
253_L	316_K	3.004	1.00
203_S	353_E	2.932	1.00
379_S	391_T	2.923	1.00
81_T	103_A	2.896	1.00
347_E	405_D	2.847	1.00
45_A	49_E	2.832	1.00
81_T	407_L	2.761	1.00
223_L	248_I	2.733	1.00
343_E	409_K	2.657	1.00
162_V	167_A	2.635	1.00
98_Y	396_L	2.598	1.00
15_Y	108_K	2.584	1.00
40_M	44_L	2.532	1.00
348_N	405_D	2.495	1.00
47_K	65_V	2.366	1.00
69_L	117_P	2.226	1.00
47_K	51_S	2.208	1.00
226_E	239_K	2.187	1.00
38_E	41_D	2.145	1.00
347_E	409_K	2.118	1.00
69_L	111_K	2.116	1.00
11_S	105_L	2.111	1.00
341_A	406_L	2.098	1.00
163_S	166_T	2.097	1.00
73_Q	118_K	2.079	1.00
72_T	118_K	2.058	1.00
53_F	104_M	2.047	1.00
247_R	315_Q	2.027	1.00
211_T	354_E	2.023	1.00
380_R	390_Y	2.009	1.00
107_L	123_A	1.982	1.00
106_A	407_L	1.964	1.00
377_V	391_T	1.955	1.00
273_E	283_R	1.951	1.00
45_A	48_T	1.940	1.00
37_K	41_D	1.914	1.00
9_K	397_E	1.899	1.00
109_Q	113_T	1.896	1.00
383_V	386_S	1.895	1.00
251_E	308_L	1.885	1.00
222_T	283_R	1.884	1.00
391_T	396_L	1.870	1.00
18_W	45_A	1.861	1.00
263_L	301_F	1.852	1.00
167_A	170_E	1.851	1.00
37_K	170_E	1.841	1.00
14_D	18_W	1.820	1.00
334_D	371_P	1.813	1.00
247_R	316_K	1.807	1.00
337_L	373_C	1.788	1.00
65_V	125_S	1.786	1.00
342_F	346_L	1.784	1.00
119_K	187_S	1.762	1.00
12_I	400_V	1.759	1.00
311_G	315_Q	1.746	1.00
220_L	323_D	1.729	1.00
49_E	52_S	1.727	1.00
390_Y	393_A	1.712	1.00
224_E	283_R	1.707	1.00
109_Q	404_T	1.688	1.00
56_E	70_S	1.679	1.00
46_V	85_I	1.663	1.00
308_L	311_G	1.651	1.00
271_T	285_Q	1.651	1.00
12_I	101_L	1.640	1.00
10_N	14_D	1.630	1.00
78_V	120_T	1.621	1.00
94_Y	390_Y	1.617	1.00
110_L	115_G	1.615	1.00
48_T	52_S	1.589	1.00
44_L	173_F	1.586	1.00
248_I	309_I	1.563	1.00
295_Q	330_P	1.561	1.00
379_S	395_Q	1.554	1.00
302_H	306_V	1.551	1.00
48_T	51_S	1.546	1.00
80_V	124_V	1.540	1.00
341_A	375_L	1.531	1.00
224_E	319_R	1.506	1.00
73_Q	76_D	1.500	1.00
81_T	106_A	1.484	1.00
18_W	21_Q	1.480	1.00
223_L	286_F	1.478	1.00
29_G	32_R	1.462	1.00
344_T	402_A	1.460	1.00
228_N	233_T	1.456	1.00
13_T	17_E	1.453	1.00
340_A	409_K	1.452	1.00
190_V	406_L	1.445	1.00
70_S	120_T	1.442	1.00
139_W	142_G	1.440	1.00
303_Q	307_A	1.438	1.00
206_D	351_S	1.432	1.00
55_L	69_L	1.431	1.00
207_L	402_A	1.429	1.00
50_M	104_M	1.416	1.00
202_M	237_W	1.416	1.00
46_V	67_G	1.413	1.00
258_E	304_D	1.412	1.00
47_K	57_T	1.405	1.00
83_S	100_V	1.405	1.00
109_Q	401_R	1.404	1.00
23_G	38_E	1.403	1.00
338_K	354_E	1.400	1.00
76_D	119_K	1.395	1.00
206_D	395_Q	1.389	1.00
80_V	186_I	1.389	1.00
111_K	117_P	1.378	1.00
247_R	254_L	1.366	1.00
102_A	400_V	1.363	1.00
85_I	125_S	1.362	1.00
72_T	116_A	1.359	1.00
251_E	254_L	1.357	1.00
306_V	310_N	1.355	1.00
307_A	311_G	1.344	1.00
62_V	143_N	1.334	1.00
242_L	270_I	1.333	1.00
55_L	107_L	1.322	1.00
147_V	368_R	1.320	1.00
230_A	266_T	1.313	1.00
139_W	164_L	1.303	1.00
81_T	190_V	1.302	1.00
220_L	285_Q	1.301	1.00
184_T	190_V	1.300	1.00
110_L	117_P	1.294	1.00
363_A	372_A	1.291	1.00
187_S	190_V	1.288	1.00
224_E	321_V	1.288	1.00
184_T	187_S	1.283	1.00
15_Y	105_L	1.282	1.00
242_L	284_V	1.279	1.00
87_T	97_A	1.275	1.00
241_P	284_V	1.275	1.00
245_S	249_I	1.271	1.00
186_I	190_V	1.265	1.00
20_A	93_K	1.265	1.00
263_L	292_H	1.264	1.00
222_T	285_Q	1.262	1.00
243_A	253_L	1.261	1.00
397_E	401_R	1.253	1.00
248_I	286_F	1.248	1.00
108_K	112_E	1.242	1.00
39_W	43_Q	1.239	1.00
133_R	158_D	1.235	1.00
189_F	363_A	1.231	1.00
256_S	265_L	1.227	1.00
344_T	409_K	1.225	1.00
47_K	59_F	1.223	1.00
128_E	131_G	1.218	1.00
222_T	321_V	1.215	1.00
77_E	119_K	1.214	1.00
15_Y	49_E	1.208	1.00
380_R	392_S	1.198	1.00
405_D	409_K	1.196	1.00
249_I	270_I	1.194	1.00
158_D	162_V	1.190	1.00
22_Y	45_A	1.184	1.00
242_L	272_A	1.178	1.00
199_T	234_S	1.178	1.00
247_R	250_H	1.175	1.00
324_E	327_R	1.172	1.00
346_L	352_C	1.171	1.00
205_R	353_E	1.164	1.00
243_A	249_I	1.157	1.00
79_I	188_A	1.150	1.00
107_L	121_L	1.145	1.00
300_Q	304_D	1.145	1.00
19_L	42_A	1.142	1.00
234_S	237_W	1.141	1.00
272_A	284_V	1.135	1.00
245_S	270_I	1.134	1.00
13_T	393_A	1.129	1.00
166_T	169_H	1.128	1.00
252_L	265_L	1.115	1.00
107_L	111_K	1.115	1.00
22_Y	42_A	1.112	1.00
174_G	177_V	1.102	0.99
69_L	107_L	1.102	0.99
341_A	373_C	1.100	0.99
17_E	21_Q	1.092	0.99
206_D	398_I	1.083	0.99
295_Q	329_E	1.081	0.99
46_V	50_M	1.079	0.99
226_E	383_V	1.064	0.99
35_Y	63_G	1.057	0.99
223_L	245_S	1.049	0.99
223_L	320_A	1.046	0.99
212_S	293_Q	1.042	0.99
66_F	80_V	1.033	0.99
178_F	181_A	1.033	0.99
401_R	405_D	1.031	0.99
379_S	392_S	1.029	0.99
71_G	120_T	1.028	0.99
98_Y	192_L	1.028	0.99
66_F	124_V	1.027	0.99
79_I	119_K	1.026	0.99
18_W	49_E	1.019	0.99
169_H	175_K	1.015	0.99
233_T	280_I	1.012	0.99
44_L	47_K	1.009	0.99
53_F	108_K	1.008	0.99
249_I	267_C	1.006	0.99
33_L	40_M	1.000	0.99
346_L	351_S	1.000	0.99
46_V	125_S	0.994	0.99
138_Y	365_M	0.993	0.99
183_R	186_I	0.993	0.99
377_V	399_G	0.991	0.99
104_M	123_A	0.989	0.99
23_G	90_N	0.987	0.99
350_F	398_I	0.986	0.99
149_S	152_D	0.982	0.99
345_A	402_A	0.982	0.99
254_L	258_E	0.979	0.99
106_A	404_T	0.976	0.99
157_R	163_S	0.974	0.99
165_Q	169_H	0.971	0.99
115_G	408_Y	0.970	0.99
64_N	140_G	0.970	0.99
239_K	319_R	0.970	0.99
41_D	44_L	0.963	0.99
299_E	327_R	0.960	0.99
153_A	399_G	0.958	0.99
37_K	167_A	0.957	0.99
138_Y	142_G	0.950	0.98
338_K	373_C	0.950	0.98
392_S	395_Q	0.948	0.98
46_V	123_A	0.948	0.98
209_I	341_A	0.943	0.98
309_I	320_A	0.941	0.98
89_I	276_V	0.941	0.98
64_N	67_G	0.937	0.98
178_F	182_Y	0.934	0.98
40_M	171_S	0.929	0.98
39_W	127_C	0.927	0.98
102_A	192_L	0.927	0.98
344_T	405_D	0.927	0.98
150_E	154_K	0.927	0.98
186_I	370_Y	0.922	0.98
245_S	286_F	0.922	0.98
344_T	348_N	0.920	0.98
13_T	94_Y	0.914	0.98
21_Q	24_A	0.911	0.98
343_E	347_E	0.911	0.98
16_I	20_A	0.908	0.98
219_Y	302_H	0.907	0.98
9_K	394_R	0.906	0.98
192_L	399_G	0.906	0.98
400_V	404_T	0.906	0.98
205_R	351_S	0.905	0.98
335_E	339_A	0.897	0.98
333_M	372_A	0.896	0.98
102_A	403_L	0.895	0.98
308_L	312_I	0.893	0.98
348_N	401_R	0.891	0.98
68_R	78_V	0.886	0.98
23_G	28_G	0.884	0.97
196_Q	207_L	0.883	0.97
68_R	120_T	0.880	0.97
339_A	343_E	0.873	0.97
252_L	286_F	0.866	0.97
19_L	97_A	0.861	0.97
221_V	288_I	0.858	0.97
338_K	342_F	0.856	0.97
398_I	401_R	0.853	0.97
67_G	70_S	0.852	0.97
295_Q	299_E	0.848	0.97
33_L	36_T	0.848	0.97
190_V	193_H	0.845	0.97
133_R	365_M	0.844	0.97
69_L	110_L	0.843	0.97
383_V	388_K	0.842	0.97
394_R	398_I	0.839	0.97
366_I	370_Y	0.838	0.97
22_Y	41_D	0.837	0.97
43_Q	65_V	0.835	0.96
292_H	297_V	0.834	0.96
166_T	170_E	0.830	0.96
102_A	399_G	0.830	0.96
221_V	322_I	0.827	0.96
34_L	39_W	0.821	0.96
44_L	48_T	0.812	0.96
145_T	369_R	0.810	0.96
14_D	17_E	0.809	0.96
201_E	381_G	0.807	0.96
272_A	275_N	0.806	0.96
19_L	46_V	0.805	0.96
228_N	280_I	0.803	0.96
154_K	165_Q	0.802	0.96
69_L	116_A	0.800	0.96
138_Y	141_S	0.799	0.95
85_I	97_A	0.798	0.95
374_M	384_S	0.796	0.95
145_T	366_I	0.793	0.95
223_L	318_I	0.792	0.95
340_A	344_T	0.790	0.95
165_Q	168_M	0.787	0.95
49_E	53_F	0.784	0.95
77_E	187_S	0.784	0.95
255_R	304_D	0.783	0.95
288_I	305_M	0.783	0.95
149_S	153_A	0.781	0.95
263_L	297_V	0.780	0.95
142_G	148_F	0.779	0.95
35_Y	127_C	0.779	0.95
164_L	167_A	0.778	0.95
273_E	285_Q	0.778	0.95
58_R	66_F	0.776	0.95
196_Q	199_T	0.767	0.94
143_N	153_A	0.765	0.94
60_D	64_N	0.765	0.94
186_I	189_F	0.757	0.94
297_V	300_Q	0.757	0.94
27_D	32_R	0.757	0.94
17_E	93_K	0.757	0.94
88_V	126_L	0.755	0.94
55_L	104_M	0.755	0.94
345_A	352_C	0.753	0.94
303_Q	306_V	0.752	0.94
187_S	192_L	0.748	0.94
50_M	57_T	0.748	0.94
245_S	267_C	0.747	0.94
57_T	65_V	0.746	0.94
340_A	343_E	0.745	0.93
219_Y	322_I	0.744	0.93
126_L	189_F	0.743	0.93
27_D	387_P	0.738	0.93
158_D	356_V	0.737	0.93
221_V	286_F	0.737	0.93
307_A	310_N	0.737	0.93
299_E	303_Q	0.736	0.93
183_R	188_A	0.734	0.93
185_D	188_A	0.733	0.93
199_T	203_S	0.732	0.93
43_Q	127_C	0.731	0.93
290_I	301_F	0.731	0.93
269_K	287_S	0.729	0.93
255_R	308_L	0.729	0.93
222_T	323_D	0.729	0.93
244_A	312_I	0.728	0.93
70_S	75_P	0.728	0.93
55_L	111_K	0.727	0.93
207_L	378_P	0.727	0.93
151_Q	155_E	0.726	0.93
138_Y	216_Q	0.726	0.93
338_K	341_A	0.725	0.93
296_H	299_E	0.725	0.93
19_L	101_L	0.724	0.92
255_R	258_E	0.723	0.92
227_C	241_P	0.721	0.92
85_I	100_V	0.721	0.92
193_H	196_Q	0.719	0.92
152_D	156_P	0.718	0.92
53_F	111_K	0.718	0.92
58_R	122_E	0.717	0.92
378_P	395_Q	0.714	0.92
132_S	279_V	0.713	0.92
186_I	192_L	0.712	0.92
220_L	325_Y	0.711	0.92
50_M	107_L	0.710	0.92
71_G	76_D	0.710	0.92
155_E	354_E	0.710	0.92
209_I	338_K	0.710	0.92
203_S	206_D	0.709	0.92
61_D	150_E	0.707	0.92
250_H	253_L	0.706	0.92
151_Q	154_K	0.704	0.91
128_E	136_M	0.702	0.91
343_E	346_L	0.700	0.91
155_E	163_S	0.699	0.91
46_V	100_V	0.699	0.91
66_F	144_M	0.698	0.91
226_E	381_G	0.697	0.91
40_M	59_F	0.697	0.91
175_K	178_F	0.697	0.91
185_D	190_V	0.696	0.91
25_S	28_G	0.696	0.91
346_L	349_G	0.693	0.91
202_M	236_K	0.691	0.91
221_V	309_I	0.689	0.91
81_T	121_L	0.689	0.91
366_I	369_R	0.688	0.90
391_T	395_Q	0.687	0.90
217_R	302_H	0.683	0.90
392_S	396_L	0.681	0.90
404_T	408_Y	0.678	0.90
196_Q	200_L	0.678	0.90
126_L	366_I	0.677	0.90
191_E	208_G	0.676	0.90
243_A	316_K	0.675	0.90
349_G	352_C	0.675	0.90
114_Y	117_P	0.675	0.90
148_F	153_A	0.674	0.90
67_G	71_G	0.672	0.89
51_S	56_E	0.672	0.89
265_L	290_I	0.670	0.89
110_L	116_A	0.669	0.89
232_T	264_R	0.668	0.89
169_H	174_G	0.667	0.89
223_L	244_A	0.667	0.89
58_R	68_R	0.666	0.89
246_S	250_H	0.663	0.89
98_Y	377_V	0.662	0.89
15_Y	18_W	0.662	0.89
128_E	139_W	0.661	0.89
269_K	275_N	0.660	0.89
67_G	123_A	0.657	0.88
82_G	362_D	0.654	0.88
28_G	32_R	0.653	0.88
214_A	293_Q	0.652	0.88
105_L	109_Q	0.652	0.88
151_Q	156_P	0.651	0.88
232_T	359_A	0.650	0.88
44_L	59_F	0.650	0.88
339_A	354_E	0.649	0.88
259_L	300_Q	0.649	0.88
254_L	308_L	0.649	0.88
26_A	134_F	0.649	0.88
198_K	202_M	0.646	0.87
55_L	67_G	0.644	0.87
33_L	132_S	0.643	0.87
196_Q	210_V	0.642	0.87
190_V	403_L	0.642	0.87
377_V	396_L	0.641	0.87
128_E	230_A	0.640	0.87
375_L	399_G	0.638	0.87
184_T	194_I	0.637	0.87
223_L	309_I	0.634	0.86
113_T	404_T	0.633	0.86
339_A	342_F	0.629	0.86
19_L	85_I	0.628	0.86
59_F	65_V	0.628	0.86
162_V	170_E	0.627	0.86
242_L	245_S	0.627	0.86
182_Y	186_I	0.627	0.86
163_S	167_A	0.627	0.86
399_G	403_L	0.625	0.86
63_G	67_G	0.624	0.86
56_E	68_R	0.621	0.85
234_S	358_G	0.619	0.85
201_E	205_R	0.617	0.85
57_T	67_G	0.616	0.85
69_L	115_G	0.616	0.85
109_Q	112_E	0.614	0.85
401_R	404_T	0.614	0.85
30_V	33_L	0.613	0.85
105_L	108_K	0.613	0.85
231_G	268_G	0.612	0.85
255_R	301_F	0.612	0.85
103_A	123_A	0.610	0.84
199_T	202_M	0.609	0.84
393_A	397_E	0.607	0.84
226_E	280_I	0.606	0.84
239_K	244_A	0.605	0.84
247_R	251_E	0.603	0.84
142_G	365_M	0.601	0.83
246_S	249_I	0.601	0.83
248_I	320_A	0.600	0.83
252_L	267_C	0.599	0.83
395_Q	398_I	0.598	0.83
260_P	294_H	0.598	0.83
46_V	104_M	0.597	0.83
184_T	188_A	0.597	0.83
306_V	322_I	0.596	0.83
51_S	57_T	0.596	0.83
11_S	112_E	0.595	0.83
210_V	215_G	0.594	0.83
12_I	16_I	0.594	0.83
144_M	366_I	0.594	0.83
335_E	368_R	0.593	0.83
213_I	216_Q	0.592	0.83
342_F	352_C	0.591	0.82
67_G	125_S	0.591	0.82
344_T	406_L	0.590	0.82
31_T	90_N	0.590	0.82
312_I	316_K	0.587	0.82
215_G	218_R	0.585	0.82
104_M	107_L	0.585	0.82
228_N	238_R	0.585	0.82
294_H	297_V	0.583	0.82
360_G	364_Q	0.583	0.82
190_V	337_L	0.582	0.81
98_Y	102_A	0.581	0.81
242_L	281_P	0.581	0.81
241_P	282_G	0.580	0.81
11_S	14_D	0.579	0.81
20_A	24_A	0.579	0.81
29_G	33_L	0.576	0.81
16_I	101_L	0.576	0.81
242_L	249_I	0.575	0.81
171_S	175_K	0.574	0.81
219_Y	324_E	0.573	0.80
190_V	407_L	0.572	0.80
252_L	288_I	0.572	0.80
375_L	403_L	0.571	0.80
390_Y	396_L	0.571	0.80
339_A	346_L	0.570	0.80
117_P	121_L	0.570	0.80
49_E	104_M	0.569	0.80
27_D	33_L	0.569	0.80
30_V	97_A	0.568	0.80
22_Y	38_E	0.567	0.80
27_D	30_V	0.567	0.80
300_Q	303_Q	0.566	0.80
44_L	51_S	0.566	0.80
62_V	150_E	0.566	0.80
97_A	125_S	0.565	0.80
350_F	402_A	0.565	0.80
52_S	108_K	0.564	0.79
185_D	192_L	0.563	0.79
217_R	298_L	0.561	0.79
293_Q	356_V	0.561	0.79
62_V	140_G	0.559	0.79
228_N	383_V	0.558	0.79
65_V	68_R	0.558	0.79
131_G	230_A	0.557	0.79
204_G	207_L	0.556	0.78
340_A	406_L	0.556	0.78
117_P	120_T	0.554	0.78
242_L	246_S	0.554	0.78
239_K	317_G	0.554	0.78
139_W	156_P	0.553	0.78
156_P	357_S	0.553	0.78
128_E	135_P	0.552	0.78
15_Y	45_A	0.550	0.78
162_V	166_T	0.550	0.78
72_T	75_P	0.550	0.78
336_R	340_A	0.548	0.77
87_T	93_K	0.548	0.77
206_D	378_P	0.548	0.77
304_D	307_A	0.547	0.77
65_V	70_S	0.546	0.77
94_Y	396_L	0.545	0.77
364_Q	367_G	0.545	0.77
87_T	396_L	0.544	0.77
113_T	408_Y	0.544	0.77
235_M	264_R	0.543	0.77
64_N	71_G	0.542	0.77
243_A	250_H	0.542	0.77
93_K	97_A	0.542	0.77
113_T	116_A	0.541	0.77
197_G	201_E	0.541	0.77
111_K	114_Y	0.540	0.76
64_N	124_V	0.540	0.76
381_G	384_S	0.538	0.76
197_G	200_L	0.538	0.76
154_K	174_G	0.537	0.76
195_E	208_G	0.537	0.76
20_A	23_G	0.537	0.76
72_T	120_T	0.534	0.76
139_W	153_A	0.533	0.76
164_L	168_M	0.530	0.75
337_L	406_L	0.529	0.75
247_R	312_I	0.528	0.75
79_I	187_S	0.528	0.75
204_G	208_G	0.526	0.75
168_M	171_S	0.525	0.74
81_T	189_F	0.525	0.74
88_V	276_V	0.522	0.74
277_A	325_Y	0.522	0.74
27_D	31_T	0.521	0.74
13_T	397_E	0.520	0.74
228_N	386_S	0.518	0.73
78_V	122_E	0.518	0.73
195_E	200_L	0.518	0.73
334_D	339_A	0.516	0.73
167_A	171_S	0.516	0.73
12_I	396_L	0.516	0.73
221_V	320_A	0.516	0.73
66_F	122_E	0.514	0.73
131_G	138_Y	0.512	0.73
276_V	279_V	0.512	0.73
159_E	271_T	0.512	0.73
73_Q	116_A	0.510	0.72
348_N	398_I	0.510	0.72
78_V	144_M	0.509	0.72
143_N	150_E	0.509	0.72
188_A	193_H	0.508	0.72
207_L	210_V	0.507	0.72
157_R	166_T	0.506	0.72
141_S	191_E	0.506	0.72
134_F	158_D	0.506	0.72
39_W	125_S	0.504	0.71
213_I	364_Q	0.504	0.71
103_A	106_A	0.504	0.71
19_L	22_Y	0.503	0.71
268_G	287_S	0.501	0.71
378_P	382_G	0.501	0.71
20_A	30_V	0.500	0.71
250_H	316_K	0.500	0.71

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3n5fA	2	0.9782	100	0.359	Contact Map
4pxdA	2	0.9927	100	0.362	Contact Map
4wjbA	2	0.9854	100	0.366	Contact Map
2v8hA	2	0.983	100	0.378	Contact Map
4pxeA	2	1	100	0.378	Contact Map
3khxA	1	0.8738	100	0.455	Contact Map
1lfwA	1	0.9539	100	0.463	Contact Map
3ifeA	2	0.8544	100	0.476	Contact Map
3pfoA	2	0.8398	100	0.48	Contact Map
3rzaA	2	0.8228	100	0.483	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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