YUBD - BACSU - GREMLIN Contacts

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YUBD - Uncharacterized MFS-type transporter YubD

UniProt:	O32084	Sequences: MKTKHYWVISLLAVLAVGPGLMSNTALSSVQGLVQKTVGTSVFTSVNPILIGNMAFALLVPAGPLLRKKFGARPVYLASLPVFILGSLLIACSGDIALMAAGRFLQGAATGVMLMIMIPMLVLSFPIERRNYALLVLIGGFYGSVIIGTILGTIATSCGHWRWLFFIFGTLSLIGVAVSYFFLHDEHHGAADQEQPLDRAGILLSVFLAAASAVSFIFLQKWGLSSGYVWIGFGVTLCLLIGLLIVEYKVKNPFISIKLMLLPKPVLGLLIIAAGTITVAVSLSAFQGLLRQMYDISQEHLILLSLTLLIGVAIAAILSALLYDKVGPGMLGIIGGLILVFVNFQWLHIQDRSSLYMFAALFIMLAAGTGLTVAAGLMGAAMGGPLPDLVKRMTAVQFLRLFVYMGVPILIGFFTKKDAARQSGSVQDSMMTAYHDLFFISFILSVLLVCLSFCMNATGMGHKLAHKPHDKAKTAPEKPAVSAQGLSKATVKSYKVINDTEYRNALRNLQK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	511 (444)
Sequences:	32378 (23377)
Seq/√Len:	1109.4

ECOLI - EMRB MDTD EMRY HSRA PROP NANT YEBQ YAJR XYLE GALP ARAE UIDB UHPT EXUT YDFJ RHMT YAAU YIHN YDJK YGCS MELB YDIN YDJE MDTM UHPC ENTS YQCE YICJ YDHC GLPT YIHO YJJL YAGG GUDP EMRD YDIM MHPT GARP MDFA TSGA ARAJ MDTG DGOT SHIA BCR MDTL MDTH YIHP YJHB KGTP YEGT YDHP NEPI YHJE YBJJ SOTB YHJX AMPG YDEE YNFM XAPB NUPG NARU SETA FSR YGAY NARK SETC FUCP CYNX YHHS SETB YCAD YEAN LACY LPLT
BACSU - YUBD YHCA BMR3 YUSP YFIU LMRB YCNB YVKA YWOD MMR CSBC YWTG YFIG YNCC TCRB IOLT IOLF YITG EXUT YFIS GUDP YQGE YKUC YFHI CSBX YBFB YVMA ARAE YOAB YNAJ YWBF YVQJ YYAJ YTBD YXAM YYBO YCXA NAIP GLPT YWFA YYBF NASA YQJV BMR2 YJBB YFNC YHJO YYCB NARK YUXJ GUTA YDGK BMR1 YWOG YFKL YBCL YFMI YDEG YDDS GLCP YFKF YCEJ YTTB BBEX YXLH PBUE YFMO YJMB YDER
HALSA - O54630 Q9HSM8 Q9HPD6 Q9HN67 Q9HS33 Q9HMR5 Q9HSK3 Q9HRX5
SULSO - Q97VC8 Q97YH0 Q97U91 Q97WR9 Q97X47 Q97Y15 Q97VB9 Q97YY8 Q97YL8 Q97VV2 Q97U43 Q7LX71 Q97U99 Q97VU3 Q97WR1 Q97VB7 Q7LX65 Q97UR4 Q97U80 Q97V89 Q97VT2 Q97WS7 Q97UY7 Q97U98 Q97UD8 Q97Y43 Q97Y11 Q97X92 Q97WT1 Q97U76 Q980K3 Q97ZC9 Q97XW7 Q97X63 Q97Z36 Q97VQ5 Q97YG2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
94_G	98_L	5.413	1.00
84_I	172_S	4.566	1.00
82_V	109_A	3.818	1.00
91_A	166_F	3.668	1.00
89_L	102_G	3.225	1.00
208_L	240_L	3.149	1.00
204_L	246_V	3.022	1.00
97_A	101_A	2.939	1.00
384_G	392_R	2.915	1.00
258_K	388_D	2.710	1.00
51_I	104_F	2.675	1.00
72_A	123_L	2.668	1.00
95_D	98_L	2.654	1.00
345_Q	361_L	2.650	1.00
406_G	409_I	2.531	1.00
315_A	367_A	2.505	1.00
207_F	239_L	2.495	1.00
311_G	363_I	2.462	1.00
215_S	233_F	2.444	1.00
200_A	246_V	2.413	1.00
212_S	236_T	2.363	1.00
439_F	443_I	2.292	1.00
77_L	180_Y	2.292	1.00
219_L	224_L	2.226	1.00
55_A	104_F	2.186	1.00
40_T	96_I	2.182	1.00
297_S	300_H	2.155	1.00
159_G	163_W	2.155	1.00
129_R	132_Y	2.132	1.00
59_L	108_A	2.131	1.00
385_P	388_D	2.124	1.00
77_L	176_V	2.103	1.00
86_G	109_A	2.095	1.00
241_I	245_I	2.078	1.00
177_A	181_F	2.059	1.00
90_I	102_G	2.049	1.00
340_V	446_V	2.037	1.00
179_S	183_L	2.026	1.00
256_S	388_D	2.020	1.00
198_D	201_G	1.994	1.00
273_A	403_V	1.986	1.00
98_L	102_G	1.945	1.00
342_V	365_L	1.941	1.00
347_L	439_F	1.937	1.00
155_A	163_W	1.926	1.00
230_W	234_G	1.919	1.00
86_G	105_L	1.915	1.00
41_S	44_T	1.901	1.00
344_F	442_F	1.897	1.00
30_V	156_T	1.877	1.00
16_A	76_Y	1.831	1.00
336_G	448_L	1.802	1.00
79_S	112_V	1.799	1.00
160_H	163_W	1.777	1.00
208_L	236_T	1.759	1.00
250_V	253_P	1.743	1.00
291_R	301_L	1.742	1.00
405_M	409_I	1.738	1.00
406_G	411_I	1.727	1.00
63_G	112_V	1.723	1.00
86_G	102_G	1.721	1.00
289_L	294_Y	1.679	1.00
431_M	435_H	1.676	1.00
14_V	140_G	1.663	1.00
337_L	449_V	1.658	1.00
125_F	133_A	1.654	1.00
211_A	232_G	1.648	1.00
68_K	390_V	1.647	1.00
196_P	252_N	1.628	1.00
96_I	100_A	1.616	1.00
44_T	96_I	1.604	1.00
405_M	408_P	1.598	1.00
157_S	299_E	1.586	1.00
18_G	144_S	1.579	1.00
278_T	445_S	1.574	1.00
131_N	324_D	1.572	1.00
354_S	357_M	1.567	1.00
211_A	239_L	1.565	1.00
340_V	449_V	1.563	1.00
243_L	247_E	1.544	1.00
321_L	325_K	1.536	1.00
87_S	168_F	1.528	1.00
77_L	179_S	1.528	1.00
208_L	239_L	1.514	1.00
51_I	100_A	1.514	1.00
9_I	124_S	1.498	1.00
231_I	235_V	1.497	1.00
406_G	413_F	1.488	1.00
218_F	222_W	1.475	1.00
246_V	250_V	1.474	1.00
88_L	92_C	1.471	1.00
58_L	206_V	1.469	1.00
428_D	432_T	1.461	1.00
407_V	411_I	1.458	1.00
218_F	221_K	1.455	1.00
67_R	72_A	1.445	1.00
211_A	235_V	1.444	1.00
93_S	98_L	1.443	1.00
73_R	77_L	1.442	1.00
406_G	415_T	1.436	1.00
227_G	231_I	1.436	1.00
65_L	69_K	1.432	1.00
245_I	249_K	1.432	1.00
338_I	368_G	1.426	1.00
296_I	304_L	1.425	1.00
277_I	407_V	1.425	1.00
260_M	266_V	1.422	1.00
127_I	130_R	1.422	1.00
340_V	442_F	1.416	1.00
340_V	344_F	1.413	1.00
248_Y	258_K	1.413	1.00
199_R	203_L	1.408	1.00
40_T	44_T	1.408	1.00
74_P	185_D	1.406	1.00
432_T	436_D	1.402	1.00
88_L	169_G	1.399	1.00
90_I	99_M	1.395	1.00
33_L	36_K	1.393	1.00
66_L	75_V	1.390	1.00
330_M	333_I	1.390	1.00
126_P	129_R	1.386	1.00
268_G	380_A	1.383	1.00
93_S	102_G	1.378	1.00
266_V	270_L	1.373	1.00
347_L	442_F	1.366	1.00
122_V	130_R	1.364	1.00
244_L	248_Y	1.361	1.00
342_V	368_G	1.361	1.00
215_S	236_T	1.360	1.00
52_G	110_T	1.360	1.00
300_H	303_L	1.351	1.00
436_D	440_I	1.340	1.00
23_S	26_A	1.337	1.00
339_L	445_S	1.331	1.00
81_P	176_V	1.328	1.00
214_V	218_F	1.320	1.00
67_R	116_I	1.316	1.00
404_Y	407_V	1.315	1.00
406_G	414_F	1.295	1.00
78_A	82_V	1.294	1.00
204_L	239_L	1.292	1.00
355_L	359_A	1.287	1.00
154_I	158_C	1.286	1.00
48_P	99_M	1.282	1.00
335_G	371_L	1.278	1.00
30_V	164_L	1.274	1.00
244_L	257_I	1.269	1.00
35_Q	45_S	1.247	1.00
342_V	361_L	1.236	1.00
12_L	182_F	1.233	1.00
245_I	248_Y	1.232	1.00
356_Y	360_A	1.231	1.00
337_L	341_F	1.228	1.00
89_L	98_L	1.225	1.00
409_I	413_F	1.218	1.00
84_I	176_V	1.210	1.00
97_A	100_A	1.208	1.00
296_I	300_H	1.208	1.00
333_I	453_F	1.207	1.00
26_A	164_L	1.204	1.00
59_L	111_G	1.204	1.00
256_S	391_K	1.193	1.00
201_G	246_V	1.190	1.00
235_V	239_L	1.185	1.00
308_L	366_A	1.185	1.00
329_G	333_I	1.185	1.00
12_L	178_V	1.184	1.00
327_G	330_M	1.182	1.00
14_V	136_V	1.181	1.00
290_L	304_L	1.179	1.00
21_L	141_F	1.177	1.00
178_V	182_F	1.175	1.00
236_T	240_L	1.171	1.00
267_L	454_C	1.162	1.00
215_S	229_V	1.162	1.00
430_M	434_Y	1.157	1.00
173_L	177_A	1.157	1.00
409_I	415_T	1.152	1.00
222_W	228_Y	1.145	1.00
85_L	89_L	1.144	1.00
311_G	315_A	1.144	1.00
356_Y	359_A	1.140	1.00
321_L	324_D	1.140	1.00
269_L	399_L	1.134	1.00
55_A	107_G	1.131	1.00
407_V	415_T	1.131	1.00
10_S	125_F	1.125	1.00
320_A	324_D	1.123	1.00
12_L	175_G	1.122	1.00
442_F	446_V	1.122	1.00
263_P	267_L	1.119	1.00
315_A	370_G	1.118	1.00
76_Y	179_S	1.115	1.00
439_F	442_F	1.115	1.00
77_L	81_P	1.112	1.00
7_W	11_L	1.105	1.00
157_S	297_S	1.104	1.00
350_Q	353_S	1.097	1.00
335_G	372_T	1.097	1.00
300_H	304_L	1.096	1.00
23_S	168_F	1.094	1.00
207_F	211_A	1.085	1.00
450_C	454_C	1.084	1.00
92_C	166_F	1.082	1.00
80_L	175_G	1.078	1.00
19_P	172_S	1.073	1.00
319_S	371_L	1.069	1.00
435_H	439_F	1.063	1.00
15_L	175_G	1.063	1.00
64_P	68_K	1.062	1.00
304_L	355_L	1.059	1.00
443_I	447_L	1.056	1.00
204_L	242_G	1.053	1.00
181_F	184_H	1.051	1.00
330_M	334_I	1.048	1.00
262_L	266_V	1.046	1.00
72_A	185_D	1.044	1.00
322_L	326_V	1.038	1.00
62_A	202_I	1.038	1.00
84_I	88_L	1.036	1.00
224_L	229_V	1.028	1.00
240_L	244_L	1.023	1.00
446_V	450_C	1.023	1.00
153_T	298_Q	1.020	1.00
90_I	165_F	1.018	1.00
336_G	449_V	1.017	1.00
281_V	411_I	1.015	1.00
121_L	137_L	1.015	1.00
128_E	132_Y	1.014	1.00
342_V	364_M	1.010	1.00
344_F	347_L	1.007	1.00
68_K	72_A	1.005	1.00
274_A	448_L	1.004	1.00
333_I	449_V	1.004	1.00
233_F	237_L	1.003	1.00
222_W	229_V	1.002	1.00
71_G	74_P	1.001	1.00
334_I	371_L	1.000	1.00
89_L	92_C	1.000	1.00
265_P	269_L	0.999	1.00
24_N	53_N	0.997	1.00
237_L	241_I	0.996	1.00
242_G	245_I	0.994	1.00
82_V	86_G	0.986	1.00
122_V	389_L	0.978	1.00
222_W	226_S	0.977	1.00
348_H	361_L	0.977	1.00
151_L	154_I	0.974	1.00
225_S	230_W	0.972	1.00
84_I	169_G	0.972	1.00
344_F	348_H	0.969	1.00
347_L	435_H	0.969	1.00
73_R	180_Y	0.966	1.00
264_K	456_N	0.966	1.00
94_G	97_A	0.964	1.00
50_L	217_I	0.958	1.00
47_N	51_I	0.957	1.00
275_G	372_T	0.957	1.00
163_W	170_T	0.955	1.00
333_I	452_S	0.952	1.00
215_S	232_G	0.951	1.00
258_K	261_L	0.951	1.00
271_I	452_S	0.948	1.00
380_A	396_V	0.944	1.00
51_I	55_A	0.943	1.00
75_V	78_A	0.943	1.00
255_I	395_A	0.940	1.00
407_V	412_G	0.932	1.00
408_P	411_I	0.931	1.00
269_L	395_A	0.931	1.00
169_G	173_L	0.927	1.00
410_L	414_F	0.926	1.00
66_L	70_F	0.926	1.00
432_T	435_H	0.924	1.00
48_P	96_I	0.924	1.00
436_D	439_F	0.923	1.00
8_V	182_F	0.918	1.00
155_A	159_G	0.916	1.00
285_A	437_L	0.913	1.00
262_L	388_D	0.913	1.00
263_P	266_V	0.913	1.00
262_L	385_P	0.912	1.00
315_A	319_S	0.911	1.00
357_M	360_A	0.906	1.00
345_Q	348_H	0.906	1.00
26_A	152_G	0.905	1.00
101_A	104_F	0.901	1.00
351_D	431_M	0.897	1.00
178_V	181_F	0.896	1.00
407_V	413_F	0.893	1.00
413_F	417_K	0.890	1.00
55_A	59_L	0.888	1.00
357_M	361_L	0.884	1.00
203_L	207_F	0.880	1.00
405_M	415_T	0.879	1.00
201_G	250_V	0.879	1.00
360_A	363_I	0.879	1.00
310_I	314_I	0.878	1.00
33_L	37_T	0.878	1.00
75_V	112_V	0.878	1.00
206_V	210_A	0.875	1.00
155_A	167_I	0.873	1.00
216_F	219_L	0.872	1.00
162_R	166_F	0.871	1.00
238_C	242_G	0.870	1.00
74_P	78_A	0.869	1.00
273_A	399_L	0.869	1.00
315_A	318_L	0.864	1.00
92_C	102_G	0.864	1.00
349_I	353_S	0.862	1.00
318_L	321_L	0.857	1.00
131_N	135_L	0.856	1.00
340_V	445_S	0.852	1.00
27_L	48_P	0.851	1.00
339_L	368_G	0.851	1.00
13_A	117_M	0.850	1.00
61_P	205_S	0.848	1.00
412_G	416_K	0.845	1.00
265_P	392_R	0.845	1.00
78_A	81_P	0.844	1.00
308_L	365_L	0.843	1.00
98_L	101_A	0.842	1.00
28_S	49_I	0.842	1.00
248_Y	257_I	0.841	1.00
131_N	320_A	0.841	1.00
228_Y	232_G	0.840	1.00
280_A	404_Y	0.835	1.00
197_L	202_I	0.835	1.00
267_L	451_L	0.834	1.00
317_I	321_L	0.833	1.00
334_I	338_I	0.829	1.00
315_A	371_L	0.829	1.00
272_I	396_V	0.828	1.00
94_G	102_G	0.824	1.00
404_Y	408_P	0.824	1.00
117_M	137_L	0.821	1.00
20_G	113_M	0.821	1.00
319_S	370_G	0.820	1.00
73_R	185_D	0.818	1.00
264_K	383_G	0.817	1.00
291_R	298_Q	0.816	1.00
262_L	383_G	0.816	1.00
407_V	414_F	0.816	1.00
410_L	413_F	0.812	1.00
353_S	357_M	0.812	1.00
228_Y	231_I	0.811	1.00
290_L	358_F	0.807	1.00
290_L	294_Y	0.807	1.00
176_V	180_Y	0.801	1.00
411_I	415_T	0.800	1.00
242_G	246_V	0.799	1.00
326_V	331_L	0.799	1.00
336_G	372_T	0.797	1.00
335_G	368_G	0.796	1.00
408_P	412_G	0.794	1.00
414_F	418_D	0.794	1.00
433_A	437_L	0.792	1.00
343_N	441_S	0.791	1.00
270_L	451_L	0.788	1.00
86_G	89_L	0.787	1.00
246_V	249_K	0.786	1.00
185_D	188_H	0.785	1.00
123_L	389_L	0.784	1.00
207_F	235_V	0.782	1.00
343_N	365_L	0.781	1.00
21_L	144_S	0.781	1.00
158_C	299_E	0.779	1.00
440_I	443_I	0.778	1.00
201_G	247_E	0.778	1.00
359_A	363_I	0.777	1.00
94_G	162_R	0.776	1.00
326_V	330_M	0.775	1.00
208_L	244_L	0.771	1.00
410_L	415_T	0.771	1.00
333_I	337_L	0.770	1.00
31_Q	45_S	0.769	1.00
68_K	391_K	0.768	1.00
277_I	444_L	0.768	1.00
290_L	296_I	0.766	1.00
40_T	45_S	0.765	1.00
196_P	251_K	0.764	1.00
414_F	417_K	0.764	1.00
226_S	229_V	0.762	1.00
9_I	12_L	0.762	1.00
49_I	284_S	0.761	1.00
101_A	105_L	0.761	1.00
209_A	398_F	0.758	1.00
211_A	236_T	0.758	1.00
72_A	119_P	0.757	1.00
80_L	176_V	0.753	1.00
202_I	254_F	0.752	1.00
34_V	99_M	0.751	1.00
70_F	75_V	0.750	1.00
241_I	244_L	0.749	1.00
209_A	402_F	0.746	1.00
44_T	97_A	0.745	1.00
58_L	210_A	0.743	1.00
34_V	45_S	0.742	1.00
214_V	232_G	0.740	1.00
120_M	124_S	0.735	1.00
195_Q	252_N	0.731	1.00
329_G	457_A	0.729	1.00
118_I	137_L	0.729	1.00
202_I	206_V	0.725	1.00
122_V	134_L	0.724	1.00
142_Y	312_V	0.723	1.00
233_F	236_T	0.721	1.00
163_W	166_F	0.721	1.00
22_M	26_A	0.720	1.00
271_I	451_L	0.718	1.00
381_A	393_M	0.718	1.00
287_Q	301_L	0.715	1.00
404_Y	409_I	0.714	1.00
336_G	445_S	0.713	1.00
303_L	307_T	0.713	1.00
135_L	139_G	0.712	1.00
377_L	396_V	0.711	1.00
207_F	210_A	0.711	1.00
103_R	106_Q	0.711	1.00
267_L	455_M	0.707	1.00
79_S	109_A	0.707	1.00
360_A	364_M	0.707	1.00
311_G	367_A	0.704	1.00
412_G	415_T	0.703	1.00
261_L	266_V	0.700	1.00
17_V	141_F	0.699	1.00
408_P	415_T	0.697	1.00
34_V	38_V	0.697	1.00
405_M	411_I	0.694	1.00
154_I	299_E	0.692	1.00
157_S	298_Q	0.692	1.00
231_I	234_G	0.692	1.00
220_Q	223_G	0.691	1.00
205_S	254_F	0.691	1.00
200_A	204_L	0.688	1.00
322_L	331_L	0.688	1.00
440_I	444_L	0.686	1.00
443_I	450_C	0.685	1.00
139_G	143_G	0.682	1.00
351_D	428_D	0.682	1.00
12_L	179_S	0.681	1.00
74_P	77_L	0.680	1.00
81_P	85_L	0.678	1.00
409_I	414_F	0.676	1.00
225_S	228_Y	0.676	1.00
170_T	173_L	0.676	1.00
307_T	311_G	0.675	1.00
30_V	34_V	0.675	1.00
229_V	232_G	0.674	1.00
329_G	456_N	0.674	1.00
89_L	105_L	0.672	1.00
119_P	390_V	0.672	1.00
336_G	340_V	0.670	1.00
341_F	344_F	0.668	1.00
338_I	364_M	0.667	1.00
16_A	80_L	0.667	1.00
146_I	309_L	0.666	1.00
449_V	453_F	0.666	1.00
144_S	149_T	0.664	1.00
72_A	186_E	0.664	1.00
67_R	119_P	0.663	1.00
234_G	238_C	0.661	1.00
31_Q	49_I	0.660	1.00
177_A	180_Y	0.659	1.00
447_L	451_L	0.658	1.00
84_I	173_L	0.655	1.00
56_F	401_L	0.653	1.00
397_Q	400_R	0.653	1.00
200_A	203_L	0.652	1.00
323_Y	378_M	0.651	1.00
331_L	334_I	0.651	1.00
286_F	438_F	0.651	1.00
180_Y	184_H	0.651	1.00
52_G	103_R	0.650	1.00
265_P	380_A	0.648	1.00
414_F	440_I	0.647	1.00
341_F	345_Q	0.646	1.00
64_P	394_T	0.644	1.00
288_G	292_Q	0.644	1.00
378_M	382_M	0.643	1.00
404_Y	415_T	0.641	1.00
188_H	191_A	0.638	1.00
318_L	322_L	0.638	1.00
327_G	331_L	0.638	1.00
335_G	342_V	0.637	1.00
16_A	113_M	0.637	1.00
56_F	110_T	0.635	1.00
269_L	396_V	0.635	1.00
247_E	250_V	0.634	1.00
226_S	230_W	0.633	1.00
170_T	174_I	0.632	1.00
235_V	242_G	0.631	1.00
7_W	125_F	0.628	1.00
55_A	108_A	0.627	1.00
281_V	441_S	0.626	1.00
339_L	342_V	0.625	1.00
38_V	96_I	0.625	1.00
67_R	390_V	0.624	1.00
124_S	184_H	0.621	1.00
323_Y	375_A	0.621	1.00
87_S	106_Q	0.621	1.00
349_I	361_L	0.619	1.00
314_I	317_I	0.619	1.00
334_I	337_L	0.618	1.00
18_G	140_G	0.618	1.00
154_I	159_G	0.617	1.00
153_T	302_I	0.617	1.00
166_F	170_T	0.617	1.00
119_P	393_M	0.616	1.00
306_L	309_L	0.614	1.00
450_C	453_F	0.614	1.00
406_G	410_L	0.612	1.00
408_P	413_F	0.612	1.00
174_I	178_V	0.611	1.00
58_L	202_I	0.611	1.00
304_L	307_T	0.610	1.00
371_L	375_A	0.608	1.00
121_L	133_A	0.607	1.00
187_H	190_A	0.607	1.00
132_Y	321_L	0.606	1.00
323_Y	327_G	0.606	1.00
37_T	162_R	0.606	1.00
333_I	340_V	0.605	1.00
63_G	79_S	0.605	1.00
343_N	347_L	0.605	1.00
57_A	401_L	0.604	1.00
45_S	48_P	0.604	1.00
286_F	362_F	0.603	1.00
407_V	410_L	0.603	1.00
248_Y	261_L	0.602	1.00
411_I	414_F	0.602	1.00
346_W	349_I	0.601	1.00
426_V	430_M	0.600	1.00
80_L	172_S	0.596	1.00
282_S	365_L	0.595	1.00
333_I	336_G	0.594	1.00
125_F	129_R	0.594	1.00
237_L	240_L	0.593	1.00
197_L	201_G	0.593	1.00
55_A	109_A	0.592	1.00
91_A	162_R	0.591	1.00
208_L	211_A	0.591	1.00
23_S	167_I	0.590	1.00
196_P	200_A	0.589	1.00
63_G	115_M	0.587	1.00
453_F	456_N	0.586	1.00
141_F	145_V	0.585	1.00
198_D	246_V	0.584	1.00
123_L	186_E	0.581	1.00
441_S	445_S	0.580	1.00
148_G	152_G	0.579	1.00
102_G	105_L	0.579	1.00
57_A	402_F	0.579	1.00
200_A	250_V	0.579	1.00
34_V	156_T	0.579	1.00
271_I	336_G	0.579	1.00
337_L	340_V	0.577	1.00
380_A	383_G	0.576	1.00
239_L	242_G	0.576	1.00
152_G	156_T	0.576	1.00
328_P	457_A	0.575	1.00
433_A	436_D	0.574	1.00
218_F	229_V	0.571	1.00
279_V	369_T	0.571	1.00
448_L	452_S	0.571	1.00
134_L	138_I	0.568	1.00
366_A	370_G	0.566	1.00
90_I	93_S	0.565	1.00
25_T	145_V	0.564	1.00
456_N	459_G	0.562	1.00
271_I	376_G	0.560	1.00
243_L	255_I	0.559	1.00
205_S	209_A	0.559	1.00
156_T	160_H	0.559	1.00
88_L	166_F	0.559	1.00
303_L	306_L	0.558	1.00
278_T	441_S	0.558	1.00
273_A	406_G	0.558	1.00
13_A	124_S	0.556	1.00
64_P	116_I	0.556	1.00
144_S	148_G	0.556	1.00
227_G	230_W	0.554	1.00
277_I	406_G	0.554	1.00
147_I	150_I	0.554	1.00
213_A	405_M	0.551	1.00
19_P	168_F	0.551	1.00
267_L	456_N	0.551	1.00
296_I	355_L	0.551	1.00
394_T	398_F	0.549	1.00
68_K	71_G	0.549	1.00
196_P	199_R	0.549	1.00
297_S	301_L	0.547	1.00
264_K	268_G	0.546	1.00
274_A	444_L	0.546	1.00
266_V	269_L	0.546	1.00
132_Y	136_V	0.546	1.00
335_G	375_A	0.545	1.00
149_T	302_I	0.544	1.00
406_G	412_G	0.544	1.00
415_T	437_L	0.544	1.00
276_T	400_R	0.544	1.00
208_L	241_I	0.543	1.00
344_F	439_F	0.543	1.00
59_L	62_A	0.543	1.00
260_M	265_P	0.543	1.00
35_Q	41_S	0.542	1.00
215_S	219_L	0.541	1.00
264_K	379_G	0.541	1.00
223_G	226_S	0.541	1.00
405_M	414_F	0.539	1.00
7_W	132_Y	0.538	1.00
427_Q	430_M	0.538	1.00
83_F	109_A	0.538	1.00
128_E	131_N	0.537	1.00
405_M	413_F	0.537	1.00
82_V	108_A	0.536	1.00
90_I	106_Q	0.536	1.00
264_K	267_L	0.535	1.00
389_L	393_M	0.535	1.00
47_N	54_M	0.533	1.00
434_Y	438_F	0.532	1.00
226_S	231_I	0.532	1.00
19_P	23_S	0.531	1.00
168_F	172_S	0.531	1.00
53_N	404_Y	0.529	1.00
386_L	389_L	0.529	1.00
138_I	142_Y	0.527	1.00
205_S	243_L	0.526	1.00
348_H	357_M	0.525	1.00
185_D	189_G	0.525	1.00
64_P	390_V	0.525	1.00
343_N	445_S	0.523	1.00
134_L	378_M	0.522	1.00
218_F	228_Y	0.521	1.00
33_L	291_R	0.518	1.00
28_S	284_S	0.516	1.00
403_V	407_V	0.516	1.00
36_K	39_G	0.515	1.00
429_S	433_A	0.515	1.00
408_P	414_F	0.514	1.00
140_G	144_S	0.513	1.00
219_L	229_V	0.513	1.00
426_V	429_S	0.513	1.00
23_S	103_R	0.512	1.00
156_T	159_G	0.512	1.00
156_T	164_L	0.512	1.00
92_C	98_L	0.510	1.00
158_C	163_W	0.510	1.00
19_P	80_L	0.510	1.00
219_L	222_W	0.510	1.00
331_L	371_L	0.509	1.00
69_K	196_P	0.507	1.00
58_L	111_G	0.507	1.00
26_A	167_I	0.506	1.00
289_L	293_M	0.504	1.00
128_E	324_D	0.504	1.00
73_R	184_H	0.504	1.00
381_A	389_L	0.503	1.00
199_R	202_I	0.503	1.00
45_S	288_G	0.503	1.00
286_F	290_L	0.503	1.00
204_L	208_L	0.502	1.00
34_V	37_T	0.501	1.00
413_F	416_K	0.501	1.00
453_F	457_A	0.501	1.00
410_L	417_K	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3wdoA	1	0.8552	100	0.42	Contact Map
4pypA	1	0.816	100	0.422	Contact Map
1pw4A	1	0.8004	100	0.439	Contact Map
4j05A	3	0.7476	100	0.448	Contact Map
4zw9A	1	0.8532	100	0.461	Contact Map
4ldsA	2	0.8043	100	0.478	Contact Map
4gc0A	1	0.8513	100	0.478	Contact Map
2gfpA	2	0.7339	100	0.48	Contact Map
4tphA	2	0.8317	100	0.483	Contact Map
3o7qA	1	0.7495	100	0.492	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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