KTRB - BACSU - GREMLIN Contacts

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KTRB - Ktr system potassium uptake protein B

UniProt:	O32081	Sequences: MTLQKDKVIKWVRFTPPQVLAIGFFLTIIIGAVLLMLPISTTKPLSWIDALFTAASATTVTGLAVVDTGTQFTVFGQTVIMGLIQIGGLGFMTFAVLIVMILGKKIGLKERMLVQEALNQPTIGGVIGLVKVLFLFSISIELIAALILSIRLVPQYGWSSGLFASLFHAISAFNNAGFSLWPDNLMSYVGDPTVNLVITFLFITGGIGFTVLFDVMKNRRFKTFSLHTKLMLTGTLMLNAIAMLTVFILEYSNPGTLGHLHIVDKLWASYFQAVTPRTAGFNSLDFGSMREGTIVFTLLLMFIGAGSASTASGIKLTTFIVILTSVIAYLRGKKETVIFRRSIKYPIIIKALAVSVTSLFIVFLGIFALTITEQAPFLQIVFETFSAFGTVGLTMGLTPELTTAGKCIIIVIMFIGRIGPLTFVFSFAKTEQSNIRYPDGEVFTG	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	445 (403)
Sequences:	5191 (3939)
Seq/√Len:	196.2

ECOLI - TRKG TRKH
BACSU - KTRB KTRD
HALSA - Q9HQ81 Q9HMF7 Q9HPA9

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
365_G	412_I	4.405	1.00
305_A	311_A	4.302	1.00
49_D	406_K	3.519	1.00
145_A	166_L	3.418	1.00
199_T	270_Y	3.400	1.00
48_I	407_C	3.227	1.00
148_L	198_I	3.217	1.00
368_A	408_I	3.111	1.00
144_A	201_L	2.944	1.00
85_Q	141_E	2.919	1.00
151_R	191_D	2.753	1.00
183_D	187_S	2.593	1.00
285_D	288_S	2.573	1.00
306_G	316_L	2.524	1.00
181_W	187_S	2.498	1.00
372_T	405_G	2.492	1.00
376_P	379_Q	2.412	1.00
147_I	197_V	2.410	1.00
369_L	405_G	2.389	1.00
151_R	193_T	2.381	1.00
84_I	171_S	2.381	1.00
261_H	264_D	2.332	1.00
81_M	167_F	2.325	1.00
51_L	410_I	2.314	1.00
366_I	381_V	2.271	1.00
32_A	47_W	2.268	1.00
149_S	162_L	2.219	1.00
372_T	404_A	2.206	1.00
276_P	297_T	2.141	1.00
74_V	78_T	2.140	1.00
77_Q	163_F	2.135	1.00
48_I	410_I	2.108	1.00
151_R	197_V	2.097	1.00
55_A	410_I	2.042	1.00
168_H	179_S	2.020	1.00
145_A	162_L	2.017	1.00
195_N	268_A	2.011	1.00
227_H	231_M	1.998	1.00
171_S	281_F	1.990	1.00
195_N	267_W	1.981	1.00
75_F	79_V	1.949	1.00
199_T	274_V	1.937	1.00
386_S	398_T	1.887	1.00
206_G	277_R	1.877	1.00
48_I	403_T	1.866	1.00
365_G	408_I	1.856	1.00
151_R	194_V	1.855	1.00
322_I	355_S	1.831	1.00
185_L	198_I	1.814	1.00
193_T	197_V	1.809	1.00
247_F	251_Y	1.799	1.00
36_M	47_W	1.782	1.00
46_S	49_D	1.782	1.00
147_I	193_T	1.774	1.00
67_D	70_T	1.770	1.00
173_F	205_G	1.765	1.00
149_S	165_S	1.753	1.00
362_V	385_F	1.752	1.00
368_A	404_A	1.746	1.00
263_V	267_W	1.744	1.00
64_A	68_T	1.722	1.00
45_L	71_Q	1.710	1.00
45_L	66_V	1.699	1.00
298_L	385_F	1.699	1.00
192_P	267_W	1.685	1.00
196_L	200_F	1.685	1.00
203_I	274_V	1.683	1.00
195_N	283_S	1.642	1.00
68_T	71_Q	1.622	1.00
181_W	188_Y	1.617	1.00
321_V	343_I	1.616	1.00
245_T	296_F	1.602	1.00
362_V	388_F	1.591	1.00
386_S	391_V	1.580	1.00
196_L	267_W	1.556	1.00
366_I	384_T	1.545	1.00
327_I	331_R	1.544	1.00
225_S	231_M	1.535	1.00
145_A	169_A	1.534	1.00
229_K	233_T	1.524	1.00
314_I	319_F	1.522	1.00
372_T	402_T	1.513	1.00
278_T	391_V	1.511	1.00
379_Q	395_M	1.508	1.00
131_K	135_L	1.477	1.00
189_V	268_A	1.455	1.00
202_F	275_T	1.448	1.00
56_S	178_F	1.446	1.00
167_F	180_L	1.442	1.00
202_F	279_A	1.439	1.00
273_A	276_P	1.426	1.00
63_L	398_T	1.424	1.00
200_F	204_T	1.424	1.00
40_S	75_F	1.418	1.00
36_M	40_S	1.416	1.00
196_L	263_V	1.416	1.00
358_S	388_F	1.415	1.00
225_S	229_K	1.415	1.00
53_T	65_V	1.407	1.00
148_L	194_V	1.406	1.00
246_V	293_T	1.404	1.00
303_I	316_L	1.402	1.00
375_A	397_L	1.388	1.00
55_A	414_F	1.380	1.00
77_Q	81_M	1.378	1.00
84_I	176_A	1.378	1.00
172_A	198_I	1.375	1.00
147_I	151_R	1.368	1.00
234_G	320_I	1.365	1.00
21_A	414_F	1.364	1.00
232_L	236_L	1.342	1.00
286_F	297_T	1.338	1.00
47_W	51_L	1.336	1.00
51_L	407_C	1.333	1.00
407_C	411_V	1.328	1.00
164_A	181_W	1.325	1.00
407_C	410_I	1.319	1.00
45_L	72_F	1.317	1.00
48_I	406_K	1.317	1.00
69_G	182_P	1.315	1.00
160_S	194_V	1.313	1.00
239_N	274_V	1.308	1.00
196_L	270_Y	1.304	1.00
242_A	273_A	1.304	1.00
160_S	164_A	1.301	1.00
299_L	303_I	1.296	1.00
179_S	182_P	1.295	1.00
172_A	281_F	1.292	1.00
206_G	233_T	1.287	1.00
42_T	73_T	1.284	1.00
162_L	166_L	1.279	1.00
127_I	131_K	1.266	1.00
298_L	381_V	1.247	1.00
365_G	384_T	1.247	1.00
196_L	266_L	1.246	1.00
149_S	161_G	1.243	1.00
294_I	395_M	1.241	1.00
375_A	380_I	1.240	1.00
32_A	51_L	1.229	1.00
214_D	225_S	1.227	1.00
272_Q	283_S	1.226	1.00
168_H	180_L	1.225	1.00
246_V	297_T	1.211	1.00
74_V	163_F	1.211	1.00
72_F	80_I	1.211	1.00
54_A	83_L	1.197	1.00
235_T	239_N	1.195	1.00
57_A	178_F	1.192	1.00
32_A	55_A	1.191	1.00
321_V	348_I	1.183	1.00
251_Y	265_K	1.182	1.00
192_P	195_N	1.178	1.00
237_M	241_I	1.177	1.00
228_T	231_M	1.173	1.00
144_A	169_A	1.170	1.00
186_M	282_N	1.164	1.00
68_T	182_P	1.163	1.00
401_L	409_I	1.162	1.00
140_I	204_T	1.159	1.00
195_N	199_T	1.159	1.00
81_M	163_F	1.159	1.00
226_L	229_K	1.155	1.00
49_D	65_V	1.150	1.00
51_L	55_A	1.147	1.00
189_V	192_P	1.143	1.00
262_I	266_L	1.143	1.00
411_V	415_I	1.141	1.00
303_I	319_F	1.140	1.00
183_D	186_M	1.133	1.00
268_A	272_Q	1.130	1.00
384_T	412_I	1.129	1.00
290_R	293_T	1.128	1.00
335_E	342_S	1.121	1.00
264_D	268_A	1.119	1.00
35_L	54_A	1.119	1.00
39_I	83_L	1.116	1.00
366_I	380_I	1.114	1.00
369_L	409_I	1.113	1.00
286_F	289_M	1.111	1.00
39_I	75_F	1.109	1.00
32_A	36_M	1.109	1.00
189_V	195_N	1.105	1.00
325_S	352_L	1.101	1.00
355_S	359_L	1.096	1.00
140_I	212_L	1.092	1.00
245_T	248_I	1.092	1.00
362_V	366_I	1.085	1.00
46_S	403_T	1.085	1.00
186_M	285_D	1.079	1.00
298_L	382_F	1.072	1.00
81_M	166_L	1.071	1.00
302_F	362_V	1.060	1.00
144_A	198_I	1.060	1.00
241_I	245_T	1.058	1.00
268_A	284_L	1.057	1.00
260_L	268_A	1.057	1.00
78_T	82_G	1.054	1.00
172_A	201_L	1.052	1.00
22_I	26_L	1.048	1.00
307_S	317_T	1.047	1.00
27_T	58_T	1.039	1.00
135_L	139_S	1.029	1.00
66_V	72_F	1.029	1.00
345_Y	349_I	1.027	1.00
202_F	274_V	1.026	1.00
65_V	68_T	1.024	1.00
196_L	199_T	1.023	1.00
141_E	169_A	1.020	1.00
401_L	405_G	1.015	1.00
370_T	380_I	1.006	1.00
144_A	197_V	1.003	1.00
74_V	77_Q	1.003	1.00
81_M	170_I	1.000	1.00
203_I	234_G	1.000	1.00
42_T	77_Q	0.997	1.00
321_V	351_A	0.996	1.00
368_A	372_T	0.995	1.00
161_G	165_S	0.995	1.00
286_F	395_M	0.992	1.00
294_I	379_Q	0.989	1.00
402_T	405_G	0.986	1.00
253_N	258_G	0.985	1.00
146_L	150_I	0.982	0.99
369_L	384_T	0.980	0.99
240_A	300_L	0.975	0.99
192_P	263_V	0.970	0.99
192_P	196_L	0.967	0.99
168_H	181_W	0.964	0.99
203_I	239_N	0.964	0.99
361_I	415_I	0.962	0.99
53_T	68_T	0.962	0.99
148_L	197_V	0.950	0.99
387_A	409_I	0.950	0.99
228_T	232_L	0.948	0.99
296_F	367_F	0.945	0.99
243_M	266_L	0.941	0.99
248_I	252_S	0.939	0.99
247_F	265_K	0.938	0.99
404_A	408_I	0.937	0.99
236_L	240_A	0.933	0.99
292_G	367_F	0.930	0.99
383_E	394_T	0.929	0.99
148_L	172_A	0.928	0.99
240_A	243_M	0.927	0.99
31_G	83_L	0.926	0.99
217_K	220_R	0.923	0.99
78_T	163_F	0.916	0.99
226_L	231_M	0.912	0.99
144_A	148_L	0.910	0.99
67_D	182_P	0.910	0.99
323_L	327_I	0.910	0.99
179_S	184_N	0.908	0.99
248_I	251_Y	0.906	0.99
89_L	134_F	0.906	0.99
386_S	394_T	0.902	0.99
242_A	245_T	0.902	0.99
366_I	377_F	0.901	0.99
287_G	294_I	0.900	0.99
238_L	242_A	0.899	0.99
397_L	400_E	0.898	0.99
361_I	412_I	0.893	0.99
384_T	409_I	0.891	0.99
25_F	414_F	0.887	0.99
144_A	172_A	0.884	0.99
329_Y	349_I	0.883	0.99
140_I	173_F	0.882	0.99
233_T	339_F	0.880	0.99
185_L	194_V	0.879	0.99
23_G	91_F	0.878	0.99
247_F	269_S	0.878	0.99
150_I	193_T	0.877	0.99
176_A	278_T	0.871	0.99
53_T	80_I	0.871	0.99
40_S	47_W	0.870	0.99
302_F	358_S	0.870	0.99
268_A	283_S	0.868	0.99
204_T	212_L	0.865	0.99
180_L	188_Y	0.862	0.99
301_M	391_V	0.860	0.99
57_A	80_I	0.859	0.99
81_M	84_I	0.853	0.99
148_L	185_L	0.844	0.98
227_H	233_T	0.844	0.98
405_G	409_I	0.840	0.98
232_L	320_I	0.840	0.98
55_A	423_F	0.838	0.98
142_L	146_L	0.832	0.98
189_V	260_L	0.831	0.98
383_E	398_T	0.830	0.98
239_N	243_M	0.829	0.98
40_S	73_T	0.829	0.98
276_P	393_L	0.828	0.98
220_R	223_T	0.827	0.98
26_L	30_I	0.827	0.98
68_T	72_F	0.827	0.98
229_K	339_F	0.824	0.98
161_G	164_A	0.822	0.98
324_T	338_I	0.820	0.98
191_D	194_V	0.818	0.98
324_T	336_T	0.818	0.98
369_L	380_I	0.818	0.98
287_G	395_M	0.815	0.98
243_M	273_A	0.813	0.98
307_S	316_L	0.813	0.98
388_F	412_I	0.811	0.98
44_P	73_T	0.810	0.98
199_T	243_M	0.809	0.98
185_L	188_Y	0.805	0.98
84_I	174_N	0.804	0.98
37_L	75_F	0.804	0.98
291_E	378_L	0.802	0.98
191_D	195_N	0.801	0.98
203_I	235_T	0.800	0.98
370_T	377_F	0.795	0.98
145_A	149_S	0.793	0.98
273_A	300_L	0.793	0.98
230_L	233_T	0.790	0.98
111_R	125_G	0.788	0.98
136_F	140_I	0.787	0.98
125_G	128_G	0.786	0.98
242_A	248_I	0.783	0.97
81_M	171_S	0.782	0.97
263_V	266_L	0.777	0.97
28_I	58_T	0.777	0.97
68_T	80_I	0.776	0.97
211_V	227_H	0.775	0.97
247_F	293_T	0.774	0.97
132_V	213_F	0.766	0.97
146_L	149_S	0.763	0.97
199_T	203_I	0.763	0.97
58_T	83_L	0.762	0.97
326_V	357_T	0.761	0.97
247_F	250_E	0.761	0.97
37_L	41_T	0.760	0.97
326_V	353_A	0.760	0.97
301_M	386_S	0.759	0.97
245_T	249_L	0.757	0.97
206_G	305_A	0.757	0.97
239_N	242_A	0.756	0.97
272_Q	297_T	0.756	0.97
259_H	265_K	0.754	0.97
212_L	224_F	0.751	0.97
229_K	232_L	0.749	0.97
28_I	55_A	0.748	0.97
33_V	51_L	0.748	0.97
357_T	421_L	0.745	0.97
325_S	348_I	0.745	0.97
207_I	230_L	0.745	0.97
284_L	289_M	0.745	0.97
243_M	247_F	0.744	0.97
164_A	168_H	0.741	0.97
272_Q	286_F	0.739	0.96
230_L	324_T	0.738	0.96
247_F	262_I	0.734	0.96
47_W	407_C	0.731	0.96
234_G	316_L	0.731	0.96
328_A	336_T	0.730	0.96
175_N	277_R	0.728	0.96
73_T	76_G	0.724	0.96
41_T	45_L	0.723	0.96
382_F	393_L	0.723	0.96
128_G	131_K	0.723	0.96
33_V	36_M	0.718	0.96
53_T	64_A	0.716	0.96
162_L	165_S	0.716	0.96
262_I	265_K	0.716	0.96
298_L	378_L	0.716	0.96
260_L	265_K	0.713	0.96
94_F	134_F	0.710	0.96
203_I	237_M	0.708	0.95
70_T	182_P	0.708	0.95
378_L	395_M	0.707	0.95
167_F	171_S	0.705	0.95
66_V	69_G	0.705	0.95
25_F	423_F	0.704	0.95
289_M	293_T	0.703	0.95
139_S	143_I	0.701	0.95
48_I	409_I	0.701	0.95
41_T	71_Q	0.701	0.95
270_Y	274_V	0.700	0.95
322_I	352_L	0.697	0.95
230_L	320_I	0.695	0.95
241_I	270_Y	0.692	0.95
322_I	326_V	0.689	0.95
400_E	403_T	0.687	0.95
295_V	377_F	0.687	0.95
385_F	389_G	0.686	0.95
45_L	65_V	0.686	0.95
366_I	370_T	0.684	0.95
207_I	212_L	0.683	0.95
150_I	165_S	0.682	0.94
175_N	205_G	0.682	0.94
372_T	408_I	0.681	0.94
175_N	279_A	0.681	0.94
214_D	228_T	0.679	0.94
292_G	371_I	0.679	0.94
234_G	238_L	0.678	0.94
236_L	303_I	0.677	0.94
136_F	212_L	0.677	0.94
358_S	389_G	0.676	0.94
168_H	198_I	0.675	0.94
64_A	80_I	0.675	0.94
369_L	372_T	0.673	0.94
233_T	237_M	0.673	0.94
244_L	247_F	0.673	0.94
66_V	71_Q	0.671	0.94
144_A	147_I	0.671	0.94
299_L	363_F	0.671	0.94
328_A	345_Y	0.670	0.94
212_L	216_M	0.666	0.94
70_T	181_W	0.663	0.94
186_M	283_S	0.661	0.94
41_T	44_P	0.660	0.93
272_Q	275_T	0.660	0.93
382_F	394_T	0.660	0.93
266_L	270_Y	0.659	0.93
186_M	189_V	0.659	0.93
420_P	424_V	0.659	0.93
111_R	127_I	0.657	0.93
195_N	272_Q	0.656	0.93
159_S	163_F	0.656	0.93
175_N	310_T	0.656	0.93
260_L	264_D	0.654	0.93
84_I	281_F	0.653	0.93
20_L	23_G	0.653	0.93
233_T	236_L	0.647	0.93
227_H	230_L	0.646	0.93
141_E	145_A	0.644	0.93
249_L	371_I	0.644	0.93
29_I	32_A	0.644	0.93
369_L	408_I	0.643	0.93
106_I	127_I	0.642	0.93
210_T	308_A	0.642	0.93
314_I	355_S	0.641	0.92
415_I	423_F	0.641	0.92
137_S	174_N	0.641	0.92
282_N	285_D	0.640	0.92
276_P	300_L	0.640	0.92
42_T	76_G	0.639	0.92
63_L	387_A	0.638	0.92
276_P	286_F	0.636	0.92
322_I	356_V	0.634	0.92
84_I	170_I	0.634	0.92
295_V	366_I	0.634	0.92
32_A	54_A	0.633	0.92
310_T	315_K	0.633	0.92
366_I	385_F	0.632	0.92
161_G	188_Y	0.631	0.92
403_T	406_K	0.629	0.92
377_F	380_I	0.627	0.92
238_L	241_I	0.626	0.92
246_V	249_L	0.624	0.91
221_F	224_F	0.624	0.91
85_Q	137_S	0.623	0.91
63_L	386_S	0.621	0.91
163_F	167_F	0.620	0.91
232_L	316_L	0.615	0.91
362_V	384_T	0.615	0.91
324_T	327_I	0.612	0.91
231_M	306_G	0.610	0.90
295_V	299_L	0.609	0.90
282_N	393_L	0.609	0.90
169_A	201_L	0.609	0.90
63_L	394_T	0.609	0.90
139_S	142_L	0.608	0.90
406_K	410_I	0.607	0.90
40_S	50_A	0.606	0.90
217_K	221_F	0.604	0.90
67_D	399_P	0.603	0.90
224_F	228_T	0.603	0.90
222_K	225_S	0.601	0.90
225_S	233_T	0.601	0.90
228_T	339_F	0.600	0.90
64_A	171_S	0.600	0.90
193_T	196_L	0.596	0.89
360_F	364_L	0.595	0.89
69_G	77_Q	0.594	0.89
231_M	234_G	0.593	0.89
298_L	302_F	0.593	0.89
375_A	401_L	0.592	0.89
185_L	195_N	0.591	0.89
36_M	44_P	0.590	0.89
164_A	180_L	0.590	0.89
226_L	230_L	0.589	0.89
225_S	228_T	0.589	0.89
330_L	428_A	0.587	0.89
134_F	138_I	0.587	0.89
227_H	339_F	0.586	0.89
362_V	381_V	0.583	0.88
142_L	145_A	0.579	0.88
71_Q	182_P	0.579	0.88
151_R	188_Y	0.579	0.88
50_A	54_A	0.578	0.88
393_L	398_T	0.578	0.88
66_V	80_I	0.577	0.88
111_R	114_V	0.575	0.88
184_N	391_V	0.574	0.88
388_F	420_P	0.574	0.88
266_L	269_S	0.572	0.87
179_S	183_D	0.571	0.87
361_I	388_F	0.570	0.87
272_Q	289_M	0.569	0.87
334_K	432_Q	0.569	0.87
63_L	393_L	0.568	0.87
168_H	281_F	0.566	0.87
380_I	397_L	0.566	0.87
369_L	375_A	0.564	0.87
273_A	297_T	0.564	0.87
398_T	401_L	0.563	0.87
25_F	29_I	0.561	0.86
221_F	225_S	0.560	0.86
49_D	399_P	0.560	0.86
240_A	273_A	0.560	0.86
59_T	312_S	0.560	0.86
381_V	385_F	0.559	0.86
275_T	286_F	0.559	0.86
137_S	141_E	0.559	0.86
271_F	281_F	0.556	0.86
301_M	389_G	0.555	0.86
305_A	316_L	0.554	0.86
141_E	170_I	0.553	0.86
230_L	234_G	0.552	0.86
275_T	393_L	0.551	0.85
361_I	365_G	0.548	0.85
129_L	309_S	0.548	0.85
65_V	406_K	0.548	0.85
246_V	250_E	0.548	0.85
39_I	76_G	0.547	0.85
227_H	232_L	0.546	0.85
298_L	395_M	0.546	0.85
243_M	270_Y	0.546	0.85
326_V	356_V	0.544	0.85
382_F	386_S	0.544	0.85
182_P	397_L	0.543	0.85
185_L	271_F	0.542	0.85
278_T	312_S	0.542	0.85
383_E	386_S	0.539	0.84
394_T	398_T	0.539	0.84
282_N	286_F	0.538	0.84
141_E	173_F	0.537	0.84
29_I	238_L	0.537	0.84
202_F	273_A	0.537	0.84
60_V	278_T	0.537	0.84
184_N	188_Y	0.536	0.84
369_L	383_E	0.535	0.84
383_E	393_L	0.535	0.84
241_I	244_L	0.534	0.84
78_T	81_M	0.534	0.84
239_N	270_Y	0.534	0.84
71_Q	74_V	0.534	0.84
64_A	282_N	0.533	0.84
383_E	409_I	0.533	0.84
46_S	50_A	0.532	0.83
337_V	342_S	0.529	0.83
329_Y	353_A	0.528	0.83
17_P	425_F	0.527	0.83
224_F	230_L	0.526	0.83
292_G	370_T	0.526	0.83
56_S	62_G	0.526	0.83
210_T	214_D	0.525	0.83
379_Q	401_L	0.525	0.83
166_L	169_A	0.524	0.83
93_T	97_L	0.523	0.82
400_E	404_A	0.523	0.82
203_I	238_L	0.523	0.82
170_I	174_N	0.523	0.82
206_G	279_A	0.522	0.82
140_I	205_G	0.522	0.82
356_V	360_F	0.521	0.82
245_T	269_S	0.521	0.82
63_L	383_E	0.521	0.82
57_A	83_L	0.520	0.82
45_L	50_A	0.520	0.82
56_S	61_T	0.520	0.82
64_A	69_G	0.519	0.82
82_G	170_I	0.519	0.82
375_A	379_Q	0.518	0.82
236_L	316_L	0.518	0.82
148_L	281_F	0.518	0.82
243_M	269_S	0.516	0.82
228_T	233_T	0.516	0.82
380_I	384_T	0.515	0.81
195_N	271_F	0.512	0.81
198_I	281_F	0.512	0.81
291_E	294_I	0.511	0.81
75_F	78_T	0.508	0.81
185_L	283_S	0.507	0.80
345_Y	348_I	0.506	0.80
61_T	390_T	0.506	0.80
16_P	19_V	0.506	0.80
45_L	49_D	0.506	0.80
228_T	320_I	0.506	0.80
60_V	175_N	0.505	0.80
369_L	387_A	0.504	0.80
358_S	362_V	0.504	0.80
184_N	283_S	0.504	0.80
139_S	200_F	0.504	0.80
133_L	417_R	0.503	0.80
211_V	231_M	0.503	0.80
383_E	387_A	0.503	0.80
143_I	147_I	0.501	0.80
89_L	133_L	0.501	0.80
50_A	72_F	0.500	0.80
219_R	222_K	0.500	0.80

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4j7cI	2	0.964	100	0.147	Contact Map
3pjzA	2	0.9034	100	0.197	Contact Map
3ukmA	2	0.4944	96.3	0.939	Contact Map
4bw5A	2	0.5079	95.6	0.943	Contact Map
4twkA	2	0.4539	94.7	0.946	Contact Map
4wfeA	2	0.4315	92.2	0.951	Contact Map
1lnqA	6	0.1933	91.7	0.951	Contact Map
2k1eA	3	0.2157	91	0.952	Contact Map
2ih3C	4	0.2022	86.9	0.956	Contact Map
3effK	4	0.2225	84.9	0.957	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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