YOJK - BACSU - GREMLIN Contacts

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YOJK - Uncharacterized UDP-glucosyltransferase YojK

UniProt:	O31853	Sequences: MANVLMIGFPGEGHINPSIGVMKELKSRGENITYYAVKEYKEKITALDIEFREYHDFRGDYFGKNATGDEERDFTEMLCAFLKACKDIATHIYEEVKHESYDYVIYDHHLLAGKVIANMLKLPRFSLCTTFAMNEEFAKEMMGAYMKGSLEDSPHYESYQQLAETLNADFQAEIKKPFDVFLADGDLTIVFTSRGFQPLAEQFGERYVFVGPSITERAGNNDFPFDQIDNENVLFISMGTIFNNQKQFFNQCLEVCKDFDGKVVLSIGKHIKTSELNDIPENFIVRPYVPQLEILKRASLFVTHGGMNSTSEGLYFETPLVVIPMGGDQFVVADQVEKVGAGKVIKKEELSESLLKETIQEVMNNRSYAEKAKEIGQSLKAAGGSKKAADSILEAVKQKTQSANA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	405 (387)
Sequences:	12778 (10123)
Seq/√Len:	514.6

ECOLI - MURG
BACSU - YOJK YDHE YJIC MURG YKON UGTP SPSG

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
321_V	362_V	4.366	1.00
371_K	374_E	4.309	1.00
336_V	342_G	3.900	1.00
305_G	322_V	3.777	1.00
258_D	356_K	3.675	1.00
322_V	333_A	3.392	1.00
6_M	22_M	3.341	1.00
254_E	352_E	3.145	1.00
376_G	380_K	3.048	1.00
361_E	365_N	2.958	1.00
356_K	360_Q	2.903	1.00
41_K	45_T	2.899	1.00
303_T	320_L	2.703	1.00
343_K	361_E	2.605	1.00
369_A	373_K	2.534	1.00
28_R	393_L	2.512	1.00
195_G	378_S	2.387	1.00
301_F	309_S	2.372	1.00
360_Q	364_N	2.317	1.00
24_E	27_S	2.306	1.00
106_Y	124_R	2.288	1.00
193_S	379_L	2.225	1.00
251_Q	352_E	2.220	1.00
224_P	227_Q	2.156	1.00
313_G	320_L	2.134	1.00
283_F	286_R	2.130	1.00
321_V	358_T	2.125	1.00
373_K	376_G	2.120	1.00
310_T	336_V	2.092	1.00
317_E	372_A	2.090	1.00
337_E	344_V	2.052	1.00
377_Q	381_A	2.045	1.00
341_A	375_I	2.019	1.00
296_K	316_F	1.960	1.00
31_N	50_E	1.923	1.00
158_S	161_Q	1.877	1.00
258_D	352_E	1.873	1.00
24_E	28_R	1.868	1.00
223_F	227_Q	1.868	1.00
224_P	228_I	1.866	1.00
259_F	360_Q	1.811	1.00
343_K	362_V	1.788	1.00
256_C	263_V	1.771	1.00
125_F	187_L	1.751	1.00
370_E	374_E	1.745	1.00
250_N	254_E	1.745	1.00
300_L	359_I	1.726	1.00
314_L	341_A	1.723	1.00
117_A	124_R	1.720	1.00
383_G	386_K	1.712	1.00
236_I	256_C	1.712	1.00
22_M	49_I	1.704	1.00
157_E	161_Q	1.698	1.00
286_R	289_V	1.683	1.00
374_E	378_S	1.675	1.00
85_C	112_A	1.672	1.00
362_V	368_Y	1.663	1.00
314_L	372_A	1.651	1.00
264_V	294_I	1.638	1.00
85_C	88_I	1.633	1.00
340_G	371_K	1.631	1.00
336_V	341_A	1.630	1.00
334_D	338_K	1.618	1.00
343_K	358_T	1.592	1.00
301_F	313_G	1.588	1.00
28_R	389_A	1.583	1.00
192_T	197_Q	1.583	1.00
275_E	278_D	1.573	1.00
340_G	367_S	1.559	1.00
235_F	291_Q	1.546	1.00
85_C	89_A	1.531	1.00
5_L	35_Y	1.526	1.00
6_M	105_I	1.521	1.00
255_V	355_L	1.518	1.00
90_T	94_E	1.516	1.00
343_K	368_Y	1.508	1.00
118_N	184_D	1.491	1.00
13_G	17_P	1.488	1.00
335_Q	338_K	1.484	1.00
234_L	302_V	1.482	1.00
33_T	52_R	1.471	1.00
365_N	368_Y	1.465	1.00
4_V	103_Y	1.459	1.00
30_E	393_L	1.451	1.00
279_I	285_V	1.447	1.00
361_E	368_Y	1.429	1.00
82_L	86_K	1.415	1.00
221_N	227_Q	1.410	1.00
246_K	250_N	1.408	1.00
91_H	95_E	1.406	1.00
28_R	390_D	1.405	1.00
228_I	262_K	1.404	1.00
255_V	356_K	1.399	1.00
377_Q	380_K	1.398	1.00
161_Q	167_N	1.385	1.00
257_K	278_D	1.369	1.00
390_D	394_E	1.369	1.00
91_H	94_E	1.368	1.00
230_N	298_A	1.366	1.00
208_V	391_S	1.363	1.00
14_H	107_D	1.360	1.00
106_Y	113_G	1.359	1.00
357_E	361_E	1.358	1.00
373_K	377_Q	1.356	1.00
315_Y	380_K	1.355	1.00
257_K	282_N	1.344	1.00
370_E	373_K	1.343	1.00
84_A	87_D	1.338	1.00
93_Y	119_M	1.330	1.00
79_C	83_K	1.327	1.00
221_N	224_P	1.326	1.00
351_S	354_L	1.317	1.00
352_E	356_K	1.307	1.00
83_K	86_K	1.304	1.00
73_D	76_E	1.299	1.00
225_F	228_I	1.292	1.00
104_V	122_L	1.291	1.00
322_V	336_V	1.291	1.00
229_D	262_K	1.288	1.00
279_I	282_N	1.288	1.00
38_K	53_E	1.285	1.00
231_E	262_K	1.280	1.00
40_Y	43_K	1.275	1.00
6_M	18_S	1.274	1.00
26_K	49_I	1.269	1.00
4_V	30_E	1.266	1.00
163_A	167_N	1.265	1.00
155_H	159_Y	1.255	1.00
148_G	151_E	1.253	1.00
346_K	349_E	1.250	1.00
255_V	352_E	1.245	1.00
279_I	283_F	1.235	1.00
233_V	300_L	1.230	1.00
320_L	336_V	1.230	1.00
291_Q	312_E	1.225	1.00
41_K	51_F	1.225	1.00
155_H	158_S	1.215	1.00
387_K	391_S	1.203	1.00
254_E	257_K	1.201	1.00
84_A	88_I	1.195	1.00
261_G	360_Q	1.190	1.00
251_Q	254_E	1.190	1.00
156_Y	160_Q	1.189	1.00
385_S	389_A	1.177	1.00
155_H	160_Q	1.168	1.00
329_Q	332_V	1.167	1.00
104_V	117_A	1.164	1.00
138_A	141_M	1.163	1.00
345_I	358_T	1.162	1.00
12_E	16_N	1.160	1.00
83_K	87_D	1.158	1.00
320_L	342_G	1.152	1.00
317_E	376_G	1.151	1.00
70_E	73_D	1.151	1.00
282_N	286_R	1.150	1.00
235_F	266_S	1.149	1.00
374_E	377_Q	1.148	1.00
5_L	101_Y	1.146	1.00
255_V	359_I	1.146	1.00
158_S	162_L	1.145	1.00
301_F	318_T	1.145	1.00
310_T	320_L	1.143	1.00
24_E	389_A	1.142	1.00
161_Q	165_T	1.141	1.00
187_L	208_V	1.141	1.00
84_A	89_A	1.137	1.00
157_E	160_Q	1.133	1.00
87_D	90_T	1.131	1.00
18_S	34_Y	1.123	1.00
354_L	358_T	1.115	1.00
302_V	355_L	1.112	1.00
366_R	370_E	1.111	1.00
8_G	18_S	1.109	1.00
76_E	79_C	1.106	1.00
232_N	299_S	1.100	1.00
140_E	143_G	1.099	1.00
94_E	97_K	1.096	1.00
11_G	241_I	1.093	1.00
367_S	370_E	1.092	1.00
143_G	147_K	1.089	1.00
42_E	45_T	1.080	1.00
321_V	343_K	1.074	1.00
387_K	390_D	1.070	1.00
253_L	265_L	1.069	1.00
253_L	283_F	1.067	1.00
235_F	289_V	1.066	1.00
82_L	85_C	1.066	1.00
24_E	385_S	1.060	1.00
43_K	46_A	1.060	1.00
382_A	387_K	1.057	1.00
160_Q	167_N	1.052	1.00
82_L	88_I	1.046	1.00
103_Y	125_F	1.043	1.00
223_F	226_D	1.041	1.00
391_S	394_E	1.038	1.00
233_V	262_K	1.037	1.00
90_T	93_Y	1.035	1.00
367_S	371_K	1.035	1.00
221_N	293_E	1.032	1.00
292_L	316_F	1.029	1.00
21_V	213_S	1.029	1.00
274_S	278_D	1.029	1.00
144_A	147_K	1.026	1.00
40_Y	44_I	1.023	1.00
168_A	171_Q	1.018	1.00
159_Y	163_A	1.011	1.00
160_Q	164_E	1.009	1.00
341_A	372_A	1.009	1.00
160_Q	166_L	1.003	1.00
242_F	325_M	1.000	1.00
221_N	228_I	0.994	1.00
378_S	381_A	0.994	1.00
249_F	267_I	0.992	1.00
38_K	41_K	0.990	1.00
295_L	301_F	0.988	1.00
258_D	353_S	0.987	1.00
235_F	298_A	0.983	1.00
4_V	25_L	0.981	1.00
291_Q	295_L	0.975	1.00
143_G	146_M	0.969	1.00
42_E	46_A	0.967	1.00
386_K	390_D	0.965	1.00
172_A	176_K	0.964	1.00
337_E	343_K	0.957	1.00
305_G	333_A	0.957	1.00
23_K	27_S	0.956	1.00
118_N	186_D	0.953	1.00
162_L	167_N	0.953	1.00
22_M	32_I	0.952	1.00
261_G	363_M	0.948	1.00
88_I	91_H	0.948	1.00
156_Y	163_A	0.944	1.00
33_T	99_E	0.944	1.00
334_D	337_E	0.943	1.00
93_Y	96_V	0.942	1.00
314_L	375_I	0.942	1.00
310_T	332_V	0.935	1.00
24_E	386_K	0.932	1.00
78_L	81_F	0.931	1.00
274_S	277_N	0.930	1.00
80_A	84_A	0.927	1.00
114_K	124_R	0.924	1.00
125_F	395_A	0.924	1.00
389_A	393_L	0.924	1.00
161_Q	164_E	0.920	1.00
261_G	364_N	0.920	1.00
156_Y	161_Q	0.918	1.00
302_V	323_I	0.916	1.00
281_E	286_R	0.915	1.00
280_P	283_F	0.912	1.00
32_I	49_I	0.911	1.00
384_G	389_A	0.908	1.00
231_E	260_D	0.902	1.00
41_K	44_I	0.902	1.00
88_I	93_Y	0.902	1.00
354_L	357_E	0.900	1.00
333_A	344_V	0.900	1.00
116_I	120_L	0.899	1.00
181_F	184_D	0.899	1.00
26_K	32_I	0.897	1.00
335_Q	339_V	0.897	1.00
235_F	294_I	0.896	1.00
86_K	89_A	0.890	1.00
6_M	25_L	0.888	1.00
75_T	79_C	0.886	1.00
160_Q	163_A	0.886	1.00
140_E	145_Y	0.883	1.00
162_L	165_T	0.880	1.00
276_L	279_I	0.878	1.00
159_Y	166_L	0.875	1.00
139_K	144_A	0.873	1.00
173_E	176_K	0.871	1.00
155_H	161_Q	0.866	1.00
259_F	356_K	0.864	1.00
163_A	166_L	0.863	1.00
164_E	167_N	0.863	1.00
290_P	293_E	0.859	1.00
142_M	146_M	0.858	1.00
236_I	302_V	0.855	1.00
33_T	50_E	0.854	1.00
231_E	261_G	0.850	1.00
255_V	259_F	0.848	1.00
76_E	80_A	0.844	1.00
252_C	256_C	0.841	1.00
36_A	51_F	0.837	1.00
368_Y	372_A	0.834	1.00
168_A	172_A	0.833	1.00
245_Q	248_F	0.833	1.00
169_D	172_A	0.833	1.00
234_L	261_G	0.832	1.00
350_L	355_L	0.830	1.00
157_E	163_A	0.830	1.00
162_L	166_L	0.828	1.00
281_E	284_I	0.828	1.00
159_Y	167_N	0.828	1.00
215_T	218_A	0.820	1.00
142_M	145_Y	0.816	1.00
156_Y	159_Y	0.814	1.00
139_K	145_Y	0.813	1.00
80_A	83_K	0.811	1.00
87_D	91_H	0.808	1.00
236_I	263_V	0.806	1.00
138_A	142_M	0.805	1.00
225_F	290_P	0.803	1.00
303_T	310_T	0.794	1.00
97_K	120_L	0.794	1.00
81_F	85_C	0.792	1.00
150_L	154_P	0.791	1.00
139_K	142_M	0.789	1.00
19_I	23_K	0.786	1.00
189_I	210_V	0.786	1.00
187_L	391_S	0.785	1.00
237_S	309_S	0.785	1.00
229_D	232_N	0.784	1.00
304_H	308_N	0.784	1.00
159_Y	162_L	0.783	1.00
156_Y	167_N	0.781	1.00
156_Y	164_E	0.781	1.00
375_I	378_S	0.779	1.00
141_M	145_Y	0.777	1.00
193_S	382_A	0.775	1.00
251_Q	350_L	0.775	1.00
86_K	90_T	0.773	1.00
318_T	369_A	0.769	1.00
177_P	180_V	0.768	1.00
140_E	146_M	0.764	1.00
158_S	165_T	0.763	1.00
264_V	284_I	0.760	1.00
75_T	78_L	0.759	1.00
222_D	226_D	0.756	1.00
226_D	297_R	0.754	1.00
10_P	14_H	0.752	1.00
197_Q	200_A	0.751	1.00
291_Q	308_N	0.743	1.00
368_Y	371_K	0.743	1.00
303_T	322_V	0.743	1.00
341_A	371_K	0.742	1.00
92_I	96_V	0.739	1.00
106_Y	114_K	0.737	1.00
251_Q	255_V	0.736	1.00
266_S	291_Q	0.736	1.00
21_V	388_A	0.734	1.00
161_Q	166_L	0.734	1.00
141_M	144_A	0.731	1.00
302_V	321_V	0.730	1.00
262_K	284_I	0.726	1.00
138_A	144_A	0.721	1.00
211_G	214_I	0.719	1.00
74_F	81_F	0.717	1.00
303_T	309_S	0.713	1.00
89_A	95_E	0.712	1.00
292_L	312_E	0.712	1.00
156_Y	166_L	0.711	1.00
7_I	113_G	0.711	1.00
109_H	327_G	0.711	1.00
44_I	51_F	0.708	1.00
30_E	102_D	0.707	1.00
198_P	335_Q	0.707	1.00
157_E	165_T	0.707	1.00
159_Y	165_T	0.705	1.00
20_G	24_E	0.704	1.00
308_N	312_E	0.703	1.00
384_G	388_A	0.701	1.00
228_I	284_I	0.700	1.00
238_M	323_I	0.697	1.00
148_G	154_P	0.697	1.00
196_F	339_V	0.697	1.00
48_D	52_R	0.694	1.00
379_L	382_A	0.693	1.00
90_T	95_E	0.692	1.00
253_L	279_I	0.691	1.00
240_T	288_Y	0.691	1.00
224_P	284_I	0.689	1.00
88_I	96_V	0.687	1.00
13_G	308_N	0.687	1.00
157_E	166_L	0.687	1.00
353_S	357_E	0.686	1.00
314_L	379_L	0.686	1.00
240_T	329_Q	0.684	1.00
235_F	239_G	0.683	1.00
103_Y	396_V	0.681	1.00
323_I	350_L	0.678	1.00
293_E	296_K	0.677	1.00
159_Y	164_E	0.677	1.00
73_D	81_F	0.676	1.00
158_S	163_A	0.676	1.00
372_A	376_G	0.675	1.00
72_R	75_T	0.675	1.00
210_V	213_S	0.675	1.00
392_I	396_V	0.674	1.00
52_R	95_E	0.673	1.00
74_F	77_M	0.673	1.00
237_S	301_F	0.673	1.00
232_N	261_G	0.670	1.00
69_D	73_D	0.669	1.00
291_Q	301_F	0.663	1.00
303_T	313_G	0.662	1.00
48_D	51_F	0.660	1.00
89_A	93_Y	0.658	1.00
105_I	189_I	0.658	1.00
288_Y	291_Q	0.657	1.00
383_G	387_K	0.655	1.00
336_V	340_G	0.652	1.00
13_G	16_N	0.652	1.00
72_R	76_E	0.650	1.00
333_A	342_G	0.649	1.00
7_I	110_L	0.648	1.00
257_K	260_D	0.648	1.00
13_G	19_I	0.648	1.00
114_K	118_N	0.646	1.00
71_E	77_M	0.646	1.00
151_E	154_P	0.645	1.00
304_H	309_S	0.644	1.00
35_Y	92_I	0.644	1.00
132_A	197_Q	0.641	1.00
208_V	387_K	0.638	1.00
142_M	147_K	0.635	1.00
73_D	77_M	0.635	1.00
138_A	145_Y	0.634	1.00
145_Y	148_G	0.634	1.00
260_D	282_N	0.633	1.00
264_V	289_V	0.633	1.00
71_E	74_F	0.631	1.00
160_Q	165_T	0.630	1.00
289_V	294_I	0.630	1.00
393_L	396_V	0.630	1.00
92_I	95_E	0.629	1.00
171_Q	176_K	0.629	1.00
195_G	381_A	0.629	1.00
170_F	173_E	0.629	1.00
54_Y	58_R	0.626	1.00
4_V	32_I	0.624	1.00
127_L	213_S	0.623	1.00
234_L	359_I	0.621	1.00
168_A	173_E	0.620	1.00
334_D	344_V	0.618	1.00
237_S	291_Q	0.618	1.00
33_T	101_Y	0.615	1.00
188_T	207_Y	0.615	1.00
156_Y	162_L	0.615	1.00
79_C	82_L	0.615	1.00
242_F	326_G	0.614	1.00
275_E	279_I	0.614	1.00
260_D	281_E	0.613	1.00
49_I	52_R	0.610	1.00
69_D	72_R	0.609	1.00
157_E	162_L	0.608	1.00
90_T	119_M	0.608	1.00
321_V	345_I	0.607	1.00
157_E	164_E	0.605	1.00
87_D	93_Y	0.605	1.00
187_L	191_F	0.604	1.00
310_T	329_Q	0.603	1.00
346_K	354_L	0.603	1.00
18_S	127_L	0.602	1.00
50_E	53_E	0.602	1.00
137_F	141_M	0.601	0.99
70_E	74_F	0.601	0.99
11_G	14_H	0.601	0.99
350_L	354_L	0.600	0.99
129_T	329_Q	0.599	0.99
38_K	55_H	0.598	0.99
47_L	50_E	0.598	0.99
328_D	332_V	0.594	0.99
94_E	98_H	0.594	0.99
20_G	23_K	0.594	0.99
67_T	70_E	0.594	0.99
251_Q	355_L	0.592	0.99
179_D	182_L	0.591	0.99
275_E	280_P	0.590	0.99
357_E	360_Q	0.589	0.99
390_D	393_L	0.587	0.99
191_F	311_S	0.585	0.99
366_R	369_A	0.581	0.99
148_G	152_D	0.578	0.99
115_V	181_F	0.577	0.99
385_S	390_D	0.575	0.99
140_E	144_A	0.575	0.99
157_E	167_N	0.575	0.99
90_T	96_V	0.574	0.99
71_E	80_A	0.574	0.99
69_D	74_F	0.574	0.99
244_N	268_G	0.574	0.99
67_T	71_E	0.573	0.99
71_E	75_T	0.573	0.99
307_M	311_S	0.573	0.99
221_N	226_D	0.571	0.99
78_L	82_L	0.570	0.99
239_G	306_G	0.569	0.99
72_R	77_M	0.568	0.99
339_V	375_I	0.568	0.99
131_F	134_N	0.567	0.99
210_V	388_A	0.563	0.99
158_S	167_N	0.562	0.99
31_N	99_E	0.561	0.99
15_I	34_Y	0.559	0.99
26_K	47_L	0.558	0.99
242_F	327_G	0.555	0.99
149_S	154_P	0.555	0.99
319_P	369_A	0.555	0.99
48_D	53_E	0.554	0.99
132_A	135_E	0.553	0.99
139_K	147_K	0.551	0.99
385_S	388_A	0.550	0.99
304_H	329_Q	0.549	0.99
240_T	332_V	0.549	0.99
371_K	375_I	0.549	0.99
155_H	165_T	0.548	0.99
84_A	93_Y	0.547	0.99
144_A	148_G	0.546	0.99
224_P	290_P	0.545	0.99
88_I	92_I	0.544	0.99
36_A	40_Y	0.544	0.99
155_H	167_N	0.541	0.99
17_P	308_N	0.540	0.99
4_V	392_I	0.539	0.99
234_L	363_M	0.538	0.99
190_V	207_Y	0.538	0.99
97_K	100_S	0.536	0.99
25_L	32_I	0.536	0.99
158_S	166_L	0.534	0.99
375_I	379_L	0.534	0.99
124_R	186_D	0.533	0.99
306_G	328_D	0.532	0.99
330_F	333_A	0.532	0.99
126_S	185_G	0.532	0.99
47_L	52_R	0.529	0.99
149_S	153_S	0.529	0.99
150_L	153_S	0.528	0.99
361_E	367_S	0.528	0.99
156_Y	165_T	0.527	0.99
141_M	146_M	0.527	0.99
236_I	252_C	0.526	0.99
324_P	344_V	0.526	0.99
138_A	143_G	0.525	0.99
128_C	135_E	0.524	0.99
79_C	86_K	0.523	0.99
67_T	72_R	0.523	0.99
90_T	169_D	0.523	0.99
193_S	196_F	0.523	0.99
324_P	329_Q	0.522	0.99
169_D	176_K	0.522	0.99
126_S	188_T	0.521	0.99
264_V	298_A	0.521	0.99
217_R	220_N	0.521	0.99
233_V	299_S	0.519	0.99
68_G	72_R	0.518	0.99
74_F	78_L	0.517	0.98
95_E	98_H	0.516	0.98
358_T	361_E	0.515	0.98
128_C	132_A	0.514	0.98
214_I	315_Y	0.513	0.98
51_F	54_Y	0.512	0.98
77_M	81_F	0.512	0.98
113_G	117_A	0.512	0.98
235_F	301_F	0.511	0.98
29_G	48_D	0.511	0.98
196_F	212_P	0.511	0.98
252_C	355_L	0.511	0.98
80_A	85_C	0.511	0.98
99_E	102_D	0.509	0.98
167_N	172_A	0.509	0.98
244_N	252_C	0.508	0.98
254_E	356_K	0.507	0.98
250_N	352_E	0.506	0.98
224_P	286_R	0.506	0.98
85_C	93_Y	0.506	0.98
73_D	79_C	0.506	0.98
30_E	389_A	0.506	0.98
83_K	88_I	0.506	0.98
73_D	80_A	0.505	0.98
288_Y	297_R	0.505	0.98
140_E	147_K	0.504	0.98
52_R	58_R	0.504	0.98
41_K	53_E	0.504	0.98
72_R	80_A	0.504	0.98
291_Q	304_H	0.503	0.98
19_I	22_M	0.503	0.98
248_F	251_Q	0.502	0.98
93_Y	97_K	0.500	0.98

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2iyaA	1	0.9556	100	0.337	Contact Map
2pq6A	1	0.9333	100	0.355	Contact Map
3rscA	1	0.9679	100	0.359	Contact Map
1rrvA	1	0.9506	100	0.362	Contact Map
2iyfA	1	0.963	100	0.368	Contact Map
3ia7A	2	0.9654	100	0.377	Contact Map
2p6pA	2	0.9136	100	0.391	Contact Map
2vchA	1	0.963	100	0.395	Contact Map
3otiA	2	0.8889	100	0.406	Contact Map
3hbfA	1	0.9704	100	0.406	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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