YOJO - BACSU - GREMLIN Contacts

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YOJO - Uncharacterized protein YojO

UniProt:	O31849	Sequences: MKFIKFNDSTIDSFLFMMLTDLAKTLTKSEAVEVEYGVQSYYNPFEKKIYMSHFWKDRAAEDMEAGLKSDVYLRSVGTRYSSLHEFANFLNDIHRHLTFKSFAKQLFMLLEDIRIEECIKRERPGTKHVFAKRKDMYRKHFSTQLTLNLERSIFTDALFCAIYFKLTAESPLETLPSMREDIDLMRPFIEQQLLRVYEADSTRQVLKIVEDLMDGLEEVLDKDMLNTYFFLPELDYAKAAEQPLFEEEKKAPKLSDDITLPKQSDGDEDIHEEEMPTWHRETEAPSKSFLQFDIEHGAKSDLGKDASREGDDGDQALGSVQGSARQTKRKDYSKLEALESQKDQPNGAGMADGKENKYAFPIYKEPQPATSEEELSYKQQAKTIESYQKRLKQMIQKTLEHKKTLPRTDLHAGRLNNKLLRYFTERNPRLFYKKQEPSSEIDAVFTLLVDCSASMFDKMDETKRGIVLFHEALKSVAVPHQIVGFWEDTNDATEKSQPNYFNTVIPFQSSLRQDSGPAIMQLEPEEDNRDGYAIRQMTKKMLHRSEAQKFLIVFSDGEPAAFGYEQNGIVDTSEAVIEARKRGIEVINVFLSNSEIEESQMKTIQDMYGKFSIFVPDVDQLPDVLYPLLKKLLHKSIG	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	638 (567)
Sequences:	794 (663)
Seq/√Len:	27.8

BACSU - YOJO

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
628_L	631_K	5.573	1.00
538_T	579_A	5.306	1.00
448_L	551_L	5.280	1.00
201_S	204_Q	4.444	1.00
73_L	115_I	4.175	1.00
55_W	63_M	3.861	1.00
80_Y	122_E	3.679	1.00
19_L	23_A	3.200	1.00
356_N	359_A	3.137	1.00
73_L	112_D	3.098	1.00
73_L	77_G	2.945	1.00
43_N	49_I	2.942	1.00
106_L	158_L	2.900	1.00
276_P	280_R	2.858	1.00
77_G	112_D	2.845	1.00
577_I	581_K	2.821	1.00
70_D	74_R	2.813	1.00
481_Q	540_K	2.773	1.00
407_R	436_E	2.767	1.00
23_A	32_V	2.691	1.00
72_Y	129_V	2.664	0.99
276_P	290_L	2.621	0.99
542_L	584_I	2.607	0.99
271_H	280_R	2.595	0.99
576_V	586_V	2.576	0.99
528_N	608_Y	2.514	0.99
20_T	36_Y	2.514	0.99
528_N	555_S	2.513	0.99
615_V	625_L	2.505	0.99
269_D	276_P	2.479	0.99
451_C	484_G	2.454	0.99
530_D	555_S	2.399	0.99
23_A	28_K	2.386	0.99
110_L	162_I	2.340	0.99
131_A	169_E	2.330	0.99
280_R	284_A	2.311	0.99
530_D	608_Y	2.308	0.99
23_A	49_I	2.269	0.98
146_T	152_S	2.259	0.98
455_M	462_T	2.258	0.98
272_E	280_R	2.255	0.98
484_G	608_Y	2.240	0.98
535_R	578_E	2.201	0.98
450_D	454_S	2.190	0.98
176_P	180_E	2.136	0.98
266_G	274_E	2.114	0.97
275_M	281_E	2.108	0.97
448_L	553_V	2.104	0.97
454_S	556_D	2.096	0.97
452_S	556_D	2.096	0.97
52_S	70_D	2.067	0.97
77_G	115_I	2.054	0.97
461_E	464_R	2.036	0.97
41_Y	74_R	2.035	0.97
314_D	317_L	1.999	0.96
538_T	583_G	1.982	0.96
80_Y	553_V	1.982	0.96
263_Q	267_D	1.981	0.96
266_G	277_T	1.965	0.96
535_R	575_A	1.965	0.96
375_L	517_P	1.949	0.96
450_D	556_D	1.947	0.96
286_S	291_Q	1.933	0.95
274_E	283_E	1.902	0.95
238_K	291_Q	1.902	0.95
473_L	478_V	1.902	0.95
529_R	571_D	1.901	0.95
262_K	268_E	1.897	0.95
564_Y	568_G	1.884	0.95
20_T	31_A	1.883	0.95
407_R	434_K	1.875	0.95
312_D	317_L	1.829	0.94
271_H	276_P	1.818	0.94
413_G	419_L	1.813	0.94
32_V	47_K	1.806	0.93
408_T	413_G	1.799	0.93
555_S	608_Y	1.795	0.93
284_A	288_S	1.780	0.93
269_D	273_E	1.777	0.93
280_R	287_K	1.756	0.92
267_D	276_P	1.742	0.92
446_T	481_Q	1.742	0.92
43_N	74_R	1.738	0.92
180_E	184_L	1.727	0.92
454_S	557_G	1.722	0.92
452_S	557_G	1.722	0.92
276_P	281_E	1.719	0.92
307_S	310_G	1.707	0.91
272_E	276_P	1.704	0.91
66_G	70_D	1.703	0.91
271_H	286_S	1.691	0.91
280_R	283_E	1.691	0.91
24_K	41_Y	1.685	0.91
225_L	229_F	1.684	0.91
271_H	274_E	1.671	0.90
308_R	312_D	1.664	0.90
258_I	266_G	1.662	0.90
256_D	277_T	1.661	0.90
531_G	555_S	1.657	0.90
269_D	282_T	1.643	0.90
410_L	434_K	1.640	0.90
443_A	548_Q	1.640	0.90
380_Q	523_E	1.629	0.89
26_L	43_N	1.628	0.89
225_L	228_Y	1.598	0.88
135_D	179_R	1.595	0.88
149_L	156_D	1.587	0.88
267_D	280_R	1.578	0.88
377_Y	467_V	1.571	0.87
450_D	557_G	1.569	0.87
231_L	239_A	1.547	0.87
133_R	620_Q	1.538	0.86
531_G	571_D	1.535	0.86
592_S	603_T	1.534	0.86
165_K	194_L	1.532	0.86
263_Q	276_P	1.521	0.86
451_C	459_M	1.512	0.85
486_W	526_E	1.491	0.84
211_D	214_D	1.489	0.84
399_L	402_K	1.483	0.84
284_A	287_K	1.481	0.84
271_H	285_P	1.478	0.84
270_I	275_M	1.472	0.84
14_F	152_S	1.471	0.84
146_T	178_M	1.466	0.83
77_G	108_M	1.461	0.83
74_R	108_M	1.458	0.83
578_E	587_I	1.452	0.83
240_A	266_G	1.450	0.83
269_D	283_E	1.448	0.83
264_S	267_D	1.438	0.82
313_G	316_A	1.436	0.82
269_D	280_R	1.435	0.82
516_G	573_S	1.421	0.81
274_E	292_F	1.412	0.81
272_E	277_T	1.411	0.81
111_E	114_R	1.396	0.80
483_V	540_K	1.394	0.80
267_D	272_E	1.383	0.80
265_D	542_L	1.379	0.79
270_I	280_R	1.375	0.79
169_E	217_E	1.371	0.79
49_I	74_R	1.366	0.79
226_N	229_F	1.355	0.78
484_G	504_V	1.348	0.78
483_V	501_F	1.343	0.78
538_T	584_I	1.338	0.77
195_R	211_D	1.337	0.77
548_Q	568_G	1.333	0.77
311_D	316_A	1.327	0.77
237_A	304_K	1.326	0.77
274_E	280_R	1.322	0.76
216_L	466_I	1.319	0.76
420_L	424_T	1.318	0.76
394_M	443_A	1.314	0.76
61_E	65_A	1.314	0.76
276_P	287_K	1.312	0.76
505_I	621_L	1.307	0.76
173_E	176_P	1.303	0.75
128_H	169_E	1.293	0.75
279_H	291_Q	1.291	0.75
74_R	77_G	1.291	0.75
38_V	101_S	1.287	0.74
41_Y	52_S	1.284	0.74
237_A	240_A	1.281	0.74
259_T	265_D	1.279	0.74
611_F	617_D	1.276	0.74
278_W	282_T	1.273	0.74
162_I	166_L	1.270	0.73
21_D	30_E	1.269	0.73
74_R	112_D	1.261	0.73
147_L	151_R	1.256	0.73
307_S	311_D	1.254	0.73
221_D	549_K	1.254	0.73
464_R	553_V	1.246	0.72
252_P	258_I	1.243	0.72
132_K	216_L	1.240	0.72
500_Y	629_L	1.228	0.71
256_D	280_R	1.226	0.71
114_R	485_F	1.221	0.70
173_E	191_Q	1.220	0.70
526_E	560_A	1.217	0.70
587_I	624_V	1.216	0.70
372_E	622_P	1.215	0.70
273_E	286_S	1.215	0.70
413_G	455_M	1.214	0.70
131_A	549_K	1.213	0.70
421_R	459_M	1.213	0.70
369_A	524_P	1.210	0.70
405_L	413_G	1.207	0.70
82_S	85_E	1.204	0.69
271_H	289_F	1.200	0.69
285_P	288_S	1.198	0.69
49_I	136_M	1.195	0.69
77_G	186_R	1.192	0.69
271_H	287_K	1.182	0.68
274_E	278_W	1.175	0.67
108_M	112_D	1.170	0.67
311_D	317_L	1.169	0.67
133_R	137_Y	1.167	0.67
37_G	44_P	1.166	0.67
273_E	276_P	1.165	0.67
442_D	629_L	1.165	0.67
21_D	371_S	1.157	0.66
223_D	227_T	1.151	0.66
581_K	609_G	1.148	0.66
53_H	80_Y	1.145	0.65
258_I	264_S	1.144	0.65
592_S	614_F	1.140	0.65
310_G	313_G	1.136	0.65
439_S	581_K	1.129	0.64
280_R	288_S	1.118	0.64
258_I	284_A	1.116	0.63
255_S	259_T	1.115	0.63
275_M	282_T	1.110	0.63
78_T	212_L	1.108	0.63
230_F	307_S	1.107	0.63
109_L	619_D	1.107	0.63
587_I	609_G	1.106	0.63
56_K	59_A	1.105	0.63
295_E	298_A	1.105	0.63
308_R	313_G	1.102	0.62
277_T	286_S	1.102	0.62
535_R	571_D	1.098	0.62
223_D	226_N	1.097	0.62
446_T	483_V	1.096	0.62
392_K	472_A	1.094	0.62
275_M	285_P	1.094	0.62
345_P	349_G	1.090	0.62
279_H	282_T	1.090	0.62
279_H	302_L	1.089	0.61
288_S	292_F	1.085	0.61
624_V	627_P	1.085	0.61
530_D	572_T	1.083	0.61
272_E	275_M	1.080	0.61
300_S	306_A	1.080	0.61
274_E	284_A	1.080	0.61
277_T	284_A	1.078	0.61
397_K	555_S	1.077	0.61
80_Y	165_K	1.072	0.60
130_F	394_M	1.069	0.60
299_K	302_L	1.068	0.60
282_T	310_G	1.064	0.60
462_T	590_F	1.064	0.60
249_K	255_S	1.064	0.60
180_E	230_F	1.063	0.60
468_L	529_R	1.063	0.60
406_P	409_D	1.061	0.59
251_A	255_S	1.059	0.59
213_M	620_Q	1.059	0.59
286_S	292_F	1.059	0.59
214_D	291_Q	1.058	0.59
216_L	584_I	1.056	0.59
283_E	287_K	1.056	0.59
466_I	509_S	1.048	0.58
37_G	40_S	1.047	0.58
14_F	535_R	1.047	0.58
121_R	549_K	1.043	0.58
73_L	108_M	1.042	0.58
30_E	62_D	1.042	0.58
253_K	259_T	1.041	0.58
250_K	254_L	1.039	0.58
453_A	459_M	1.036	0.58
50_Y	53_H	1.036	0.58
178_M	240_A	1.036	0.58
413_G	416_N	1.031	0.57
29_S	78_T	1.027	0.57
238_K	264_S	1.026	0.57
261_P	269_D	1.019	0.56
189_I	212_L	1.016	0.56
195_R	265_D	1.013	0.56
395_I	443_A	1.010	0.56
37_G	53_H	1.009	0.56
152_S	178_M	1.009	0.56
457_D	608_Y	1.008	0.55
398_T	627_P	1.006	0.55
455_M	588_N	1.005	0.55
268_E	282_T	1.004	0.55
274_E	287_K	1.004	0.55
66_G	133_R	1.002	0.55
486_W	529_R	0.992	0.54
420_L	425_E	0.991	0.54
48_K	355_E	0.990	0.54
112_D	115_I	0.990	0.54
276_P	285_P	0.989	0.54
199_A	208_I	0.986	0.54
224_M	227_T	0.983	0.54
297_G	302_L	0.980	0.53
25_T	162_I	0.973	0.53
269_D	272_E	0.972	0.53
269_D	274_E	0.972	0.53
31_A	46_E	0.971	0.53
472_A	476_V	0.969	0.52
194_L	273_E	0.969	0.52
258_I	263_Q	0.968	0.52
280_R	312_D	0.967	0.52
197_Y	259_T	0.966	0.52
111_E	455_M	0.966	0.52
257_D	279_H	0.963	0.52
529_R	555_S	0.961	0.52
412_A	472_A	0.961	0.52
225_L	237_A	0.958	0.52
293_D	315_Q	0.957	0.52
451_C	504_V	0.956	0.51
413_G	418_K	0.955	0.51
463_K	550_F	0.953	0.51
393_Q	396_Q	0.952	0.51
40_S	53_H	0.952	0.51
269_D	366_P	0.950	0.51
499_N	532_Y	0.947	0.51
584_I	630_K	0.947	0.51
290_L	302_L	0.945	0.51
287_K	292_F	0.943	0.50
238_K	267_D	0.943	0.50
23_A	71_V	0.941	0.50
130_F	558_E	0.940	0.50
172_L	189_I	0.939	0.50
347_G	578_E	0.939	0.50
143_T	146_T	0.935	0.50
264_S	276_P	0.935	0.50
285_P	293_D	0.935	0.50
130_F	134_K	0.929	0.49
296_H	303_G	0.928	0.49
121_R	200_D	0.926	0.49
29_S	628_L	0.926	0.49
27_T	32_V	0.923	0.49
79_R	424_T	0.923	0.49
46_E	584_I	0.920	0.49
265_D	268_E	0.918	0.49
171_P	549_K	0.918	0.49
229_F	233_E	0.917	0.48
24_K	541_M	0.914	0.48
261_P	266_G	0.914	0.48
49_I	191_Q	0.913	0.48
273_E	278_W	0.912	0.48
176_P	268_E	0.911	0.48
96_H	110_L	0.909	0.48
564_Y	569_I	0.909	0.48
255_S	263_Q	0.908	0.48
274_E	282_T	0.905	0.48
133_R	138_R	0.905	0.48
283_E	292_F	0.903	0.47
274_E	286_S	0.901	0.47
81_S	112_D	0.901	0.47
455_M	478_V	0.900	0.47
263_Q	310_G	0.899	0.47
285_P	292_F	0.899	0.47
26_L	49_I	0.895	0.47
463_K	536_Q	0.895	0.47
281_E	288_S	0.894	0.47
237_A	281_E	0.892	0.47
23_A	96_H	0.892	0.47
409_D	412_A	0.892	0.47
571_D	622_P	0.891	0.47
267_D	288_S	0.891	0.47
415_L	481_Q	0.889	0.46
394_M	591_L	0.889	0.46
158_L	215_G	0.885	0.46
258_I	287_K	0.883	0.46
413_G	478_V	0.883	0.46
250_K	255_S	0.882	0.46
200_D	631_K	0.881	0.46
301_D	315_Q	0.880	0.46
144_Q	434_K	0.879	0.46
26_L	126_T	0.879	0.46
310_G	316_A	0.878	0.46
83_L	543_H	0.878	0.46
296_H	299_K	0.876	0.45
193_L	217_E	0.875	0.45
102_F	549_K	0.874	0.45
106_L	115_I	0.873	0.45
191_Q	235_D	0.873	0.45
407_R	414_R	0.871	0.45
294_I	297_G	0.870	0.45
208_I	211_D	0.866	0.45
304_K	311_D	0.865	0.45
483_V	537_M	0.862	0.44
260_L	269_D	0.861	0.44
278_W	293_D	0.860	0.44
31_A	48_K	0.859	0.44
395_I	548_Q	0.858	0.44
474_K	480_H	0.858	0.44
465_G	622_P	0.857	0.44
35_E	48_K	0.853	0.44
411_H	561_A	0.852	0.44
572_T	607_M	0.851	0.43
106_L	212_L	0.850	0.43
111_E	447_L	0.850	0.43
273_E	282_T	0.849	0.43
271_H	296_H	0.842	0.43
64_E	135_D	0.840	0.43
401_H	406_P	0.839	0.43
254_L	281_E	0.839	0.43
276_P	282_T	0.838	0.43
449_V	543_H	0.838	0.43
431_F	564_Y	0.837	0.42
506_P	509_S	0.837	0.42
260_L	363_Y	0.836	0.42
315_Q	318_G	0.835	0.42
415_L	544_R	0.834	0.42
477_A	482_I	0.832	0.42
305_D	308_R	0.831	0.42
409_D	632_L	0.831	0.42
251_A	261_P	0.831	0.42
209_V	587_I	0.831	0.42
254_L	266_G	0.831	0.42
194_L	582_R	0.829	0.42
627_P	630_K	0.825	0.42
389_K	414_R	0.824	0.41
271_H	288_S	0.823	0.41
272_E	279_H	0.823	0.41
252_P	256_D	0.822	0.41
277_T	283_E	0.822	0.41
257_D	266_G	0.822	0.41
264_S	282_T	0.816	0.41
13_S	17_M	0.816	0.41
112_D	116_E	0.814	0.41
306_A	309_E	0.814	0.41
85_E	161_A	0.814	0.41
272_E	285_P	0.814	0.41
548_Q	590_F	0.812	0.41
448_L	537_M	0.811	0.40
110_L	342_K	0.808	0.40
481_Q	588_N	0.807	0.40
440_E	475_S	0.807	0.40
443_A	561_A	0.806	0.40
163_Y	193_L	0.805	0.40
275_M	293_D	0.803	0.40
216_L	549_K	0.798	0.40
403_K	406_P	0.797	0.39
162_I	212_L	0.795	0.39
462_T	486_W	0.792	0.39
40_S	133_R	0.790	0.39
307_S	313_G	0.789	0.39
233_E	274_E	0.785	0.39
484_G	530_D	0.784	0.39
268_E	284_A	0.781	0.38
38_V	44_P	0.780	0.38
302_L	305_D	0.779	0.38
17_M	22_L	0.779	0.38
262_K	279_H	0.777	0.38
113_I	121_R	0.777	0.38
444_V	546_E	0.777	0.38
177_S	180_E	0.777	0.38
231_L	315_Q	0.775	0.38
273_E	315_Q	0.774	0.38
451_C	530_D	0.772	0.38
287_K	290_L	0.772	0.38
413_G	530_D	0.771	0.38
271_H	277_T	0.770	0.38
264_S	274_E	0.769	0.37
264_S	268_E	0.768	0.37
255_S	269_D	0.768	0.37
467_V	614_F	0.767	0.37
474_K	501_F	0.766	0.37
415_L	620_Q	0.765	0.37
288_S	295_E	0.765	0.37
273_E	288_S	0.765	0.37
272_E	288_S	0.764	0.37
312_D	316_A	0.763	0.37
375_L	622_P	0.758	0.37
127_K	169_E	0.758	0.37
270_I	282_T	0.757	0.37
457_D	589_V	0.756	0.37
263_Q	284_A	0.756	0.37
26_L	70_D	0.755	0.36
81_S	116_E	0.754	0.36
83_L	265_D	0.753	0.36
373_E	378_K	0.753	0.36
17_M	609_G	0.752	0.36
406_P	412_A	0.752	0.36
167_T	172_L	0.752	0.36
32_V	35_E	0.751	0.36
568_G	630_K	0.750	0.36
463_K	467_V	0.750	0.36
282_T	288_S	0.750	0.36
415_L	442_D	0.749	0.36
212_L	236_Y	0.748	0.36
528_N	544_R	0.748	0.36
130_F	181_D	0.747	0.36
265_D	287_K	0.744	0.36
309_E	314_D	0.743	0.36
19_L	28_K	0.743	0.36
283_E	308_R	0.742	0.36
275_M	278_W	0.741	0.35
32_V	97_L	0.740	0.35
239_A	258_I	0.740	0.35
303_G	306_A	0.738	0.35
185_M	362_I	0.737	0.35
97_L	428_P	0.736	0.35
21_D	28_K	0.734	0.35
159_F	162_I	0.734	0.35
260_L	267_D	0.733	0.35
48_K	62_D	0.732	0.35
275_M	283_E	0.731	0.35
429_R	432_Y	0.729	0.35
118_C	199_A	0.728	0.35
590_F	614_F	0.727	0.34
48_K	631_K	0.726	0.34
28_K	174_T	0.725	0.34
493_T	563_G	0.724	0.34
289_F	293_D	0.724	0.34
224_M	229_F	0.723	0.34
465_G	587_I	0.722	0.34
19_L	523_E	0.722	0.34
529_R	532_Y	0.721	0.34
462_T	466_I	0.721	0.34
101_S	549_K	0.721	0.34
538_T	542_L	0.720	0.34
392_K	475_S	0.718	0.34
236_Y	269_D	0.717	0.34
182_I	625_L	0.716	0.34
486_W	608_Y	0.716	0.34
276_P	283_E	0.711	0.33
262_K	276_P	0.710	0.33
419_L	532_Y	0.710	0.33
497_Q	500_Y	0.706	0.33
240_A	291_Q	0.706	0.33
586_V	614_F	0.705	0.33
15_L	64_E	0.705	0.33
254_L	279_H	0.705	0.33
115_I	194_L	0.703	0.33
149_L	165_K	0.703	0.33
227_T	354_K	0.703	0.33
184_L	216_L	0.700	0.33
251_A	254_L	0.698	0.33
269_D	515_S	0.698	0.33
529_R	561_A	0.698	0.33
412_A	529_R	0.696	0.32
229_F	234_L	0.695	0.32
34_V	51_M	0.694	0.32
227_T	277_T	0.694	0.32
529_R	607_M	0.694	0.32
256_D	270_I	0.693	0.32
124_P	535_R	0.692	0.32
409_D	621_L	0.692	0.32
280_R	292_F	0.690	0.32
75_S	576_V	0.690	0.32
102_F	587_I	0.689	0.32
215_G	620_Q	0.688	0.32
28_K	53_H	0.688	0.32
399_L	442_D	0.688	0.32
481_Q	537_M	0.688	0.32
590_F	604_I	0.685	0.32
532_Y	571_D	0.685	0.32
21_D	70_D	0.685	0.32
494_E	527_D	0.684	0.32
156_D	424_T	0.684	0.32
415_L	419_L	0.683	0.32
158_L	189_I	0.683	0.32
69_S	130_F	0.683	0.32
473_L	576_V	0.682	0.31
266_G	281_E	0.681	0.31
164_F	172_L	0.680	0.31
529_R	535_R	0.680	0.31
188_F	281_E	0.679	0.31
232_P	236_Y	0.679	0.31
505_I	536_Q	0.679	0.31
458_K	470_H	0.678	0.31
484_G	522_L	0.677	0.31
84_H	209_V	0.677	0.31
68_K	129_V	0.677	0.31
288_S	293_D	0.676	0.31
88_N	96_H	0.676	0.31
470_H	480_H	0.675	0.31
402_K	619_D	0.674	0.31
476_V	560_A	0.673	0.31
267_D	283_E	0.672	0.31
262_K	265_D	0.672	0.31
26_L	106_L	0.672	0.31
106_L	145_L	0.671	0.31
313_G	320_V	0.670	0.31
505_I	508_Q	0.670	0.31
274_E	288_S	0.669	0.31
233_E	288_S	0.669	0.31
225_L	231_L	0.668	0.31
44_P	49_I	0.666	0.30
397_K	550_F	0.664	0.30
19_L	142_S	0.663	0.30
425_E	624_V	0.663	0.30
139_K	267_D	0.662	0.30
273_E	280_R	0.662	0.30
114_R	118_C	0.661	0.30
32_V	70_D	0.661	0.30
279_H	283_E	0.660	0.30
50_Y	210_E	0.658	0.30
291_Q	300_S	0.658	0.30
455_M	590_F	0.658	0.30
13_S	16_F	0.655	0.30
24_K	120_K	0.655	0.30
419_L	629_L	0.654	0.30
14_F	587_I	0.654	0.30
340_S	343_D	0.653	0.30
276_P	289_F	0.653	0.30
206_L	210_E	0.653	0.30
507_F	614_F	0.651	0.29
260_L	263_Q	0.651	0.29
604_I	614_F	0.650	0.29
272_E	278_W	0.650	0.29
270_I	285_P	0.648	0.29
189_I	402_K	0.648	0.29
233_E	252_P	0.648	0.29
455_M	458_K	0.647	0.29
433_K	608_Y	0.647	0.29
79_R	425_E	0.647	0.29
261_P	281_E	0.646	0.29
281_E	292_F	0.646	0.29
32_V	51_M	0.642	0.29
309_E	315_Q	0.641	0.29
18_M	22_L	0.640	0.29
349_G	628_L	0.640	0.29
263_Q	286_S	0.640	0.29
378_K	397_K	0.637	0.29
291_Q	296_H	0.636	0.28
258_I	357_K	0.634	0.28
81_S	108_M	0.634	0.28
589_V	614_F	0.633	0.28
21_D	47_K	0.633	0.28
216_L	538_T	0.633	0.28
73_L	427_N	0.632	0.28
285_P	289_F	0.631	0.28
27_T	466_I	0.631	0.28
345_P	350_M	0.630	0.28
265_D	269_D	0.629	0.28
51_M	318_G	0.629	0.28
413_G	528_N	0.627	0.28
26_L	71_V	0.627	0.28
546_E	629_L	0.627	0.28
158_L	566_Q	0.626	0.28
471_E	504_V	0.625	0.28
121_R	315_Q	0.625	0.28
260_L	283_E	0.625	0.28
156_D	410_L	0.623	0.28
228_Y	231_L	0.623	0.28
544_R	629_L	0.623	0.28
21_D	26_L	0.623	0.28
391_L	585_E	0.622	0.28
186_R	405_L	0.621	0.28
271_H	283_E	0.621	0.28
264_S	271_H	0.621	0.28
122_E	371_S	0.621	0.28
157_A	163_Y	0.620	0.28
263_Q	298_A	0.620	0.28
588_N	603_T	0.620	0.28
534_I	572_T	0.619	0.27
396_Q	632_L	0.619	0.27
204_Q	207_K	0.617	0.27
258_I	272_E	0.617	0.27
155_T	159_F	0.617	0.27
566_Q	626_Y	0.617	0.27
42_Y	124_P	0.615	0.27
31_A	362_I	0.614	0.27
141_F	156_D	0.612	0.27
559_P	621_L	0.611	0.27
530_D	544_R	0.611	0.27
19_L	380_Q	0.610	0.27
467_V	486_W	0.610	0.27
195_R	200_D	0.609	0.27
527_D	530_D	0.609	0.27
30_E	35_E	0.609	0.27
280_R	285_P	0.608	0.27
82_S	582_R	0.608	0.27
273_E	284_A	0.607	0.27
30_E	209_V	0.606	0.27
400_E	405_L	0.606	0.27
277_T	289_F	0.606	0.27
588_N	615_V	0.604	0.27
354_K	622_P	0.603	0.26
135_D	355_E	0.601	0.26
66_G	626_Y	0.601	0.26
484_G	516_G	0.601	0.26
259_T	302_L	0.600	0.26
483_V	548_Q	0.599	0.26
234_L	238_K	0.599	0.26
20_T	102_F	0.598	0.26
259_T	279_H	0.596	0.26
48_K	101_S	0.596	0.26
84_H	203_R	0.595	0.26
101_S	199_A	0.595	0.26
270_I	292_F	0.595	0.26
70_D	73_L	0.594	0.26
270_I	289_F	0.594	0.26
139_K	264_S	0.594	0.26
264_S	270_I	0.594	0.26
271_H	279_H	0.594	0.26
124_P	549_K	0.593	0.26
99_F	173_E	0.593	0.26
371_S	375_L	0.593	0.26
590_F	621_L	0.591	0.26
60_A	140_H	0.591	0.26
384_I	398_T	0.590	0.26
48_K	100_K	0.590	0.26
268_E	280_R	0.587	0.26
273_E	277_T	0.587	0.26
170_S	178_M	0.586	0.25
453_A	530_D	0.583	0.25
508_Q	544_R	0.582	0.25
204_Q	263_Q	0.580	0.25
292_F	296_H	0.580	0.25
259_T	317_L	0.580	0.25
556_D	559_P	0.580	0.25
88_N	184_L	0.579	0.25
186_R	198_E	0.578	0.25
176_P	353_G	0.577	0.25
535_R	628_L	0.575	0.25
443_A	498_P	0.575	0.25
20_T	88_N	0.574	0.25
410_L	449_V	0.574	0.25
186_R	224_M	0.574	0.25
99_F	314_D	0.573	0.25
112_D	609_G	0.573	0.25
397_K	528_N	0.572	0.25
360_F	433_K	0.572	0.25
85_E	88_N	0.570	0.25
264_S	277_T	0.570	0.25
414_R	535_R	0.569	0.25
147_L	587_I	0.568	0.24
360_F	496_S	0.567	0.24
555_S	572_T	0.565	0.24
105_Q	137_Y	0.564	0.24
202_T	546_E	0.564	0.24
212_L	235_D	0.562	0.24
300_S	309_E	0.562	0.24
124_P	414_R	0.559	0.24
276_P	284_A	0.559	0.24
77_G	116_E	0.558	0.24
560_A	576_V	0.558	0.24
283_E	289_F	0.556	0.24
40_S	63_M	0.555	0.24
261_P	302_L	0.555	0.24
267_D	279_H	0.555	0.24
238_K	282_T	0.555	0.24
39_Q	627_P	0.555	0.24
255_S	276_P	0.553	0.24
115_I	149_L	0.553	0.24
235_D	265_D	0.553	0.24
141_F	620_Q	0.552	0.24
405_L	412_A	0.552	0.24
459_M	554_F	0.551	0.24
373_E	430_L	0.551	0.24
532_Y	590_F	0.551	0.24
131_A	174_T	0.551	0.24
215_G	220_L	0.551	0.24
453_A	591_L	0.550	0.23
185_M	449_V	0.550	0.23
227_T	252_P	0.550	0.23
278_W	285_P	0.549	0.23
292_F	311_D	0.548	0.23
392_K	592_S	0.548	0.23
591_L	628_L	0.547	0.23
486_W	571_D	0.546	0.23
270_I	313_G	0.546	0.23
123_R	519_I	0.545	0.23
29_S	36_Y	0.545	0.23
73_L	430_L	0.544	0.23
292_F	315_Q	0.544	0.23
483_V	568_G	0.543	0.23
530_D	629_L	0.542	0.23
270_I	294_I	0.541	0.23
200_D	209_V	0.541	0.23
234_L	266_G	0.540	0.23
279_H	293_D	0.539	0.23
19_L	312_D	0.539	0.23
534_I	551_L	0.538	0.23
224_M	233_E	0.537	0.23
384_I	534_I	0.537	0.23
184_L	543_H	0.536	0.23
32_V	436_E	0.536	0.23
13_S	625_L	0.536	0.23
286_S	290_L	0.536	0.23
481_Q	532_Y	0.536	0.23
77_G	88_N	0.535	0.23
268_E	274_E	0.535	0.23
523_E	626_Y	0.534	0.23
269_D	281_E	0.534	0.23
143_T	174_T	0.534	0.23
204_Q	212_L	0.534	0.23
43_N	582_R	0.533	0.23
208_I	216_L	0.533	0.23
255_S	283_E	0.533	0.23
529_R	572_T	0.533	0.23
46_E	62_D	0.533	0.23
125_G	546_E	0.532	0.22
271_H	284_A	0.530	0.22
144_Q	174_T	0.530	0.22
276_P	310_G	0.530	0.22
413_G	453_A	0.530	0.22
17_M	29_S	0.529	0.22
277_T	292_F	0.528	0.22
385_E	447_L	0.524	0.22
379_Q	383_T	0.524	0.22
250_K	253_K	0.524	0.22
484_G	500_Y	0.523	0.22
232_P	251_A	0.523	0.22
477_A	583_G	0.523	0.22
269_D	289_F	0.522	0.22
22_L	539_K	0.522	0.22
486_W	555_S	0.522	0.22
250_K	259_T	0.521	0.22
571_D	607_M	0.520	0.22
192_Q	199_A	0.518	0.22
507_F	571_D	0.518	0.22
147_L	176_P	0.518	0.22
199_A	205_V	0.517	0.22
568_G	576_V	0.516	0.22
381_A	561_A	0.516	0.22
401_H	419_L	0.516	0.22
507_F	531_G	0.516	0.22
285_P	290_L	0.514	0.22
568_G	604_I	0.514	0.22
24_K	30_E	0.514	0.22
467_V	500_Y	0.514	0.22
74_R	587_I	0.514	0.22
70_D	208_I	0.514	0.22
293_D	299_K	0.513	0.21
249_K	254_L	0.513	0.21
188_F	212_L	0.512	0.21
20_T	32_V	0.512	0.21
178_M	208_I	0.512	0.21
113_I	162_I	0.512	0.21
155_T	574_E	0.511	0.21
554_F	588_N	0.511	0.21
268_E	291_Q	0.510	0.21
173_E	254_L	0.510	0.21
110_L	192_Q	0.510	0.21
17_M	67_L	0.510	0.21
544_R	606_D	0.509	0.21
113_I	441_I	0.509	0.21
191_Q	194_L	0.509	0.21
282_T	286_S	0.509	0.21
72_Y	397_K	0.508	0.21
69_S	590_F	0.508	0.21
255_S	267_D	0.507	0.21
163_Y	168_A	0.506	0.21
410_L	555_S	0.505	0.21
380_Q	626_Y	0.505	0.21
13_S	405_L	0.505	0.21
32_V	37_G	0.505	0.21
221_D	266_G	0.504	0.21
117_E	199_A	0.504	0.21
189_I	625_L	0.503	0.21
268_E	271_H	0.503	0.21
287_K	293_D	0.502	0.21
377_Y	384_I	0.502	0.21
263_Q	292_F	0.502	0.21
292_F	295_E	0.501	0.21
278_W	284_A	0.501	0.21
453_A	501_F	0.501	0.21
143_T	584_I	0.501	0.21
355_E	589_V	0.500	0.21

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4okuA	2	0.2759	99.8	0.842	Contact Map
4okrA	1	0.2696	99.8	0.843	Contact Map
1q0pA	1	0.2524	99.8	0.845	Contact Map
1n3yA	1	0.279	99.8	0.845	Contact Map
1mf7A	1	0.2868	99.8	0.845	Contact Map
4jduA	1	0.2618	99.8	0.846	Contact Map
2x31A	2	0.279	99.8	0.846	Contact Map
4fx5A	1	0.3448	99.8	0.846	Contact Map
1ijbA	1	0.2962	99.8	0.848	Contact Map
4bj3A	1	0.2586	99.8	0.849	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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