YNGE - BACSU - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

YNGE - Uncharacterized carboxylase YngE

UniProt:	O31825	Sequences: MLMDYEKERTERAERIRKGGAEKYHQSNREKGKLFVRERLSLLFDDDIELEDAFFAECMSDGLPADGVVTAIGKIGGQTVCVMANDSTVKAGSWGAKTVEKIIRIQEIAEKLNCPLIYLVDSAGARITDQINVFPGRRGAGRIFYNQVKLSGRIPQICLLFGPSAAGGAYIPAFCDIVVMVDGNASMYLGSPRMAEMVIGEKVSLEEMGGARMHCSISGCGDILAETEEEAIQLVRAYLSYFPANFQEKAPIHEKRPPKHFETPLADVIPQNQNAPFDMHELIERVIDEDSFFEIKALFAPELLTGLARIHGQPVGIVANQPKVKGGVLFHDSADKAAKFITLCDAFHIPLLFLADIPGFMIGTKVEQAGIIRHGAKMISAMSEATVPKLSVIVRKAYGAGLYAMAGPAFEPDCCLALPTAQIAVMGPEAAVNAVYAKKIAELPEEERAAFISSKREEYKEDINIYRLASEMIIDAVIPANSLRDELAKRLKAYMTKEMTFTNRKHPVYPV	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	511 (485)
Sequences:	5213 (2295)
Seq/√Len:	104.2

BACSU - YNGE PCCB
HALSA - Q9HRN1 Q9HPQ0
SULSO - Q97VY8

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
287_I	308_A	4.722	1.00
292_F	306_G	4.637	1.00
279_M	304_L	4.594	1.00
204_S	207_E	4.186	1.00
303_L	337_A	4.127	1.00
182_D	226_E	4.079	1.00
44_F	73_G	4.031	1.00
22_E	26_Q	3.829	1.00
44_F	82_V	3.678	1.00
159_L	235_V	3.548	1.00
286_V	354_L	3.310	1.00
196_E	202_K	3.219	1.00
48_I	74_K	3.211	1.00
310_I	487_L	2.861	1.00
266_A	481_N	2.842	1.00
352_L	491_L	2.840	1.00
107_E	146_N	2.820	1.00
316_G	344_C	2.808	1.00
451_F	454_S	2.743	1.00
453_S	457_E	2.677	1.00
355_A	391_S	2.610	1.00
392_V	483_L	2.594	1.00
26_Q	30_E	2.589	1.00
279_M	394_V	2.558	1.00
49_E	71_A	2.524	1.00
179_V	235_V	2.456	1.00
266_A	479_P	2.397	1.00
257_P	261_F	2.362	1.00
223_I	295_I	2.322	1.00
308_A	317_I	2.256	1.00
227_T	230_E	2.256	1.00
215_C	298_L	2.245	1.00
81_C	105_I	2.197	1.00
311_H	488_A	2.150	1.00
335_D	374_H	2.145	1.00
418_L	483_L	2.135	1.00
158_C	175_C	2.130	1.00
287_I	317_I	2.085	1.00
225_A	234_L	2.085	1.00
215_C	221_G	2.059	1.00
36_V	69_V	2.052	1.00
482_S	485_D	2.016	1.00
211_A	224_L	2.014	1.00
457_E	461_E	2.008	1.00
458_E	462_D	2.007	1.00
8_E	12_R	1.998	1.00
179_V	231_A	1.995	1.00
58_C	63_L	1.985	1.00
81_C	114_C	1.978	1.00
226_E	230_E	1.973	1.00
203_V	364_T	1.972	1.00
29_R	38_E	1.967	1.00
315_V	352_L	1.965	1.00
352_L	487_L	1.958	1.00
25_H	29_R	1.951	1.00
58_C	62_G	1.925	1.00
390_L	491_L	1.914	1.00
110_E	150_L	1.895	1.00
262_E	285_R	1.886	1.00
182_D	212_R	1.881	1.00
34_L	42_L	1.875	1.00
59_M	63_L	1.872	1.00
212_R	216_S	1.839	1.00
42_L	229_E	1.813	1.00
256_R	291_S	1.813	1.00
310_I	488_A	1.812	1.00
311_H	492_K	1.811	1.00
313_Q	495_M	1.794	1.00
282_L	394_V	1.788	1.00
354_L	392_V	1.786	1.00
53_A	104_R	1.773	1.00
40_L	44_F	1.766	1.00
215_C	224_L	1.755	1.00
230_E	234_L	1.733	1.00
180_M	185_A	1.733	1.00
417_A	421_A	1.732	1.00
283_I	287_I	1.689	1.00
213_M	368_Q	1.680	1.00
36_V	84_A	1.669	1.00
40_L	82_V	1.668	1.00
241_Y	291_S	1.665	1.00
345_D	386_T	1.664	1.00
337_A	378_M	1.655	1.00
179_V	234_L	1.650	1.00
57_E	63_L	1.639	1.00
13_A	476_A	1.634	1.00
217_I	368_Q	1.633	1.00
76_G	240_S	1.633	1.00
79_T	114_C	1.623	1.00
68_V	102_I	1.615	1.00
10_T	479_P	1.590	1.00
259_K	289_E	1.580	1.00
161_F	228_E	1.574	1.00
222_D	296_K	1.572	1.00
13_A	54_F	1.562	1.00
78_Q	243_P	1.560	1.00
449_A	453_S	1.559	1.00
8_E	11_E	1.546	1.00
43_L	75_I	1.545	1.00
83_M	118_Y	1.545	1.00
106_Q	116_L	1.541	1.00
119_L	159_L	1.540	1.00
283_I	354_L	1.539	1.00
179_V	238_Y	1.526	1.00
44_F	48_I	1.498	1.00
42_L	233_Q	1.498	1.00
57_E	61_D	1.495	1.00
476_A	486_E	1.483	1.00
451_F	455_K	1.482	1.00
66_D	97_K	1.481	1.00
18_K	22_E	1.472	1.00
58_C	61_D	1.470	1.00
59_M	62_G	1.466	1.00
280_H	294_E	1.461	1.00
392_V	487_L	1.457	1.00
443_L	451_F	1.456	1.00
179_V	225_A	1.448	1.00
182_D	224_L	1.444	1.00
390_L	487_L	1.442	1.00
237_A	291_S	1.429	1.00
433_N	452_I	1.412	1.00
9_R	466_Y	1.407	1.00
126_R	129_D	1.398	1.00
364_T	368_Q	1.396	1.00
450_A	454_S	1.387	1.00
299_F	332_D	1.371	1.00
445_E	450_A	1.367	1.00
283_I	317_I	1.366	1.00
416_L	486_E	1.364	1.00
341_I	385_A	1.361	1.00
414_C	490_R	1.360	1.00
17_R	54_F	1.359	0.99
56_A	97_K	1.355	0.99
42_L	232_I	1.342	0.99
352_L	390_L	1.329	0.99
14_E	17_R	1.312	0.99
342_T	384_E	1.299	0.99
428_P	460_K	1.299	0.99
27_S	30_E	1.294	0.99
70_T	105_I	1.293	0.99
60_S	63_L	1.286	0.99
264_P	285_R	1.286	0.99
10_T	13_A	1.284	0.99
161_F	232_I	1.278	0.99
132_N	471_E	1.274	0.99
437_A	440_I	1.266	0.99
317_I	352_L	1.263	0.99
345_D	385_A	1.259	0.99
74_K	79_T	1.259	0.99
225_A	230_E	1.258	0.99
57_E	62_G	1.257	0.99
278_D	281_E	1.255	0.99
287_I	310_I	1.250	0.99
54_F	476_A	1.249	0.99
12_R	466_Y	1.240	0.99
106_Q	146_N	1.233	0.99
119_L	161_F	1.226	0.99
12_R	15_R	1.222	0.99
8_E	464_N	1.220	0.99
479_P	482_S	1.218	0.99
231_A	235_V	1.216	0.99
119_L	232_I	1.214	0.99
110_E	149_K	1.213	0.99
283_I	306_G	1.210	0.99
25_H	35_F	1.208	0.99
207_E	364_T	1.207	0.99
188_Y	205_L	1.206	0.99
21_A	25_H	1.205	0.99
440_I	443_L	1.203	0.99
57_E	60_S	1.195	0.99
390_L	490_R	1.194	0.99
225_A	231_A	1.191	0.99
234_L	237_A	1.188	0.99
314_P	349_I	1.186	0.99
93_S	123_A	1.185	0.99
18_K	25_H	1.183	0.99
397_A	402_L	1.181	0.99
390_L	494_Y	1.179	0.99
256_R	289_E	1.173	0.99
296_K	305_T	1.169	0.98
431_A	459_Y	1.167	0.98
78_Q	244_A	1.166	0.98
438_K	442_E	1.161	0.98
147_Q	171_I	1.158	0.98
16_I	55_F	1.157	0.98
331_H	369_A	1.149	0.98
150_L	154_I	1.144	0.98
234_L	293_F	1.144	0.98
443_L	446_E	1.140	0.98
353_F	382_M	1.135	0.98
223_I	234_L	1.134	0.98
23_K	26_Q	1.133	0.98
102_I	143_I	1.121	0.98
223_I	297_A	1.119	0.98
22_E	25_H	1.118	0.98
263_T	266_A	1.115	0.98
398_Y	422_Q	1.110	0.98
177_I	223_I	1.108	0.98
111_K	413_D	1.108	0.98
72_I	81_C	1.106	0.98
20_G	88_T	1.096	0.98
280_H	304_L	1.095	0.98
13_A	17_R	1.092	0.98
230_E	233_Q	1.089	0.98
452_I	456_R	1.086	0.98
13_A	482_S	1.084	0.98
437_A	441_A	1.080	0.97
11_E	15_R	1.078	0.97
315_V	491_L	1.077	0.97
66_D	126_R	1.076	0.97
74_K	492_K	1.076	0.97
157_I	235_V	1.075	0.97
429_E	456_R	1.071	0.97
81_C	112_L	1.069	0.97
341_I	351_L	1.068	0.97
283_I	292_F	1.068	0.97
29_R	35_F	1.062	0.97
141_G	403_Y	1.062	0.97
416_L	490_R	1.049	0.97
138_R	409_A	1.046	0.97
480_A	483_L	1.044	0.97
44_F	80_V	1.042	0.97
427_G	430_A	1.041	0.97
320_N	405_M	1.039	0.97
35_F	38_E	1.037	0.97
216_S	298_L	1.034	0.97
142_R	409_A	1.032	0.97
18_K	21_A	1.031	0.97
360_F	404_A	1.027	0.97
457_E	460_K	1.026	0.97
40_L	84_A	1.026	0.97
432_V	455_K	1.025	0.96
422_Q	460_K	1.020	0.96
37_R	51_E	1.017	0.96
455_K	458_E	1.015	0.96
281_E	284_E	1.008	0.96
423_I	468_L	1.006	0.96
145_Y	149_K	1.003	0.96
212_R	298_L	1.002	0.96
99_V	139_G	1.000	0.96
16_I	65_A	1.000	0.96
445_E	449_A	0.994	0.96
11_E	14_E	0.993	0.96
429_E	460_K	0.992	0.96
34_L	228_E	0.990	0.96
161_F	184_N	0.990	0.96
228_E	232_I	0.987	0.96
159_L	179_V	0.986	0.96
264_P	267_D	0.986	0.96
193_R	437_A	0.985	0.96
255_K	311_H	0.984	0.96
100_E	142_R	0.979	0.95
277_F	322_P	0.977	0.95
147_Q	156_Q	0.972	0.95
50_L	489_K	0.970	0.95
108_I	112_L	0.963	0.95
237_A	293_F	0.961	0.95
224_L	298_L	0.955	0.95
201_E	364_T	0.954	0.95
294_E	297_A	0.953	0.95
87_S	163_P	0.953	0.95
308_A	315_V	0.945	0.94
247_Q	498_E	0.944	0.94
103_I	146_N	0.941	0.94
53_A	70_T	0.939	0.94
365_K	368_Q	0.939	0.94
478_I	483_L	0.938	0.94
440_I	446_E	0.937	0.94
416_L	476_A	0.936	0.94
96_A	132_N	0.929	0.94
79_T	493_A	0.928	0.94
177_I	238_Y	0.927	0.94
72_I	79_T	0.926	0.94
28_N	33_K	0.924	0.94
440_I	455_K	0.924	0.94
95_G	126_R	0.921	0.94
73_G	82_V	0.921	0.94
408_P	475_D	0.919	0.94
310_I	392_V	0.918	0.94
263_T	481_N	0.918	0.94
382_M	406_A	0.917	0.94
76_G	244_A	0.914	0.93
438_K	441_A	0.914	0.93
223_I	293_F	0.911	0.93
352_L	392_V	0.908	0.93
161_F	181_V	0.905	0.93
454_S	458_E	0.905	0.93
112_L	413_D	0.904	0.93
313_Q	492_K	0.904	0.93
79_T	492_K	0.903	0.93
72_I	114_C	0.902	0.93
301_P	324_V	0.901	0.93
396_K	422_Q	0.899	0.93
389_K	406_A	0.897	0.93
303_L	329_L	0.897	0.93
40_L	69_V	0.896	0.93
21_A	24_Y	0.892	0.93
255_K	261_F	0.889	0.92
38_E	41_S	0.888	0.92
287_I	352_L	0.887	0.92
28_N	87_S	0.886	0.92
170_Y	375_G	0.883	0.92
351_L	406_A	0.880	0.92
338_A	381_A	0.879	0.92
351_L	389_K	0.878	0.92
331_H	374_H	0.877	0.92
281_E	285_R	0.876	0.92
459_Y	463_I	0.874	0.92
27_S	31_K	0.874	0.92
365_K	369_A	0.869	0.92
122_S	168_G	0.868	0.92
337_A	341_I	0.868	0.92
51_E	101_K	0.867	0.92
354_L	394_V	0.863	0.91
203_V	207_E	0.860	0.91
343_L	347_F	0.857	0.91
50_L	72_I	0.854	0.91
403_Y	409_A	0.854	0.91
107_E	111_K	0.852	0.91
367_E	370_G	0.850	0.91
14_E	18_K	0.850	0.91
13_A	55_F	0.847	0.91
465_I	468_L	0.846	0.91
439_K	442_E	0.842	0.90
212_R	224_L	0.842	0.90
417_A	468_L	0.838	0.90
318_V	341_I	0.838	0.90
151_S	346_A	0.836	0.90
169_A	372_I	0.835	0.90
148_V	174_F	0.835	0.90
244_A	248_E	0.834	0.90
418_L	480_A	0.833	0.90
17_R	41_S	0.829	0.90
252_I	313_Q	0.828	0.90
229_E	233_Q	0.827	0.89
85_N	98_T	0.825	0.89
72_I	112_L	0.824	0.89
268_V	285_R	0.824	0.89
43_L	117_I	0.823	0.89
75_I	80_V	0.818	0.89
9_R	13_A	0.818	0.89
52_D	108_I	0.814	0.89
440_I	451_F	0.812	0.89
272_N	275_A	0.811	0.89
177_I	343_L	0.810	0.89
259_K	262_E	0.810	0.89
117_I	239_L	0.808	0.88
424_A	463_I	0.806	0.88
342_T	381_A	0.801	0.88
412_P	415_C	0.800	0.88
130_Q	134_F	0.799	0.88
141_G	409_A	0.799	0.88
52_D	70_T	0.798	0.88
46_D	255_K	0.798	0.88
64_P	89_V	0.797	0.88
295_I	305_T	0.797	0.88
203_V	368_Q	0.795	0.88
159_L	231_A	0.795	0.88
145_Y	383_S	0.795	0.88
153_R	246_F	0.792	0.87
52_D	105_I	0.790	0.87
450_A	453_S	0.790	0.87
432_V	440_I	0.787	0.87
103_I	107_E	0.784	0.87
159_L	232_I	0.783	0.87
56_A	472_M	0.783	0.87
110_E	154_I	0.781	0.87
142_R	411_E	0.781	0.87
369_A	374_H	0.781	0.87
91_A	123_A	0.781	0.87
258_P	261_F	0.780	0.87
123_A	434_A	0.779	0.87
414_C	493_A	0.779	0.87
58_C	97_K	0.778	0.86
95_G	98_T	0.775	0.86
79_T	112_L	0.774	0.86
231_A	234_L	0.774	0.86
391_S	415_C	0.772	0.86
113_N	245_N	0.770	0.86
260_H	284_E	0.770	0.86
308_A	352_L	0.769	0.86
214_H	218_S	0.769	0.86
305_T	340_F	0.768	0.86
83_M	116_L	0.765	0.86
294_E	336_K	0.764	0.85
249_K	313_Q	0.764	0.85
94_W	102_I	0.763	0.85
310_I	315_V	0.759	0.85
482_S	486_E	0.757	0.85
148_V	383_S	0.756	0.85
33_K	184_N	0.755	0.85
179_V	223_I	0.754	0.85
383_S	410_F	0.753	0.85
353_F	389_K	0.749	0.84
302_E	330_F	0.746	0.84
393_I	421_A	0.746	0.84
335_D	373_R	0.746	0.84
144_F	167_G	0.745	0.84
436_Y	452_I	0.744	0.84
307_L	343_L	0.743	0.84
98_T	102_I	0.743	0.84
265_L	282_L	0.742	0.84
243_P	246_F	0.742	0.84
241_Y	314_P	0.742	0.84
81_C	108_I	0.741	0.84
253_H	309_R	0.741	0.84
429_E	433_N	0.739	0.83
311_H	485_D	0.738	0.83
292_F	304_L	0.736	0.83
117_I	235_V	0.736	0.83
67_G	98_T	0.735	0.83
28_N	35_F	0.735	0.83
486_E	489_K	0.734	0.83
264_P	282_L	0.734	0.83
25_H	28_N	0.734	0.83
462_D	467_R	0.733	0.83
79_T	496_T	0.732	0.83
41_S	46_D	0.732	0.83
16_I	469_A	0.731	0.83
213_M	217_I	0.729	0.83
15_R	18_K	0.729	0.83
48_I	71_A	0.728	0.83
375_G	425_V	0.728	0.83
97_K	100_E	0.725	0.82
80_V	117_I	0.723	0.82
117_I	157_I	0.722	0.82
8_E	466_Y	0.721	0.82
142_R	146_N	0.720	0.82
393_I	415_C	0.720	0.82
187_M	372_I	0.719	0.82
76_G	236_R	0.717	0.82
23_K	27_S	0.714	0.81
241_Y	293_F	0.707	0.81
393_I	417_A	0.705	0.81
10_T	14_E	0.702	0.80
131_I	462_D	0.702	0.80
29_R	36_V	0.702	0.80
351_L	382_M	0.702	0.80
467_R	470_S	0.701	0.80
257_P	485_D	0.700	0.80
108_I	111_K	0.697	0.80
351_L	385_A	0.696	0.80
96_A	471_E	0.695	0.80
106_Q	150_L	0.691	0.79
408_P	415_C	0.691	0.79
157_I	238_Y	0.689	0.79
75_I	232_I	0.688	0.79
429_E	452_I	0.686	0.79
375_G	427_G	0.686	0.79
44_F	74_K	0.685	0.79
409_A	473_I	0.685	0.79
284_E	291_S	0.684	0.79
357_I	371_I	0.683	0.78
184_N	228_E	0.681	0.78
78_Q	251_P	0.681	0.78
492_K	495_M	0.679	0.78
232_I	236_R	0.679	0.78
28_N	31_K	0.679	0.78
245_N	348_H	0.678	0.78
34_L	229_E	0.678	0.78
303_L	318_V	0.676	0.78
28_N	88_T	0.676	0.78
251_P	309_R	0.675	0.78
240_S	309_R	0.675	0.78
341_I	382_M	0.674	0.77
81_C	493_A	0.673	0.77
167_G	191_S	0.673	0.77
298_L	301_P	0.673	0.77
269_I	273_Q	0.672	0.77
262_E	485_D	0.672	0.77
239_L	314_P	0.671	0.77
467_R	471_E	0.670	0.77
393_I	423_I	0.668	0.77
179_V	293_F	0.668	0.77
329_L	334_A	0.668	0.77
197_M	433_N	0.668	0.77
257_P	260_H	0.668	0.77
75_I	239_L	0.668	0.77
72_I	493_A	0.667	0.77
145_Y	411_E	0.667	0.77
440_I	445_E	0.666	0.77
44_F	75_I	0.665	0.77
138_R	142_R	0.664	0.76
13_A	16_I	0.664	0.76
103_I	142_R	0.663	0.76
252_I	311_H	0.659	0.76
244_A	251_P	0.659	0.76
15_R	60_S	0.656	0.76
116_L	154_I	0.654	0.75
18_K	26_Q	0.654	0.75
26_Q	29_R	0.652	0.75
262_E	265_L	0.650	0.75
355_A	406_A	0.649	0.75
78_Q	113_N	0.648	0.75
45_D	48_I	0.648	0.75
485_D	489_K	0.647	0.75
486_E	490_R	0.646	0.74
180_M	221_G	0.645	0.74
253_H	256_R	0.643	0.74
299_F	335_D	0.642	0.74
260_H	290_D	0.641	0.74
170_Y	425_V	0.639	0.74
273_Q	422_Q	0.637	0.73
272_N	276_P	0.637	0.73
55_F	469_A	0.637	0.73
80_V	243_P	0.633	0.73
15_R	62_G	0.632	0.73
284_E	290_D	0.630	0.73
82_V	117_I	0.629	0.73
12_R	464_N	0.627	0.72
494_Y	497_K	0.627	0.72
20_G	24_Y	0.626	0.72
371_I	375_G	0.624	0.72
269_I	282_L	0.624	0.72
249_K	498_E	0.623	0.72
91_A	119_L	0.623	0.72
121_D	164_S	0.622	0.72
44_F	117_I	0.621	0.72
218_S	370_G	0.620	0.71
452_I	455_K	0.620	0.71
318_V	345_D	0.620	0.71
234_L	238_Y	0.619	0.71
302_E	333_S	0.616	0.71
107_E	411_E	0.615	0.71
339_K	373_R	0.614	0.71
310_I	390_L	0.611	0.70
16_I	54_F	0.611	0.70
174_F	380_S	0.611	0.70
338_A	341_I	0.611	0.70
43_L	82_V	0.611	0.70
114_C	493_A	0.610	0.70
406_A	412_P	0.610	0.70
235_V	238_Y	0.609	0.70
260_H	285_R	0.609	0.70
258_P	290_D	0.608	0.70
94_W	140_A	0.607	0.70
33_K	87_S	0.606	0.70
91_A	434_A	0.606	0.70
93_S	126_R	0.606	0.70
404_A	415_C	0.605	0.70
257_P	311_H	0.604	0.69
261_F	310_I	0.603	0.69
237_A	240_S	0.603	0.69
181_V	231_A	0.602	0.69
52_D	81_C	0.601	0.69
149_K	386_T	0.601	0.69
67_G	126_R	0.599	0.69
103_I	106_Q	0.599	0.69
352_L	494_Y	0.598	0.69
216_S	274_N	0.598	0.69
123_A	191_S	0.597	0.69
390_L	416_L	0.597	0.69
374_H	377_K	0.597	0.69
436_Y	455_K	0.596	0.68
12_R	16_I	0.594	0.68
69_V	84_A	0.594	0.68
259_K	291_S	0.592	0.68
309_R	314_P	0.592	0.68
158_C	172_P	0.592	0.68
341_I	381_A	0.591	0.68
160_L	172_P	0.591	0.68
113_N	497_K	0.590	0.68
357_I	401_G	0.590	0.68
125_A	425_V	0.589	0.68
36_V	40_L	0.589	0.68
66_D	90_K	0.587	0.67
490_R	494_Y	0.585	0.67
121_D	168_G	0.585	0.67
170_Y	191_S	0.585	0.67
446_E	449_A	0.583	0.67
67_G	86_D	0.583	0.67
300_A	373_R	0.583	0.67
343_L	349_I	0.580	0.66
493_A	496_T	0.580	0.66
195_A	433_N	0.579	0.66
299_F	374_H	0.579	0.66
181_V	227_T	0.579	0.66
485_D	488_A	0.579	0.66
78_Q	239_L	0.578	0.66
280_H	297_A	0.578	0.66
222_D	295_I	0.578	0.66
184_N	232_I	0.578	0.66
188_Y	193_R	0.577	0.66
256_R	259_K	0.573	0.65
151_S	377_K	0.573	0.65
268_V	282_L	0.572	0.65
426_M	431_A	0.572	0.65
250_A	313_Q	0.571	0.65
268_V	281_E	0.570	0.65
335_D	377_K	0.569	0.65
378_M	405_M	0.569	0.65
113_N	251_P	0.569	0.65
68_V	98_T	0.569	0.65
174_F	410_F	0.569	0.65
338_A	378_M	0.568	0.65
419_P	480_A	0.568	0.65
469_A	477_V	0.568	0.65
106_Q	118_Y	0.567	0.65
113_N	153_R	0.566	0.64
279_M	319_A	0.565	0.64
416_L	478_I	0.565	0.64
391_S	406_A	0.565	0.64
430_A	434_A	0.564	0.64
106_Q	156_Q	0.564	0.64
439_K	443_L	0.563	0.64
100_E	104_R	0.563	0.64
358_P	396_K	0.563	0.64
119_L	467_R	0.561	0.64
11_E	22_E	0.561	0.64
495_M	498_E	0.560	0.64
436_Y	439_K	0.560	0.64
464_N	468_L	0.559	0.64
329_L	333_S	0.558	0.63
247_Q	348_H	0.556	0.63
491_L	494_Y	0.556	0.63
303_L	352_L	0.556	0.63
128_T	167_G	0.554	0.63
277_F	345_D	0.554	0.63
449_A	456_R	0.553	0.63
70_T	81_C	0.553	0.63
239_L	242_F	0.552	0.63
79_T	489_K	0.552	0.63
436_Y	458_E	0.551	0.62
437_A	442_E	0.550	0.62
165_A	188_Y	0.550	0.62
63_L	404_A	0.550	0.62
406_A	411_E	0.550	0.62
398_Y	424_A	0.549	0.62
23_K	30_E	0.549	0.62
362_I	400_A	0.548	0.62
478_I	486_E	0.547	0.62
167_G	426_M	0.546	0.62
87_S	91_A	0.546	0.62
240_S	253_H	0.546	0.62
353_F	406_A	0.546	0.62
255_K	259_K	0.546	0.62
55_F	466_Y	0.545	0.62
8_E	13_A	0.545	0.62
252_I	492_K	0.545	0.62
357_I	360_F	0.544	0.61
20_G	25_H	0.544	0.61
354_L	491_L	0.544	0.61
288_D	312_G	0.543	0.61
292_F	305_T	0.543	0.61
152_G	346_A	0.543	0.61
213_M	216_S	0.540	0.61
335_D	404_A	0.540	0.61
250_A	495_M	0.540	0.61
292_F	354_L	0.539	0.61
328_V	333_S	0.539	0.61
85_N	106_Q	0.538	0.61
181_V	228_E	0.538	0.61
195_A	208_M	0.538	0.61
411_E	468_L	0.537	0.60
493_A	497_K	0.535	0.60
174_F	189_L	0.535	0.60
141_G	407_G	0.534	0.60
443_L	450_A	0.534	0.60
9_R	17_R	0.533	0.60
167_G	170_Y	0.533	0.60
316_G	340_F	0.532	0.60
48_I	117_I	0.532	0.60
166_A	194_M	0.530	0.59
492_K	496_T	0.529	0.59
346_A	377_K	0.529	0.59
400_A	403_Y	0.528	0.59
351_L	387_V	0.526	0.59
36_V	41_S	0.526	0.59
183_G	313_Q	0.526	0.59
277_F	395_R	0.525	0.59
15_R	27_S	0.525	0.59
41_S	47_D	0.524	0.59
211_A	221_G	0.523	0.58
307_L	347_F	0.523	0.58
113_N	246_F	0.523	0.58
288_D	291_S	0.522	0.58
9_R	12_R	0.520	0.58
261_F	264_P	0.520	0.58
330_F	333_S	0.520	0.58
453_S	456_R	0.519	0.58
212_R	215_C	0.519	0.58
73_G	211_A	0.519	0.58
51_E	69_V	0.518	0.58
180_M	218_S	0.518	0.58
490_R	493_A	0.517	0.58
25_H	88_T	0.517	0.58
250_A	314_P	0.517	0.58
238_Y	293_F	0.515	0.57
43_L	119_L	0.515	0.57
104_R	108_I	0.515	0.57
40_L	48_I	0.515	0.57
22_E	30_E	0.514	0.57
460_K	463_I	0.513	0.57
121_D	161_F	0.513	0.57
285_R	290_D	0.512	0.57
400_A	425_V	0.512	0.57
17_R	21_A	0.512	0.57
363_G	375_G	0.512	0.57
283_I	304_L	0.511	0.57
469_A	474_I	0.511	0.57
122_S	163_P	0.511	0.57
415_C	474_I	0.510	0.57
303_L	378_M	0.510	0.57
249_K	252_I	0.510	0.57
148_V	357_I	0.508	0.56
144_F	170_Y	0.508	0.56
120_V	168_G	0.508	0.56
36_V	53_A	0.508	0.56
270_P	275_A	0.507	0.56
109_A	154_I	0.507	0.56
19_G	89_V	0.507	0.56
237_A	289_E	0.507	0.56
191_S	400_A	0.507	0.56
413_D	497_K	0.506	0.56
472_M	475_D	0.506	0.56
246_F	249_K	0.506	0.56
260_H	264_P	0.505	0.56
195_A	328_V	0.505	0.56
19_G	24_Y	0.504	0.56
439_K	451_F	0.503	0.56
252_I	255_K	0.503	0.56
241_Y	251_P	0.503	0.56
163_P	186_S	0.503	0.56
338_A	342_T	0.502	0.55
274_N	429_E	0.502	0.55
24_Y	27_S	0.502	0.55
252_I	314_P	0.501	0.55
8_E	17_R	0.500	0.55

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1vrgA	4	0.9902	100	0.117	Contact Map
3n6rB	4	0.9726	100	0.126	Contact Map
3u9rB	5	0.9863	100	0.146	Contact Map
2bzrA	4	0.9648	100	0.159	Contact Map
4rcnA	6	0.9198	100	0.16	Contact Map
1pixA	4	0.9941	100	0.164	Contact Map
3gf3A	4	0.9843	100	0.167	Contact Map
3iavA	4	0.9902	100	0.172	Contact Map
1on3A	6	0.9883	100	0.182	Contact Map
1x0uA	5	0.9902	100	0.2	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0117 seconds.