RASP - BACSU - GREMLIN Contacts

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RASP - Regulator of sigma-W protease RasP

UniProt:	O31754	Sequences: MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVKPGYTVGLLFNKEDQVEKVIINQKEKYPDALVIEVETADLEHDMKITGYEQGKEDELSSFTVSETSFFIVDGEEVQIAPYNRQFGSKPVWQRIKAIAAGPIMNFILAYVILVMLGLIQGVPSNEPMLGQLTDNGRAAEAGLKEGDYIQSINGEKMRSWTDIVSAVKENPEKEMDVAVKRDNKTLHISVTPEAVKDENKKTIGRFGSYAPTEKGVLSAVAYGATSTVDVTKAILTNLSKLVTGQFKLDMLSGPVGIYDMTDQVAKTGIVNLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINREKEAFVVFIGVAFLMLLMLVVTWNDIQRLFL	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	422 (412)
Sequences:	454 (341)
Seq/√Len:	16.8

ECOLI - RSEP
BACSU - RASP

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
121_H	159_Y	6.378	1.00
167_P	170_Q	6.301	1.00
329_S	333_G	6.094	1.00
33_I	174_A	4.250	1.00
281_G	284_G	4.166	1.00
278_K	284_G	4.025	1.00
189_I	350_F	4.016	1.00
256_V	265_I	4.004	1.00
123_M	156_I	3.931	1.00
16_L	360_L	3.526	1.00
187_Y	301_A	3.458	1.00
27_L	180_I	3.426	0.99
402_V	406_M	3.245	0.99
173_K	180_I	3.164	0.99
172_I	376_L	3.134	0.99
228_S	231_G	3.038	0.99
277_K	284_G	2.924	0.98
27_L	173_K	2.821	0.98
278_K	283_F	2.745	0.97
195_L	296_A	2.695	0.97
175_I	379_L	2.607	0.96
53_E	161_R	2.467	0.95
143_E	160_N	2.442	0.95
180_I	184_I	2.437	0.95
172_I	380_F	2.421	0.95
280_I	283_F	2.410	0.94
229_I	240_I	2.366	0.94
176_A	180_I	2.354	0.94
255_A	262_T	2.328	0.93
277_K	283_F	2.306	0.93
168_V	171_R	2.269	0.92
49_F	52_N	2.268	0.92
276_N	281_G	2.224	0.92
97_K	153_E	2.197	0.91
247_N	252_M	2.153	0.90
25_L	35_C	2.133	0.90
112_I	127_G	2.080	0.88
63_V	406_M	2.047	0.88
276_N	283_F	2.018	0.87
228_S	255_A	1.995	0.86
279_T	284_G	1.987	0.86
292_G	295_S	1.976	0.86
22_L	25_L	1.966	0.85
280_I	284_G	1.959	0.85
33_I	69_M	1.949	0.85
126_T	138_S	1.934	0.84
396_F	400_I	1.842	0.81
120_E	159_Y	1.842	0.81
234_M	240_I	1.830	0.81
18_F	58_I	1.827	0.81
26_L	181_M	1.825	0.81
277_K	281_G	1.776	0.79
170_Q	366_L	1.763	0.78
399_F	403_A	1.763	0.78
141_V	144_T	1.753	0.78
137_S	140_T	1.747	0.78
51_K	240_I	1.737	0.77
279_T	283_F	1.736	0.77
90_N	94_Q	1.732	0.77
390_N	393_K	1.712	0.76
10_I	356_L	1.707	0.76
192_M	196_I	1.702	0.76
124_K	138_S	1.698	0.76
257_K	260_N	1.687	0.75
181_M	184_I	1.679	0.75
25_L	102_Q	1.679	0.75
375_R	378_F	1.677	0.75
276_N	284_G	1.673	0.74
191_V	297_V	1.672	0.74
229_I	254_V	1.672	0.74
220_L	254_V	1.665	0.74
16_L	320_T	1.623	0.72
206_L	220_L	1.620	0.72
256_V	263_L	1.614	0.72
56_Y	67_V	1.587	0.70
116_T	126_T	1.574	0.70
377_L	381_I	1.552	0.69
169_W	173_K	1.545	0.68
234_M	280_I	1.542	0.68
336_D	420_L	1.519	0.67
166_K	375_R	1.511	0.66
25_L	56_Y	1.504	0.66
297_V	301_A	1.488	0.65
53_E	155_Q	1.477	0.65
175_I	375_R	1.458	0.64
12_I	189_I	1.448	0.63
314_N	363_V	1.446	0.63
278_K	282_R	1.439	0.63
19_F	52_N	1.438	0.63
226_I	351_Q	1.427	0.62
406_M	410_L	1.416	0.61
10_I	14_G	1.405	0.61
7_I	128_Y	1.404	0.61
247_N	250_K	1.398	0.60
204_P	234_M	1.398	0.60
211_D	216_A	1.387	0.60
199_V	244_V	1.383	0.59
123_M	160_N	1.375	0.59
66_F	174_A	1.369	0.59
168_V	376_L	1.364	0.58
13_F	17_V	1.363	0.58
224_D	258_R	1.362	0.58
375_R	379_L	1.362	0.58
5_T	366_L	1.350	0.57
166_K	175_I	1.342	0.57
98_V	125_I	1.331	0.56
272_V	282_R	1.329	0.56
119_L	141_V	1.312	0.55
255_A	259_D	1.303	0.55
210_T	213_G	1.296	0.54
276_N	280_I	1.283	0.54
31_A	173_K	1.282	0.53
225_Y	257_K	1.279	0.53
42_F	53_E	1.278	0.53
256_V	377_L	1.274	0.53
191_V	320_T	1.274	0.53
209_L	216_A	1.272	0.53
25_L	52_N	1.267	0.53
22_L	26_L	1.259	0.52
278_K	281_G	1.252	0.52
25_L	49_F	1.250	0.52
227_Q	257_K	1.242	0.51
255_A	264_H	1.241	0.51
344_T	348_N	1.224	0.50
377_L	397_V	1.217	0.50
290_E	295_S	1.210	0.49
215_A	220_L	1.206	0.49
206_L	241_V	1.198	0.49
193_L	197_Q	1.189	0.48
232_E	259_D	1.189	0.48
156_I	160_N	1.188	0.48
16_L	186_A	1.175	0.47
234_M	270_E	1.174	0.47
98_V	419_R	1.164	0.46
256_V	264_H	1.158	0.46
7_I	410_L	1.156	0.46
383_A	411_V	1.147	0.45
228_S	340_Q	1.139	0.45
321_G	356_L	1.128	0.44
236_S	240_I	1.121	0.44
340_Q	343_K	1.120	0.44
230_N	243_A	1.119	0.44
6_V	188_V	1.118	0.44
399_F	402_V	1.117	0.44
70_A	394_E	1.107	0.43
206_L	209_L	1.089	0.42
159_Y	368_I	1.086	0.42
346_I	350_F	1.085	0.42
239_D	343_K	1.083	0.42
100_I	151_G	1.083	0.42
385_R	390_N	1.079	0.42
228_S	239_D	1.079	0.42
27_L	40_I	1.078	0.41
18_F	40_I	1.075	0.41
120_E	162_Q	1.072	0.41
256_V	297_V	1.071	0.41
403_A	407_L	1.070	0.41
227_Q	262_T	1.063	0.41
207_G	400_I	1.060	0.40
43_G	62_P	1.060	0.40
293_V	387_K	1.058	0.40
213_G	216_A	1.056	0.40
336_D	340_Q	1.055	0.40
318_L	327_M	1.052	0.40
200_P	209_L	1.050	0.40
214_R	267_V	1.045	0.40
271_A	278_K	1.044	0.40
34_L	392_E	1.042	0.39
391_R	402_V	1.038	0.39
282_R	342_A	1.032	0.39
189_I	358_I	1.028	0.39
194_G	334_I	1.028	0.39
319_V	322_Q	1.027	0.39
243_A	252_M	1.027	0.39
236_S	239_D	1.023	0.38
166_K	378_F	1.022	0.38
221_K	258_R	1.021	0.38
175_I	353_A	1.016	0.38
13_F	183_F	1.013	0.38
216_A	244_V	1.009	0.38
207_G	222_E	1.008	0.37
18_F	22_L	1.007	0.37
366_L	406_M	1.007	0.37
39_A	363_V	0.997	0.37
13_F	45_K	0.993	0.37
42_F	66_F	0.989	0.36
380_F	384_I	0.983	0.36
230_N	235_R	0.983	0.36
11_I	350_F	0.983	0.36
73_D	397_V	0.978	0.36
211_D	266_S	0.978	0.36
326_D	400_I	0.977	0.36
35_C	110_L	0.977	0.36
386_G	393_K	0.970	0.35
233_K	264_H	0.968	0.35
183_F	361_G	0.966	0.35
386_G	390_N	0.965	0.35
187_Y	302_T	0.965	0.35
51_K	269_P	0.961	0.35
58_I	134_D	0.959	0.35
69_M	174_A	0.957	0.35
212_N	216_A	0.953	0.34
237_W	374_G	0.951	0.34
94_Q	140_T	0.951	0.34
102_Q	107_P	0.949	0.34
335_Y	377_L	0.949	0.34
15_T	19_F	0.948	0.34
53_E	352_F	0.947	0.34
103_K	150_D	0.947	0.34
254_V	267_V	0.945	0.34
387_K	390_N	0.945	0.34
92_E	260_N	0.945	0.34
202_N	207_G	0.944	0.34
13_F	57_T	0.941	0.34
47_F	104_E	0.938	0.34
299_Y	338_T	0.938	0.34
366_L	405_L	0.937	0.34
336_D	339_D	0.936	0.34
129_E	137_S	0.936	0.34
27_L	181_M	0.930	0.33
378_F	398_V	0.925	0.33
184_I	265_I	0.925	0.33
15_T	353_A	0.923	0.33
166_K	398_V	0.914	0.32
187_Y	272_V	0.905	0.32
99_I	166_K	0.904	0.32
175_I	378_F	0.899	0.32
92_E	244_V	0.898	0.32
8_A	11_I	0.898	0.32
260_N	263_L	0.895	0.31
27_L	30_R	0.893	0.31
51_K	188_V	0.889	0.31
340_Q	347_V	0.889	0.31
196_I	209_L	0.885	0.31
240_I	337_M	0.885	0.31
315_L	362_I	0.885	0.31
73_D	338_T	0.884	0.31
211_D	238_T	0.884	0.31
277_K	282_R	0.883	0.31
15_T	310_A	0.883	0.31
26_L	30_R	0.881	0.31
116_T	124_K	0.875	0.30
309_K	313_T	0.873	0.30
72_E	398_V	0.871	0.30
11_I	346_I	0.870	0.30
53_E	99_I	0.870	0.30
390_N	395_A	0.869	0.30
234_M	255_A	0.868	0.30
46_I	205_M	0.866	0.30
74_P	375_R	0.866	0.30
206_L	231_G	0.864	0.30
303_S	351_Q	0.862	0.30
55_V	319_V	0.861	0.30
217_E	273_K	0.858	0.30
291_K	296_A	0.858	0.30
342_A	349_L	0.857	0.30
376_L	406_M	0.857	0.30
99_I	375_R	0.850	0.29
73_D	376_L	0.849	0.29
142_S	160_N	0.849	0.29
228_S	233_K	0.849	0.29
72_E	375_R	0.847	0.29
84_T	341_V	0.846	0.29
209_L	226_I	0.844	0.29
136_L	292_G	0.840	0.29
80_K	102_Q	0.835	0.28
256_V	272_V	0.834	0.28
55_V	326_D	0.832	0.28
80_K	87_L	0.830	0.28
70_A	330_G	0.829	0.28
329_S	348_N	0.829	0.28
68_R	415_N	0.827	0.28
58_I	249_E	0.827	0.28
27_L	31_A	0.827	0.28
265_I	297_V	0.826	0.28
101_N	161_R	0.825	0.28
221_K	268_T	0.822	0.28
184_I	199_V	0.819	0.28
140_T	143_E	0.817	0.28
144_T	148_I	0.816	0.28
210_T	235_R	0.815	0.27
86_G	109_A	0.813	0.27
258_R	263_L	0.813	0.27
77_I	229_I	0.811	0.27
121_H	160_N	0.808	0.27
240_I	244_V	0.808	0.27
11_I	16_L	0.806	0.27
59_R	67_V	0.803	0.27
206_L	267_V	0.802	0.27
399_F	406_M	0.799	0.27
76_M	214_R	0.798	0.27
171_R	403_A	0.796	0.27
162_Q	407_L	0.796	0.27
316_S	320_T	0.795	0.27
92_E	211_D	0.792	0.26
7_I	10_I	0.791	0.26
168_V	173_K	0.789	0.26
357_S	369_P	0.786	0.26
193_L	355_F	0.785	0.26
291_K	295_S	0.784	0.26
334_I	337_M	0.782	0.26
44_P	330_G	0.779	0.26
314_N	318_L	0.779	0.26
293_V	297_V	0.779	0.26
188_V	253_D	0.777	0.26
248_P	284_G	0.777	0.26
240_I	273_K	0.777	0.26
167_P	173_K	0.776	0.26
318_L	322_Q	0.775	0.26
6_V	174_A	0.772	0.25
252_M	269_P	0.772	0.25
95_V	407_L	0.771	0.25
231_G	410_L	0.770	0.25
29_Q	54_T	0.770	0.25
351_Q	355_F	0.769	0.25
240_I	254_V	0.767	0.25
395_A	402_V	0.767	0.25
102_Q	302_T	0.764	0.25
131_G	134_D	0.763	0.25
93_D	267_V	0.763	0.25
20_H	24_H	0.762	0.25
21_E	24_H	0.762	0.25
208_Q	234_M	0.761	0.25
30_R	163_F	0.759	0.25
248_P	282_R	0.759	0.25
92_E	184_I	0.757	0.25
6_V	400_I	0.756	0.25
95_V	234_M	0.756	0.25
59_R	62_P	0.755	0.25
164_G	380_F	0.753	0.25
248_P	343_K	0.752	0.25
59_R	331_P	0.751	0.25
358_I	397_V	0.750	0.24
126_T	318_L	0.748	0.24
168_V	379_L	0.747	0.24
74_P	181_M	0.744	0.24
74_P	166_K	0.744	0.24
311_I	358_I	0.741	0.24
5_T	339_D	0.739	0.24
79_V	113_E	0.739	0.24
123_M	145_S	0.737	0.24
349_L	411_V	0.736	0.24
59_R	330_G	0.735	0.24
221_K	228_S	0.734	0.24
19_F	324_K	0.734	0.24
385_R	393_K	0.732	0.24
145_S	154_V	0.731	0.24
256_V	259_D	0.728	0.24
154_V	380_F	0.728	0.24
208_Q	222_E	0.726	0.23
220_L	267_V	0.724	0.23
241_V	259_D	0.723	0.23
259_D	262_T	0.721	0.23
148_I	375_R	0.721	0.23
221_K	261_K	0.720	0.23
92_E	217_E	0.719	0.23
223_G	264_H	0.718	0.23
89_F	174_A	0.715	0.23
253_D	302_T	0.714	0.23
308_T	358_I	0.712	0.23
125_I	417_I	0.712	0.23
195_L	300_G	0.711	0.23
376_L	380_F	0.709	0.23
196_I	256_V	0.708	0.23
14_G	356_L	0.708	0.23
10_I	75_E	0.708	0.23
317_K	322_Q	0.706	0.23
29_Q	56_Y	0.706	0.23
215_A	224_D	0.705	0.23
122_D	273_K	0.702	0.22
42_F	63_V	0.701	0.22
157_A	412_V	0.701	0.22
375_R	398_V	0.700	0.22
44_P	62_P	0.698	0.22
14_G	56_Y	0.698	0.22
47_F	253_D	0.697	0.22
228_S	234_M	0.696	0.22
55_V	220_L	0.696	0.22
155_Q	161_R	0.692	0.22
395_A	404_F	0.691	0.22
194_G	410_L	0.691	0.22
67_V	421_F	0.689	0.22
226_I	240_I	0.687	0.22
412_V	415_N	0.684	0.22
380_F	383_A	0.684	0.22
22_L	181_M	0.684	0.22
59_R	70_A	0.682	0.22
43_G	59_R	0.682	0.22
89_F	105_K	0.680	0.22
270_E	273_K	0.680	0.22
35_C	111_V	0.679	0.22
263_L	266_S	0.678	0.21
91_K	96_E	0.676	0.21
313_T	377_L	0.675	0.21
116_T	122_D	0.675	0.21
175_I	399_F	0.674	0.21
192_M	257_K	0.673	0.21
32_G	182_N	0.672	0.21
173_K	409_M	0.672	0.21
12_I	67_V	0.671	0.21
47_F	353_A	0.670	0.21
46_I	97_K	0.669	0.21
44_P	59_R	0.667	0.21
221_K	256_V	0.667	0.21
212_N	225_Y	0.664	0.21
14_G	18_F	0.663	0.21
208_Q	216_A	0.660	0.21
235_R	253_D	0.658	0.21
212_N	260_N	0.657	0.21
18_F	213_G	0.655	0.21
246_E	257_K	0.654	0.21
240_I	243_A	0.654	0.21
370_A	414_W	0.654	0.21
370_A	394_E	0.651	0.20
272_V	279_T	0.651	0.20
259_D	268_T	0.651	0.20
74_P	175_I	0.650	0.20
167_P	203_E	0.650	0.20
257_K	261_K	0.650	0.20
191_V	304_T	0.649	0.20
188_V	214_R	0.649	0.20
20_H	23_G	0.648	0.20
227_Q	256_V	0.648	0.20
94_Q	259_D	0.644	0.20
39_A	318_L	0.644	0.20
15_T	106_Y	0.641	0.20
53_E	375_R	0.641	0.20
16_L	37_E	0.641	0.20
53_E	101_N	0.640	0.20
188_V	289_T	0.639	0.20
100_I	403_A	0.637	0.20
166_K	379_L	0.637	0.20
25_L	172_I	0.637	0.20
231_G	264_H	0.637	0.20
70_A	401_G	0.637	0.20
318_L	328_L	0.636	0.20
414_W	418_Q	0.636	0.20
213_G	262_T	0.636	0.20
249_E	271_A	0.635	0.20
179_P	361_G	0.635	0.20
22_L	27_L	0.634	0.20
39_A	93_D	0.634	0.20
273_K	293_V	0.632	0.20
249_E	270_E	0.630	0.20
385_R	392_E	0.630	0.20
404_F	411_V	0.630	0.20
15_T	233_K	0.630	0.20
16_L	321_G	0.628	0.20
145_S	148_I	0.628	0.20
276_N	389_I	0.625	0.19
186_A	358_I	0.623	0.19
244_V	272_V	0.623	0.19
205_M	240_I	0.622	0.19
135_E	205_M	0.621	0.19
333_G	374_G	0.620	0.19
70_A	331_P	0.620	0.19
153_E	408_L	0.619	0.19
222_E	241_V	0.619	0.19
175_I	181_M	0.618	0.19
94_Q	141_V	0.616	0.19
31_A	196_I	0.615	0.19
279_T	282_R	0.613	0.19
63_V	402_V	0.613	0.19
368_I	398_V	0.612	0.19
251_E	266_S	0.610	0.19
314_N	322_Q	0.608	0.19
82_G	85_V	0.608	0.19
232_E	246_E	0.607	0.19
238_T	263_L	0.606	0.19
262_T	266_S	0.605	0.19
202_N	407_L	0.604	0.19
63_V	78_E	0.604	0.19
5_T	411_V	0.603	0.19
158_P	412_V	0.603	0.19
171_R	360_L	0.602	0.19
206_L	248_P	0.601	0.19
48_S	342_A	0.600	0.19
62_P	382_E	0.599	0.18
337_M	341_V	0.599	0.18
114_V	138_S	0.596	0.18
175_I	349_L	0.596	0.18
183_F	419_R	0.596	0.18
19_F	379_L	0.595	0.18
344_T	351_Q	0.595	0.18
339_D	393_K	0.595	0.18
129_E	363_V	0.595	0.18
15_T	18_F	0.593	0.18
124_K	215_A	0.592	0.18
19_F	204_P	0.591	0.18
42_F	376_L	0.591	0.18
334_I	374_G	0.590	0.18
196_I	228_S	0.589	0.18
25_L	339_D	0.586	0.18
209_L	225_Y	0.586	0.18
238_T	384_I	0.586	0.18
188_V	247_N	0.586	0.18
233_K	247_N	0.585	0.18
25_L	105_K	0.585	0.18
148_I	166_K	0.585	0.18
180_I	298_A	0.584	0.18
188_V	238_T	0.584	0.18
138_S	141_V	0.583	0.18
19_F	205_M	0.583	0.18
66_F	410_L	0.583	0.18
345_G	369_P	0.582	0.18
336_D	348_N	0.579	0.18
195_L	387_K	0.578	0.18
336_D	419_R	0.578	0.18
262_T	302_T	0.577	0.18
237_W	393_K	0.575	0.18
311_I	412_V	0.574	0.18
217_E	229_I	0.574	0.18
170_Q	189_I	0.573	0.18
173_K	329_S	0.573	0.18
83_Y	319_V	0.573	0.18
237_W	333_G	0.571	0.17
206_L	395_A	0.570	0.17
234_M	397_V	0.570	0.17
161_R	341_V	0.569	0.17
16_L	420_L	0.569	0.17
230_N	293_V	0.569	0.17
203_E	350_F	0.566	0.17
47_F	385_R	0.564	0.17
61_L	206_L	0.563	0.17
62_P	67_V	0.563	0.17
91_K	265_I	0.561	0.17
230_N	247_N	0.561	0.17
293_V	296_A	0.560	0.17
189_I	353_A	0.560	0.17
131_G	381_I	0.560	0.17
195_L	291_K	0.560	0.17
147_F	175_I	0.558	0.17
19_F	381_I	0.555	0.17
14_G	374_G	0.554	0.17
227_Q	319_V	0.552	0.17
259_D	264_H	0.552	0.17
45_K	57_T	0.552	0.17
16_L	377_L	0.552	0.17
111_V	181_M	0.552	0.17
187_Y	387_K	0.551	0.17
51_K	325_L	0.551	0.17
411_V	420_L	0.551	0.17
12_I	349_L	0.551	0.17
298_A	302_T	0.550	0.17
134_D	192_M	0.550	0.17
383_A	403_A	0.549	0.17
19_F	322_Q	0.549	0.17
36_R	408_L	0.548	0.17
43_G	382_E	0.547	0.17
39_A	59_R	0.546	0.17
393_K	418_Q	0.544	0.17
389_I	397_V	0.543	0.17
209_L	286_Y	0.542	0.17
167_P	236_S	0.541	0.16
93_D	261_K	0.541	0.16
181_M	188_V	0.541	0.16
99_I	106_Y	0.539	0.16
148_I	378_F	0.539	0.16
192_M	263_L	0.538	0.16
229_I	347_V	0.538	0.16
51_K	238_T	0.537	0.16
181_M	375_R	0.536	0.16
207_G	220_L	0.536	0.16
181_M	333_G	0.535	0.16
30_R	169_W	0.535	0.16
282_R	287_A	0.533	0.16
37_E	157_A	0.533	0.16
356_L	406_M	0.533	0.16
210_T	223_G	0.532	0.16
209_L	213_G	0.531	0.16
211_D	251_E	0.531	0.16
63_V	404_F	0.531	0.16
253_D	257_K	0.529	0.16
192_M	209_L	0.529	0.16
124_K	217_E	0.527	0.16
142_S	180_I	0.527	0.16
191_V	195_L	0.527	0.16
250_K	270_E	0.527	0.16
116_T	241_V	0.527	0.16
256_V	346_I	0.527	0.16
271_A	280_I	0.527	0.16
157_A	415_N	0.527	0.16
11_I	15_T	0.525	0.16
70_A	158_P	0.523	0.16
35_C	148_I	0.522	0.16
9_F	379_L	0.522	0.16
146_F	175_I	0.521	0.16
17_V	37_E	0.520	0.16
59_R	413_T	0.520	0.16
113_E	171_R	0.520	0.16
103_K	362_I	0.520	0.16
135_E	259_D	0.520	0.16
196_I	325_L	0.519	0.16
94_Q	139_F	0.518	0.16
175_I	398_V	0.518	0.16
158_P	415_N	0.517	0.16
9_F	113_E	0.517	0.16
72_E	378_F	0.517	0.16
213_G	221_K	0.516	0.16
307_V	358_I	0.516	0.16
8_A	18_F	0.516	0.16
7_I	356_L	0.516	0.16
6_V	252_M	0.515	0.16
14_G	324_K	0.514	0.16
181_M	378_F	0.511	0.16
396_F	402_V	0.511	0.16
153_E	173_K	0.510	0.15
230_N	253_D	0.509	0.15
106_Y	168_V	0.509	0.15
55_V	66_F	0.509	0.15
230_N	298_A	0.508	0.15
187_Y	305_V	0.506	0.15
58_I	396_F	0.506	0.15
45_K	388_P	0.505	0.15
73_D	334_I	0.504	0.15
173_K	184_I	0.503	0.15
231_G	236_S	0.501	0.15
12_I	353_A	0.500	0.15

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3b4rA	2	0.3697	99.8	0.878	Contact Map
2vz5A	1	0.2393	99.8	0.883	Contact Map
1v5lA	1	0.237	99.7	0.891	Contact Map
2zpmA	2	0.1872	99.6	0.896	Contact Map
3i18A	1	0.2227	99.6	0.899	Contact Map
1v5qA	1	0.2749	99.6	0.902	Contact Map
2kjpA	1	0.2109	99.5	0.905	Contact Map
3wkmA	1	0.4147	99.5	0.906	Contact Map
4c2eA	2	0.6019	99.5	0.906	Contact Map
3id1A	1	0.2038	99.5	0.906	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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