KIND - BACSU - GREMLIN Contacts

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KIND - Sporulation kinase D

UniProt:	O31671	Sequences: MLERCKLKILKGACGRVKLYIILVVIPAIVISFFVYEKEKDTIAAEHKQEASVLLNLHRNKINYLIGETMARMTSLSIAIDRPVDIKKMQSILEKTFDSEPRFSGLYFLNAKGDVTASTTELKTKVNLADRSFFIKAKETKKTVISDSYSSRITGQPIFTICVPVLDSKRNVTDYLVAAIQIDYLKNLINLLSPDVYIEVVNQDGKMIFASGQASHAEDQKPVSGYLDDISWNMKVYPNPVTIEELSKSLVLPLSCIIVLLNILFILVLYYLLKRQTQLERSENEAQKLELIGTLAASTAHEIRNPLTGISGFIQLLQKKYKGEEDQLYFSIIEQEIKRINQIVSEFLVLGKPTAEKWELNSLQDIIGEIMPIIYSEGNLYNVEVELQYLTEQPLLVKCTKDHIKQVILNVAKNGLESMPEGGKLTISLGALDKKAIIKVVDNGEGISQEMLDHIFLPFVTSKEKGTGLGLVVCKRIVLMYGGSIHIESEVRRGTEVTITLPVSAS	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	506 (439)
Sequences:	29410 (26643)
Seq/√Len:	1271.6

ECOLI - RCSC BARA RCSD TORS ATOS ZRAS ARCB CREC DCUS DPIB EVGS PHOQ GLRK CUSS CPXA PHOR BAES QSEC ENVZ YEDV RSTB NARX KDPD NARQ NTRB BASS YPDA
BACSU - KIND YVRG KINE KINA YYCG YESM PHOR RESE MALK DCTS CITS YCLK YKOH CSSS KINC KINB LYTS YVCQ GLNK COMP YCBM YXDK YRKQ BCES DEGS YHCY
HALSA - Q9HQ16 O51970 Q9HQG5 Q9HQ15 Q9HRG1 Q9HRE4 Q9HR10 Q9HNM2 BAT Q9HQB9 Q9HNA6 Q9HQE9

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
441_V	496_E	3.965	1.00
361_N	399_C	3.867	1.00
442_D	446_G	3.793	1.00
486_H	498_T	3.790	1.00
314_I	333_I	3.652	1.00
475_K	479_L	3.559	1.00
435_K	500_T	3.302	1.00
439_K	496_E	3.272	1.00
490_E	493_R	3.254	1.00
452_L	487_I	3.243	1.00
419_M	443_N	3.182	1.00
448_S	451_M	3.123	1.00
428_S	439_K	3.028	1.00
437_I	500_T	2.972	1.00
426_T	441_V	2.964	1.00
386_E	424_K	2.946	1.00
430_G	437_I	2.895	1.00
437_I	498_T	2.868	1.00
439_K	498_T	2.837	1.00
386_E	426_T	2.765	1.00
388_Q	428_S	2.764	1.00
399_C	481_Y	2.740	1.00
360_L	398_K	2.698	1.00
318_Q	334_E	2.676	1.00
487_I	497_V	2.587	1.00
430_G	439_K	2.578	1.00
428_S	441_V	2.577	1.00
488_E	496_E	2.565	1.00
388_Q	426_T	2.557	1.00
474_C	485_I	2.471	1.00
424_K	443_N	2.448	1.00
318_Q	331_S	2.427	1.00
311_S	337_I	2.422	1.00
447_I	451_M	2.373	1.00
359_E	401_K	2.360	1.00
362_S	365_D	2.355	1.00
451_M	454_H	2.281	1.00
489_S	495_T	2.278	1.00
478_V	483_G	2.262	1.00
419_M	423_G	2.246	1.00
478_V	499_I	2.206	1.00
369_E	405_K	2.199	1.00
384_E	424_K	2.197	1.00
374_I	409_L	2.177	1.00
407_V	478_V	2.159	1.00
196_V	271_Y	2.156	1.00
488_E	498_T	2.152	1.00
323_G	326_D	2.141	1.00
452_L	489_S	2.120	1.00
407_V	477_I	2.055	1.00
419_M	425_L	2.045	1.00
448_S	491_V	2.037	1.00
449_Q	452_L	2.011	1.00
456_F	485_I	2.000	1.00
447_I	455_I	2.000	1.00
407_V	474_C	1.999	1.00
484_S	500_T	1.988	1.00
423_G	443_N	1.971	1.00
479_L	484_S	1.885	1.00
438_I	499_I	1.880	1.00
322_K	326_D	1.852	1.00
364_Q	429_L	1.848	1.00
318_Q	327_Q	1.837	1.00
202_N	206_K	1.836	1.00
489_S	493_R	1.815	1.00
375_Y	379_N	1.814	1.00
408_I	438_I	1.813	1.00
272_L	275_R	1.753	1.00
403_H	406_Q	1.750	1.00
400_T	403_H	1.728	1.00
432_L	437_I	1.722	1.00
244_E	248_K	1.714	1.00
311_S	338_K	1.708	1.00
290_E	294_T	1.703	1.00
378_G	416_L	1.699	1.00
107_Y	177_V	1.698	1.00
418_S	461_T	1.672	1.00
358_W	398_K	1.665	1.00
276_Q	280_E	1.664	1.00
272_L	276_Q	1.655	1.00
454_H	460_V	1.642	1.00
315_Q	334_E	1.641	1.00
313_F	329_Y	1.638	1.00
213_Q	216_H	1.610	1.00
486_H	500_T	1.606	1.00
317_L	326_D	1.598	1.00
477_I	481_Y	1.591	1.00
314_I	334_E	1.584	1.00
341_N	345_S	1.544	1.00
199_E	268_V	1.531	1.00
186_K	189_I	1.526	1.00
309_G	313_F	1.524	1.00
454_H	457_L	1.499	1.00
399_C	404_I	1.489	1.00
451_M	460_V	1.487	1.00
110_N	114_D	1.476	1.00
185_L	189_I	1.444	1.00
317_L	330_F	1.440	1.00
276_Q	279_L	1.434	1.00
303_I	306_P	1.424	1.00
360_L	396_L	1.422	1.00
489_S	492_R	1.412	1.00
309_G	336_E	1.404	1.00
197_Y	270_Y	1.397	1.00
314_I	318_Q	1.397	1.00
401_K	405_K	1.386	1.00
377_E	380_L	1.385	1.00
286_A	289_L	1.374	1.00
310_I	337_I	1.366	1.00
260_L	263_I	1.361	1.00
160_T	179_A	1.359	1.00
457_L	460_V	1.348	1.00
105_G	179_A	1.346	1.00
282_S	285_E	1.343	1.00
278_Q	282_S	1.333	1.00
447_I	495_T	1.333	1.00
331_S	335_Q	1.325	1.00
104_S	180_I	1.317	1.00
277_T	280_E	1.315	1.00
167_D	171_N	1.299	1.00
280_E	284_N	1.293	1.00
320_K	326_D	1.291	1.00
362_S	395_L	1.285	1.00
364_Q	368_G	1.281	1.00
314_I	337_I	1.280	1.00
369_E	401_K	1.255	1.00
321_Y	326_D	1.252	1.00
166_L	172_V	1.250	1.00
389_Y	429_L	1.243	1.00
411_V	485_I	1.240	1.00
334_E	338_K	1.239	1.00
403_H	477_I	1.222	1.00
279_L	283_E	1.214	1.00
313_F	332_I	1.209	1.00
197_Y	217_A	1.205	1.00
371_M	387_L	1.196	1.00
478_V	485_I	1.194	1.00
362_S	396_L	1.192	1.00
241_V	249_S	1.189	1.00
253_P	276_Q	1.185	1.00
210_A	215_S	1.178	1.00
405_K	409_L	1.178	1.00
287_Q	290_E	1.178	1.00
342_Q	402_D	1.172	1.00
404_I	481_Y	1.171	1.00
302_E	306_P	1.162	1.00
90_Q	94_E	1.161	1.00
407_V	499_I	1.159	1.00
447_I	487_I	1.158	1.00
254_L	270_Y	1.153	1.00
447_I	452_L	1.152	1.00
186_K	190_N	1.151	1.00
368_G	387_L	1.150	1.00
403_H	480_M	1.149	1.00
292_I	296_A	1.148	1.00
476_R	479_L	1.146	1.00
413_K	417_E	1.146	1.00
244_E	250_L	1.140	1.00
310_I	333_I	1.136	1.00
228_D	232_W	1.129	1.00
336_E	339_R	1.125	1.00
275_R	278_Q	1.123	1.00
210_A	214_A	1.120	1.00
328_L	332_I	1.114	1.00
199_E	207_M	1.110	1.00
390_L	430_G	1.107	1.00
320_K	323_G	1.106	1.00
212_G	215_S	1.105	1.00
458_P	476_R	1.103	1.00
292_I	295_L	1.101	1.00
474_C	478_V	1.099	1.00
412_A	427_I	1.096	1.00
408_I	440_V	1.095	1.00
164_P	172_V	1.085	1.00
189_I	192_L	1.083	1.00
408_I	412_A	1.080	1.00
277_T	281_R	1.078	1.00
200_V	265_F	1.077	1.00
426_T	443_N	1.075	1.00
253_P	271_Y	1.073	1.00
367_I	429_L	1.071	1.00
455_I	487_I	1.069	1.00
451_M	462_S	1.069	1.00
361_N	366_I	1.066	1.00
303_I	340_I	1.064	1.00
370_I	412_A	1.063	1.00
406_Q	477_I	1.062	1.00
348_L	351_G	1.060	1.00
442_D	494_G	1.055	1.00
374_I	412_A	1.053	1.00
159_F	180_I	1.045	1.00
358_W	481_Y	1.044	1.00
322_K	325_E	1.042	1.00
132_S	136_K	1.042	1.00
452_L	456_F	1.039	1.00
295_L	299_T	1.038	1.00
366_I	370_I	1.036	1.00
371_M	375_Y	1.032	1.00
373_I	409_L	1.027	1.00
329_Y	333_I	1.027	1.00
258_I	263_I	1.024	1.00
327_Q	331_S	1.020	1.00
364_Q	389_Y	1.017	1.00
136_K	140_T	1.013	1.00
212_G	216_H	1.012	1.00
311_S	341_N	1.009	1.00
314_I	330_F	1.009	1.00
412_A	425_L	1.005	1.00
411_V	497_V	0.996	1.00
371_M	385_V	0.993	1.00
362_S	394_P	0.992	1.00
107_Y	115_V	0.983	1.00
324_E	327_Q	0.983	1.00
435_K	484_S	0.978	1.00
370_I	405_K	0.976	1.00
410_N	474_C	0.976	1.00
185_L	188_L	0.972	1.00
368_G	371_M	0.972	1.00
456_F	487_I	0.972	1.00
442_D	495_T	0.968	1.00
299_T	347_F	0.964	1.00
302_E	410_N	0.964	1.00
368_G	372_P	0.963	1.00
85_D	88_K	0.963	1.00
251_V	254_L	0.962	1.00
429_L	438_I	0.960	1.00
51_A	55_L	0.960	1.00
109_L	115_V	0.958	1.00
411_V	474_C	0.955	1.00
199_E	214_A	0.949	1.00
370_I	409_L	0.949	1.00
110_N	116_T	0.948	1.00
415_G	425_L	0.944	1.00
63_N	67_G	0.943	1.00
184_Y	187_N	0.943	1.00
296_A	299_T	0.941	1.00
345_S	349_V	0.940	1.00
313_F	333_I	0.939	1.00
476_R	480_M	0.938	1.00
363_L	436_A	0.937	1.00
89_M	93_L	0.937	1.00
283_E	286_A	0.936	1.00
432_L	435_K	0.934	1.00
135_I	139_E	0.933	1.00
121_E	124_T	0.927	1.00
200_V	209_F	0.926	1.00
312_G	316_L	0.925	1.00
332_I	335_Q	0.919	1.00
378_G	385_V	0.919	1.00
240_P	243_I	0.914	1.00
358_W	399_C	0.912	1.00
302_E	305_N	0.911	1.00
94_E	98_D	0.909	1.00
243_I	249_S	0.909	1.00
363_L	438_I	0.905	1.00
55_L	59_R	0.897	1.00
194_P	198_I	0.896	1.00
231_S	234_M	0.895	1.00
280_E	283_E	0.895	1.00
200_V	208_I	0.894	1.00
365_D	369_E	0.889	1.00
240_P	254_L	0.886	1.00
449_Q	490_E	0.883	1.00
390_L	393_Q	0.883	1.00
456_F	497_V	0.882	1.00
187_N	191_L	0.879	1.00
174_D	177_V	0.878	1.00
366_I	399_C	0.877	1.00
131_R	135_I	0.875	1.00
86_I	89_M	0.873	1.00
411_V	499_I	0.872	1.00
105_G	125_K	0.868	1.00
332_I	336_E	0.865	1.00
367_I	427_I	0.865	1.00
266_I	270_Y	0.862	1.00
374_I	416_L	0.859	1.00
183_D	187_N	0.856	1.00
446_G	495_T	0.856	1.00
65_L	68_E	0.853	1.00
447_I	489_S	0.850	1.00
59_R	63_N	0.849	1.00
372_P	375_Y	0.848	1.00
93_L	97_F	0.848	1.00
157_P	160_T	0.847	1.00
232_W	239_N	0.842	1.00
201_V	207_M	0.839	1.00
122_L	125_K	0.838	1.00
432_L	500_T	0.837	1.00
105_G	118_S	0.836	1.00
281_R	284_N	0.834	1.00
346_E	403_H	0.833	1.00
122_L	126_V	0.832	1.00
182_I	185_L	0.831	1.00
418_S	445_E	0.830	1.00
55_L	58_H	0.828	1.00
281_R	285_E	0.826	1.00
473_V	477_I	0.825	1.00
394_P	431_A	0.825	1.00
331_S	334_E	0.825	1.00
419_M	422_G	0.824	1.00
339_R	405_K	0.822	1.00
49_Q	52_S	0.822	1.00
311_S	315_Q	0.822	1.00
288_K	291_L	0.821	1.00
417_E	461_T	0.820	1.00
109_L	177_V	0.820	1.00
304_R	341_N	0.820	1.00
145_I	148_S	0.813	1.00
130_D	133_F	0.811	1.00
370_I	374_I	0.809	1.00
456_F	459_F	0.809	1.00
128_L	133_F	0.809	1.00
469_L	473_V	0.806	1.00
449_Q	453_D	0.806	1.00
315_Q	318_Q	0.805	1.00
486_H	499_I	0.804	1.00
367_I	408_I	0.802	1.00
447_I	453_D	0.799	1.00
109_L	162_C	0.799	1.00
243_I	246_L	0.796	1.00
65_L	69_T	0.796	1.00
188_L	191_L	0.796	1.00
52_S	56_N	0.793	1.00
118_S	123_K	0.793	1.00
390_L	428_S	0.792	1.00
410_N	413_K	0.792	1.00
342_Q	346_E	0.791	1.00
309_G	312_G	0.789	1.00
374_I	413_K	0.788	1.00
132_S	135_I	0.788	1.00
483_G	502_P	0.785	1.00
487_I	495_T	0.784	1.00
427_I	440_V	0.782	1.00
383_V	416_L	0.780	1.00
337_I	341_N	0.780	1.00
377_E	413_K	0.779	1.00
253_P	257_I	0.777	1.00
197_Y	211_S	0.775	1.00
378_G	425_L	0.772	1.00
275_R	279_L	0.772	1.00
67_G	70_M	0.770	1.00
128_L	131_R	0.769	1.00
311_S	334_E	0.766	1.00
194_P	197_Y	0.766	1.00
184_Y	188_L	0.763	1.00
201_V	205_G	0.760	1.00
472_V	476_R	0.760	1.00
297_A	300_A	0.759	1.00
128_L	135_I	0.759	1.00
231_S	235_K	0.758	1.00
437_I	486_H	0.755	1.00
278_Q	281_R	0.754	1.00
358_W	482_G	0.753	1.00
273_L	276_Q	0.751	1.00
478_V	501_L	0.749	1.00
302_E	406_Q	0.748	1.00
145_I	149_Y	0.748	1.00
328_L	331_S	0.744	1.00
162_C	175_Y	0.742	1.00
158_I	161_I	0.742	1.00
133_F	137_A	0.741	1.00
86_I	90_Q	0.739	1.00
376_S	380_L	0.738	1.00
335_Q	369_E	0.737	1.00
317_L	329_Y	0.735	1.00
373_I	405_K	0.735	1.00
152_R	155_G	0.735	1.00
305_N	309_G	0.733	1.00
350_L	472_V	0.732	1.00
309_G	332_I	0.729	1.00
325_E	329_Y	0.725	1.00
91_S	95_K	0.722	1.00
227_L	230_I	0.722	1.00
255_S	271_Y	0.717	1.00
182_I	186_K	0.717	1.00
333_I	337_I	0.716	1.00
483_G	501_L	0.714	1.00
298_S	458_P	0.713	1.00
202_N	208_I	0.712	1.00
69_T	72_R	0.712	1.00
352_K	467_T	0.712	1.00
415_G	440_V	0.711	1.00
92_I	95_K	0.711	1.00
313_F	336_E	0.710	1.00
306_P	313_F	0.709	1.00
242_T	245_E	0.707	1.00
417_E	463_K	0.705	1.00
120_T	124_T	0.701	1.00
53_V	57_L	0.696	1.00
54_L	57_L	0.695	1.00
297_A	303_I	0.691	1.00
316_L	329_Y	0.689	1.00
254_L	257_I	0.688	1.00
214_A	217_A	0.688	1.00
299_T	303_I	0.687	1.00
439_K	488_E	0.687	1.00
295_L	306_P	0.686	1.00
323_G	327_Q	0.686	1.00
377_E	381_Y	0.685	1.00
305_N	312_G	0.684	1.00
318_Q	330_F	0.684	1.00
143_T	148_S	0.683	1.00
243_I	247_S	0.682	1.00
91_S	94_E	0.681	1.00
318_Q	321_Y	0.681	1.00
162_C	177_V	0.681	1.00
424_K	441_V	0.681	1.00
364_Q	395_L	0.681	1.00
392_E	431_A	0.679	1.00
279_L	282_S	0.679	1.00
134_F	138_K	0.678	1.00
308_T	311_S	0.678	1.00
306_P	310_I	0.677	1.00
197_Y	210_A	0.677	1.00
300_A	304_R	0.677	1.00
317_L	333_I	0.677	1.00
348_L	352_K	0.676	1.00
402_D	405_K	0.673	1.00
297_A	306_P	0.672	1.00
241_V	251_V	0.671	1.00
293_G	354_T	0.671	1.00
324_E	328_L	0.670	1.00
110_N	113_G	0.669	1.00
317_L	320_K	0.669	1.00
336_E	340_I	0.667	1.00
301_H	410_N	0.666	1.00
351_G	355_A	0.666	1.00
230_I	234_M	0.665	1.00
378_G	383_V	0.665	1.00
308_T	312_G	0.665	1.00
256_C	266_I	0.665	1.00
265_F	269_L	0.663	1.00
88_K	92_I	0.662	1.00
105_G	119_T	0.662	1.00
211_S	214_A	0.661	1.00
455_I	497_V	0.661	1.00
316_L	321_Y	0.661	1.00
251_V	277_T	0.660	1.00
395_L	436_A	0.659	1.00
294_T	298_S	0.657	1.00
68_E	71_A	0.657	1.00
200_V	267_L	0.657	1.00
64_Y	68_E	0.657	1.00
455_I	472_V	0.656	1.00
203_Q	263_I	0.654	1.00
108_F	116_T	0.653	1.00
46_E	49_Q	0.652	1.00
124_T	127_N	0.650	1.00
299_T	306_P	0.649	1.00
261_L	264_L	0.648	1.00
411_V	440_V	0.647	1.00
47_H	51_A	0.647	1.00
92_I	96_T	0.646	1.00
47_H	50_E	0.646	1.00
406_Q	473_V	0.646	1.00
383_V	387_L	0.645	1.00
201_V	256_C	0.645	1.00
383_V	419_M	0.644	1.00
289_L	292_I	0.644	1.00
147_D	150_S	0.644	1.00
292_I	303_I	0.643	1.00
326_D	329_Y	0.639	1.00
304_R	345_S	0.634	1.00
393_Q	429_L	0.634	1.00
320_K	329_Y	0.633	1.00
115_V	118_S	0.632	1.00
445_E	495_T	0.631	1.00
483_G	499_I	0.631	1.00
315_Q	319_K	0.630	1.00
49_Q	53_V	0.628	1.00
130_D	134_F	0.628	1.00
160_T	177_V	0.627	1.00
60_N	64_Y	0.627	1.00
240_P	245_E	0.626	1.00
431_A	436_A	0.625	1.00
256_C	268_V	0.624	1.00
50_E	54_L	0.624	1.00
229_D	233_N	0.622	1.00
66_I	69_T	0.619	1.00
338_K	341_N	0.618	1.00
304_R	348_L	0.618	1.00
339_R	409_L	0.617	1.00
367_I	387_L	0.616	1.00
87_K	91_S	0.616	1.00
292_I	297_A	0.615	1.00
269_L	272_L	0.614	1.00
89_M	92_I	0.613	1.00
458_P	472_V	0.612	1.00
156_Q	181_Q	0.612	1.00
167_D	173_T	0.611	1.00
350_L	353_P	0.611	1.00
145_I	151_S	0.611	1.00
244_E	247_S	0.609	1.00
229_D	234_M	0.607	1.00
260_L	264_L	0.605	1.00
414_N	470_G	0.605	1.00
208_I	265_F	0.605	1.00
403_H	407_V	0.604	1.00
300_A	306_P	0.604	1.00
340_I	344_V	0.604	1.00
303_I	307_L	0.603	1.00
237_Y	253_P	0.603	1.00
246_L	249_S	0.603	1.00
210_A	217_A	0.602	1.00
406_Q	409_L	0.601	1.00
293_G	297_A	0.598	1.00
253_P	256_C	0.598	1.00
373_I	377_E	0.597	1.00
461_T	466_G	0.595	1.00
296_A	300_A	0.594	1.00
128_L	132_S	0.594	1.00
378_G	381_Y	0.594	1.00
50_E	53_V	0.592	1.00
211_S	217_A	0.592	1.00
250_L	258_I	0.590	1.00
247_S	251_V	0.589	1.00
196_V	213_Q	0.589	1.00
193_S	196_V	0.588	1.00
388_Q	430_G	0.588	1.00
326_D	330_F	0.588	1.00
294_T	458_P	0.587	1.00
108_F	174_D	0.587	1.00
376_S	379_N	0.587	1.00
316_L	320_K	0.586	1.00
308_T	313_F	0.585	1.00
120_T	123_K	0.585	1.00
87_K	90_Q	0.584	1.00
452_L	488_E	0.583	1.00
230_I	233_N	0.581	1.00
187_N	190_N	0.581	1.00
105_G	109_L	0.581	1.00
201_V	268_V	0.580	1.00
365_D	368_G	0.579	1.00
108_F	176_L	0.578	1.00
429_L	436_A	0.577	1.00
261_L	265_F	0.577	1.00
403_H	481_Y	0.576	1.00
252_L	256_C	0.575	1.00
157_P	161_I	0.574	1.00
302_E	336_E	0.572	1.00
366_I	405_K	0.572	1.00
44_A	47_H	0.571	1.00
111_A	172_V	0.570	1.00
272_L	279_L	0.569	1.00
61_K	64_Y	0.569	1.00
259_V	264_L	0.567	1.00
226_Y	229_D	0.566	1.00
335_Q	338_K	0.564	1.00
442_D	445_E	0.564	1.00
107_Y	118_S	0.564	1.00
160_T	164_P	0.564	1.00
448_S	462_S	0.564	1.00
384_E	387_L	0.562	1.00
242_T	250_L	0.561	1.00
172_V	175_Y	0.561	1.00
303_I	343_I	0.558	1.00
295_L	300_A	0.557	1.00
150_S	154_T	0.557	1.00
395_L	431_A	0.557	1.00
147_D	151_S	0.557	1.00
452_L	497_V	0.557	1.00
426_T	429_L	0.556	1.00
196_V	199_E	0.556	1.00
301_H	305_N	0.556	1.00
274_K	278_Q	0.556	1.00
365_D	401_K	0.555	1.00
136_K	139_E	0.555	1.00
207_M	210_A	0.551	1.00
118_S	122_L	0.550	1.00
242_T	246_L	0.550	1.00
349_V	403_H	0.550	1.00
409_L	413_K	0.549	1.00
350_L	476_R	0.549	1.00
351_G	354_T	0.548	1.00
159_F	162_C	0.548	1.00
441_V	490_E	0.547	1.00
310_I	314_I	0.546	1.00
46_E	50_E	0.545	1.00
329_Y	336_E	0.543	1.00
289_L	295_L	0.543	1.00
226_Y	233_N	0.542	1.00
61_K	65_L	0.542	1.00
137_A	140_T	0.541	1.00
245_E	248_K	0.540	1.00
58_H	61_K	0.540	1.00
130_D	135_I	0.540	1.00
272_L	280_E	0.540	1.00
313_F	316_L	0.540	1.00
383_V	443_N	0.539	1.00
255_S	260_L	0.539	1.00
361_N	401_K	0.538	1.00
328_L	372_P	0.538	1.00
164_P	168_S	0.536	1.00
56_N	60_N	0.536	1.00
310_I	313_F	0.536	1.00
210_A	213_Q	0.535	1.00
307_L	311_S	0.535	1.00
382_N	422_G	0.535	1.00
349_V	353_P	0.534	1.00
107_Y	179_A	0.534	1.00
485_I	499_I	0.534	1.00
304_R	313_F	0.534	1.00
259_V	265_F	0.534	1.00
198_I	211_S	0.534	1.00
108_F	117_A	0.533	1.00
366_I	401_K	0.533	1.00
188_L	192_L	0.533	1.00
227_L	231_S	0.531	1.00
250_L	254_L	0.531	1.00
325_E	328_L	0.530	1.00
474_C	477_I	0.529	1.00
415_G	419_M	0.528	1.00
477_I	480_M	0.528	1.00
241_V	244_E	0.527	1.00
379_N	382_N	0.527	1.00
340_I	347_F	0.527	1.00
338_K	342_Q	0.527	1.00
302_E	343_I	0.525	1.00
478_V	484_S	0.525	1.00
60_N	63_N	0.524	1.00
229_D	232_W	0.523	1.00
407_V	481_Y	0.523	1.00
289_L	293_G	0.522	1.00
245_E	249_S	0.522	1.00
146_S	149_Y	0.521	1.00
119_T	122_L	0.520	1.00
62_I	66_I	0.519	1.00
347_F	351_G	0.519	1.00
298_S	305_N	0.518	1.00
449_Q	489_S	0.518	1.00
158_I	179_A	0.517	1.00
66_I	70_M	0.517	1.00
295_L	302_E	0.516	1.00
251_V	274_K	0.516	1.00
252_L	255_S	0.514	1.00
58_H	65_L	0.514	1.00
329_Y	332_I	0.512	1.00
402_D	406_Q	0.511	1.00
88_K	91_S	0.510	1.00
366_I	404_I	0.510	1.00
300_A	305_N	0.509	1.00
258_I	264_L	0.509	1.00
95_K	98_D	0.509	1.00
451_M	455_I	0.509	1.00
151_S	154_T	0.508	1.00
342_Q	345_S	0.508	1.00
427_I	438_I	0.507	1.00
165_V	174_D	0.507	1.00
369_E	372_P	0.507	1.00
57_L	61_K	0.507	1.00
53_V	56_N	0.506	1.00
382_N	421_E	0.505	1.00
141_K	145_I	0.504	1.00
183_D	186_K	0.504	1.00
475_K	484_S	0.503	1.00
105_G	108_F	0.502	1.00
363_L	397_V	0.502	1.00
394_P	397_V	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4gczA	2	0.6542	100	0.441	Contact Map
4i5sA	2	0.7431	100	0.445	Contact Map
3a0rA	2	0.6166	100	0.447	Contact Map
3d36A	2	0.4328	100	0.511	Contact Map
4q20A	2	0.4486	100	0.515	Contact Map
4bixA	2	0.419	100	0.516	Contact Map
2c2aA	2	0.4545	100	0.518	Contact Map
3jz3A	2	0.3103	100	0.522	Contact Map
4mpcA	2	0.5909	100	0.523	Contact Map
2q8gA	2	0.5889	100	0.531	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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