GREMLIN Database
PTN3B - PTS system mannose-specific EIIBCA component
UniProt: O31645 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 650 (505)
Sequences: 377 (233)
Seq/√Len: 10.4

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
638_T641_E5.2271.00
508_P640_E4.7541.00
402_A453_F4.1770.99
518_E522_D4.0620.99
546_A571_A3.6810.98
475_A479_A3.5550.98
416_V438_M3.5520.98
416_V439_F3.5140.97
253_I258_I3.4720.97
406_T445_A3.3530.96
279_V407_G3.3080.96
529_Q533_R3.2780.96
471_A479_A3.2590.96
572_V600_F3.1610.95
549_N552_Q3.1400.95
317_V401_M3.0670.94
587_D593_G3.0420.94
305_L341_A3.0150.94
589_N593_G2.6290.88
245_K459_K2.6140.87
510_L536_A2.4960.85
581_I588_W2.4510.84
351_L400_I2.4410.83
287_T321_A2.4360.83
322_F341_A2.4350.83
472_P479_A2.3940.82
411_A442_A2.3680.81
512_E526_E2.3650.81
560_M621_S2.3600.81
511_I616_I2.2290.77
471_A478_E2.1920.76
471_A475_A2.1820.76
185_I410_I2.1750.75
468_S479_A2.1390.74
472_P480_A2.1260.74
235_G276_G2.0780.72
206_G568_K2.0720.72
530_K533_R2.0370.70
480_A483_N2.0100.69
475_A478_E2.0090.69
360_R443_V2.0090.69
399_S454_V1.9700.67
491_S498_E1.9630.67
477_S482_A1.9120.65
469_E479_A1.9060.65
476_P480_A1.8970.64
174_I216_Y1.8830.64
616_I645_L1.8820.64
429_V440_F1.8740.63
508_P573_R1.8460.62
402_A454_V1.8450.62
377_G443_V1.8340.62
311_F317_V1.8230.61
237_A646_L1.8190.61
286_L289_W1.8170.61
640_E644_K1.8030.60
323_L327_A1.7910.60
129_N225_L1.7810.59
575_P616_I1.7750.59
136_P311_F1.7590.58
135_V345_C1.6880.55
476_P479_A1.6870.55
562_I624_L1.6850.55
400_I404_S1.6850.55
358_G455_N1.6840.55
533_R586_V1.6820.55
642_A645_L1.6720.54
597_K634_L1.6650.54
209_I235_G1.6610.54
492_Q503_T1.6410.53
587_D636_V1.6390.53
561_N597_K1.6330.53
631_E635_S1.6330.53
614_L617_L1.6250.52
275_I600_F1.6200.52
621_S625_M1.6140.52
139_V301_L1.6110.51
469_E476_P1.6100.51
508_P643_Y1.6050.51
360_R459_K1.6030.51
257_I324_F1.5990.51
473_T477_S1.5980.51
402_A514_N1.5950.51
446_G450_T1.5900.50
127_L347_P1.5890.50
405_M409_V1.5820.50
131_V143_L1.5780.50
475_A480_A1.5610.49
448_L552_Q1.5580.49
545_Q549_N1.5580.49
558_I636_V1.5550.49
526_E530_K1.5530.49
622_R626_D1.5470.48
457_L575_P1.5410.48
194_I225_L1.5330.48
218_S280_A1.5180.47
209_I229_I1.5170.47
205_I628_N1.4890.46
480_A486_K1.4870.46
302_A361_K1.4710.45
577_V600_F1.4680.45
506_I537_L1.4650.45
476_P481_A1.4570.44
421_A558_I1.4400.44
129_N194_I1.4320.43
517_G582_K1.4270.43
469_E480_A1.4190.43
472_P476_P1.4160.42
345_C443_V1.4060.42
268_G321_A1.4010.42
209_I271_F1.3990.42
343_A428_A1.3990.42
594_S621_S1.3980.42
174_I555_T1.3880.41
148_A433_V1.3860.41
543_F567_G1.3830.41
470_T473_T1.3730.40
179_F252_P1.3710.40
569_S624_L1.3700.40
534_R631_E1.3690.40
249_A346_I1.3650.40
564_I617_L1.3560.40
514_N633_L1.3540.40
598_L634_L1.3530.40
529_Q541_S1.3490.39
536_A576_S1.3400.39
288_V638_T1.3280.38
234_A618_Q1.3200.38
579_F642_A1.3200.38
360_R364_A1.3180.38
469_E481_A1.3160.38
304_I321_A1.3130.38
411_A439_F1.3120.38
473_T481_A1.3120.38
293_M323_L1.3110.38
261_V330_G1.3070.38
414_G438_M1.3060.37
578_A598_L1.3040.37
240_W243_K1.2950.37
595_E598_L1.2940.37
543_F603_A1.2940.37
493_K500_K1.2910.37
468_S480_A1.2880.37
411_A416_V1.2820.36
441_I445_A1.2780.36
357_L489_I1.2660.36
261_V631_E1.2660.36
414_G441_I1.2640.36
560_M624_L1.2640.36
188_G217_D1.2610.36
230_A370_G1.2590.35
560_M630_R1.2580.35
534_R579_F1.2550.35
374_F378_L1.2540.35
305_L430_L1.2480.35
448_L452_L1.2430.35
569_S617_L1.2400.35
594_S627_D1.2350.34
188_G265_L1.2350.34
479_A482_A1.2350.34
218_S274_L1.2330.34
477_S483_N1.2310.34
237_A262_F1.2270.34
631_E644_K1.2260.34
174_I194_I1.2240.34
225_L526_E1.2200.34
480_A484_E1.2190.34
618_Q621_S1.2140.34
191_A391_Q1.2130.34
286_L572_V1.2030.33
515_L596_A1.1940.33
280_A618_Q1.1930.33
297_S447_S1.1920.33
237_A266_I1.1910.33
452_L503_T1.1900.33
394_L575_P1.1900.33
474_S522_D1.1830.32
535_G612_Q1.1820.32
229_I279_V1.1820.32
512_E618_Q1.1820.32
478_E486_K1.1780.32
564_I614_L1.1760.32
620_L646_L1.1750.32
496_M545_Q1.1730.32
561_N577_V1.1680.32
551_E556_T1.1670.32
304_I329_I1.1540.31
388_F446_G1.1510.31
474_S481_A1.1500.31
370_G604_V1.1500.31
457_L579_F1.1460.31
496_M519_T1.1440.31
213_G218_S1.1440.31
219_A222_A1.1420.31
479_A483_N1.1410.31
174_I217_D1.1360.30
341_A604_V1.1360.30
287_T420_V1.1350.30
136_P256_I1.1300.30
224_F279_V1.1270.30
123_I126_H1.1240.30
267_V368_E1.1240.30
577_V625_M1.1230.30
471_A481_A1.1200.30
224_F408_S1.1190.30
527_L601_M1.1140.30
482_A487_Q1.1100.29
471_A477_S1.1060.29
455_N465_P1.1060.29
342_V345_C1.1050.29
309_I345_C1.1050.29
469_E493_K1.1030.29
478_E481_A1.1030.29
467_L475_A1.1030.29
490_Q522_D1.1010.29
488_P498_E1.0880.29
401_M447_S1.0860.28
151_L185_I1.0840.28
469_E472_P1.0830.28
138_I172_E1.0760.28
339_P407_G1.0760.28
575_P621_S1.0740.28
125_R578_A1.0720.28
218_S586_V1.0720.28
468_S489_I1.0700.28
543_F547_I1.0700.28
472_P483_N1.0690.28
512_E530_K1.0670.28
125_R515_L1.0620.28
575_P604_V1.0590.27
136_P217_D1.0580.27
193_S525_D1.0560.27
580_G593_G1.0550.27
561_N617_L1.0550.27
322_F338_G1.0540.27
522_D552_Q1.0480.27
304_I416_V1.0470.27
469_E545_Q1.0400.27
511_I642_A1.0370.27
230_A322_F1.0340.27
217_D220_S1.0320.26
135_V351_L1.0310.26
300_L631_E1.0300.26
283_F420_V1.0290.26
498_E647_E1.0280.26
411_A606_K1.0270.26
543_F576_S1.0270.26
585_G597_K1.0250.26
524_I544_K1.0230.26
464_S533_R1.0200.26
347_P382_T1.0190.26
532_S537_L1.0190.26
283_F411_A1.0160.26
588_W597_K1.0160.26
463_A519_T1.0150.26
125_R338_G1.0150.26
350_G450_T1.0150.26
327_A419_R1.0100.26
558_I621_S1.0060.26
304_I332_G1.0030.25
415_N488_P1.0020.25
348_P377_G1.0020.25
469_E483_N0.9990.25
477_S484_E0.9960.25
210_A370_G0.9940.25
121_N239_L0.9930.25
287_T600_F0.9920.25
545_Q573_R0.9890.25
564_I595_E0.9860.25
558_I564_I0.9850.25
234_A441_I0.9840.25
302_A405_M0.9840.25
353_I531_L0.9830.25
185_I303_L0.9770.24
262_F452_L0.9760.24
473_T485_I0.9720.24
414_G442_A0.9720.24
542_G640_E0.9690.24
148_A324_F0.9640.24
242_K324_F0.9640.24
517_G526_E0.9620.24
302_A408_S0.9620.24
338_G625_M0.9610.24
271_F442_A0.9610.24
485_I489_I0.9610.24
488_P540_E0.9610.24
483_N487_Q0.9590.24
542_G628_N0.9590.24
504_D639_T0.9580.24
125_R643_Y0.9550.24
464_S628_N0.9550.24
560_M593_G0.9540.24
310_S389_A0.9520.24
212_T433_V0.9520.24
494_A500_K0.9490.24
306_G382_T0.9480.24
572_V598_L0.9470.23
519_T522_D0.9460.23
357_L490_Q0.9460.23
437_L497_S0.9460.23
407_G567_G0.9410.23
500_K644_K0.9320.23
637_Q641_E0.9320.23
124_Y128_M0.9310.23
235_G575_P0.9290.23
595_E621_S0.9290.23
173_Q180_S0.9270.23
585_G616_I0.9260.23
589_N594_S0.9250.23
249_A326_S0.9240.23
188_G365_S0.9200.23
628_N631_E0.9190.23
321_A627_D0.9170.22
588_W596_A0.9160.22
553_Q572_V0.9160.22
585_G611_N0.9140.22
589_N595_E0.9130.22
536_A581_I0.9100.22
247_P573_R0.9090.22
124_Y139_V0.9090.22
475_A483_N0.9080.22
183_I377_G0.9050.22
310_S400_I0.8990.22
519_T533_R0.8950.22
561_N594_S0.8930.22
494_A640_E0.8930.22
149_L246_V0.8830.21
188_G252_P0.8820.21
289_W557_A0.8800.21
126_H138_I0.8780.21
143_L210_A0.8760.21
404_S408_S0.8760.21
306_G348_P0.8760.21
564_I621_S0.8760.21
293_M542_G0.8760.21
516_S631_E0.8750.21
452_L491_S0.8730.21
496_M639_T0.8720.21
425_P443_V0.8720.21
508_P536_A0.8720.21
235_G266_I0.8710.21
241_I620_L0.8710.21
345_C380_G0.8700.21
305_L322_F0.8690.21
389_A397_I0.8680.21
384_G430_L0.8670.21
600_F629_Y0.8630.21
187_A230_A0.8610.21
411_A432_A0.8610.21
553_Q588_W0.8590.21
313_M399_S0.8580.21
416_V432_A0.8550.21
477_S486_K0.8550.21
448_L483_N0.8550.21
522_D581_I0.8540.20
470_T477_S0.8530.20
224_F564_I0.8520.20
256_I311_F0.8520.20
570_E628_N0.8500.20
250_I506_I0.8500.20
635_S638_T0.8490.20
210_A234_A0.8490.20
237_A448_L0.8480.20
323_L421_A0.8470.20
325_G338_G0.8450.20
303_L509_E0.8450.20
436_V440_F0.8450.20
562_I581_I0.8440.20
188_G211_A0.8440.20
188_G276_G0.8430.20
257_I379_F0.8420.20
191_A317_V0.8420.20
468_S488_P0.8420.20
606_K617_L0.8380.20
447_S486_K0.8370.20
328_M338_G0.8360.20
227_G458_K0.8350.20
201_V578_A0.8340.20
415_N579_F0.8340.20
190_I441_I0.8340.20
509_E533_R0.8330.20
485_I611_N0.8330.20
474_S479_A0.8310.20
300_L396_V0.8280.20
530_K632_R0.8260.20
317_V447_S0.8220.20
131_V627_D0.8220.20
409_V413_I0.8210.20
414_G511_I0.8210.20
244_L564_I0.8210.20
474_S480_A0.8190.19
138_I230_A0.8190.19
521_D571_A0.8180.19
416_V435_H0.8150.19
262_F573_R0.8150.19
572_V646_L0.8140.19
604_V617_L0.8120.19
305_L452_L0.8110.19
483_N486_K0.8100.19
560_M587_D0.8080.19
616_I619_M0.8080.19
141_G424_G0.8070.19
348_P382_T0.8040.19
577_V619_M0.8030.19
265_L357_L0.8020.19
303_L337_M0.7980.19
497_S501_K0.7980.19
196_D636_V0.7950.19
536_A623_K0.7940.19
627_D631_E0.7920.19
533_R632_R0.7900.19
473_T482_A0.7880.19
499_F519_T0.7860.18
302_A371_K0.7840.18
448_L471_A0.7830.18
175_G427_V0.7820.18
117_E353_I0.7820.18
210_A323_L0.7800.18
481_A484_E0.7790.18
469_E473_T0.7790.18
344_I380_G0.7790.18
545_Q554_G0.7770.18
507_S520_S0.7750.18
413_I474_S0.7730.18
555_T638_T0.7710.18
413_I555_T0.7660.18
139_V388_F0.7640.18
506_I577_V0.7630.18
577_V585_G0.7630.18
410_I445_A0.7620.18
596_A621_S0.7590.18
477_S480_A0.7590.18
519_T639_T0.7590.18
475_A485_I0.7570.18
611_N618_Q0.7570.18
532_S638_T0.7560.18
293_M330_G0.7550.18
135_V378_L0.7550.18
414_G616_I0.7550.18
384_G446_G0.7540.18
587_D644_K0.7530.18
521_D525_D0.7520.18
135_V342_V0.7520.18
131_V152_G0.7510.18
505_I615_K0.7490.17
611_N633_L0.7490.17
528_I544_K0.7480.17
488_P496_M0.7480.17
126_H193_S0.7450.17
432_A436_V0.7440.17
448_L495_E0.7440.17
536_A555_T0.7430.17
210_A614_L0.7420.17
230_A341_A0.7410.17
376_M425_P0.7410.17
476_P484_E0.7400.17
523_I641_E0.7370.17
491_S541_S0.7360.17
558_I568_K0.7360.17
589_N634_L0.7350.17
492_Q496_M0.7300.17
336_I344_I0.7300.17
514_N639_T0.7300.17
130_G141_G0.7290.17
252_P350_G0.7280.17
489_I492_Q0.7270.17
179_F310_S0.7270.17
477_S481_A0.7250.17
558_I646_L0.7240.17
458_K630_R0.7240.17
368_E548_L0.7240.17
185_I542_G0.7220.17
306_G376_M0.7200.17
533_R640_E0.7190.17
473_T476_P0.7170.17
239_L305_L0.7170.17
624_L629_Y0.7160.17
498_E508_P0.7150.17
179_F400_I0.7150.17
149_L418_D0.7140.17
169_K172_E0.7080.16
207_G330_G0.7080.16
138_I221_G0.7060.16
579_F617_L0.7050.16
519_T571_A0.7050.16
271_F373_A0.7050.16
303_L518_E0.7030.16
135_V201_V0.7030.16
301_L440_F0.7020.16
602_I620_L0.7000.16
494_A570_E0.6990.16
196_D376_M0.6970.16
209_I354_A0.6970.16
545_Q552_Q0.6970.16
309_I382_T0.6960.16
241_I588_W0.6960.16
515_L578_A0.6950.16
121_N208_Y0.6950.16
147_V262_F0.6940.16
177_A334_Y0.6940.16
225_L357_L0.6920.16
325_G600_F0.6910.16
323_L588_W0.6890.16
624_L646_L0.6890.16
340_I404_S0.6880.16
138_I252_P0.6860.16
331_E627_D0.6850.16
477_S494_A0.6820.16
330_G402_A0.6810.16
235_G392_D0.6810.16
468_S475_A0.6810.16
515_L580_G0.6800.16
474_S477_S0.6780.16
253_I317_V0.6780.16
523_I582_K0.6780.16
577_V588_W0.6760.16
129_N179_F0.6760.16
477_S493_K0.6750.16
394_L461_I0.6750.16
492_Q495_E0.6730.16
229_I407_G0.6720.15
135_V320_V0.6710.15
138_I256_I0.6710.15
330_G399_S0.6700.15
183_I227_G0.6700.15
174_I616_I0.6680.15
271_F279_V0.6670.15
351_L405_M0.6670.15
171_I268_G0.6660.15
487_Q545_Q0.6640.15
169_K185_I0.6620.15
309_I344_I0.6620.15
606_K612_Q0.6620.15
203_G207_G0.6610.15
323_L338_G0.6610.15
561_N569_S0.6600.15
394_L646_L0.6570.15
604_V622_R0.6570.15
209_I556_T0.6570.15
514_N596_A0.6560.15
626_D631_E0.6560.15
470_T480_A0.6560.15
215_F528_I0.6550.15
195_A370_G0.6550.15
586_V599_I0.6530.15
507_S534_R0.6530.15
469_E611_N0.6520.15
441_I554_G0.6510.15
489_I509_E0.6510.15
520_S576_S0.6500.15
411_A630_R0.6490.15
136_P304_I0.6480.15
473_T584_S0.6480.15
562_I631_E0.6470.15
557_A588_W0.6470.15
400_I407_G0.6470.15
514_N632_R0.6460.15
392_D461_I0.6450.15
495_E552_Q0.6450.15
255_P425_P0.6450.15
497_S584_S0.6430.15
220_S227_G0.6430.15
303_L401_M0.6420.15
450_T572_V0.6420.15
309_I379_F0.6420.15
144_L221_G0.6410.15
415_N508_P0.6410.15
432_A439_F0.6390.15
336_I399_S0.6370.15
515_L636_V0.6360.15
240_W369_M0.6330.15
512_E589_N0.6320.15
185_I212_T0.6320.15
258_I401_M0.6320.15
156_T171_I0.6300.14
322_F380_G0.6280.14
137_F257_I0.6280.14
467_L631_E0.6270.14
465_P497_S0.6270.14
324_F379_F0.6230.14
243_K642_A0.6230.14
273_F599_I0.6220.14
141_G422_H0.6210.14
516_S584_S0.6200.14
466_V492_Q0.6200.14
515_L598_L0.6180.14
441_I470_T0.6170.14
416_V442_A0.6160.14
540_E572_V0.6160.14
540_E552_Q0.6130.14
176_S180_S0.6120.14
302_A404_S0.6120.14
564_I587_D0.6110.14
510_L575_P0.6100.14
209_I571_A0.6090.14
220_S279_V0.6090.14
561_N624_L0.6080.14
321_A600_F0.6060.14
245_K570_E0.6050.14
282_I327_A0.6040.14
132_S141_G0.6040.14
499_F645_L0.6040.14
522_D640_E0.6030.14
296_S453_F0.6020.14
133_F263_A0.6020.14
471_A486_K0.6010.14
469_E477_S0.6010.14
489_I493_K0.5990.14
265_L552_Q0.5990.14
416_V430_L0.5990.14
309_I425_P0.5960.14
576_S636_V0.5950.14
532_S612_Q0.5950.14
463_A628_N0.5940.14
322_F646_L0.5930.14
593_G625_M0.5930.14
574_E632_R0.5920.14
246_V373_A0.5910.14
452_L511_I0.5910.14
506_I644_K0.5910.14
501_K637_Q0.5910.14
476_P483_N0.5900.14
218_S283_F0.5900.14
340_I407_G0.5900.14
562_I616_I0.5870.14
322_F578_A0.5870.14
536_A588_W0.5870.14
188_G219_A0.5860.14
541_S642_A0.5850.13
531_L596_A0.5850.13
185_I282_I0.5840.13
369_M443_V0.5840.13
129_N625_M0.5820.13
631_E639_T0.5810.13
444_I544_K0.5810.13
176_S628_N0.5800.13
473_T483_N0.5800.13
306_G309_I0.5790.13
126_H191_A0.5780.13
452_L456_V0.5780.13
373_A420_V0.5780.13
135_V380_G0.5760.13
401_M479_A0.5750.13
508_P635_S0.5740.13
575_P601_M0.5700.13
305_L614_L0.5700.13
471_A483_N0.5680.13
517_G643_Y0.5680.13
377_G388_F0.5670.13
460_D504_D0.5660.13
262_F644_K0.5660.13
177_A399_S0.5650.13
133_F189_Y0.5650.13
629_Y634_L0.5650.13
413_I643_Y0.5630.13
533_R579_F0.5620.13
491_S501_K0.5610.13
580_G621_S0.5610.13
342_V371_K0.5610.13
148_A391_Q0.5600.13
498_E502_L0.5590.13
577_V645_L0.5590.13
235_G429_V0.5590.13
593_G636_V0.5570.13
339_P346_I0.5560.13
452_L481_A0.5560.13
444_I584_S0.5560.13
357_L619_M0.5560.13
303_L308_M0.5550.13
312_D315_G0.5540.13
580_G604_V0.5530.13
516_S552_Q0.5520.13
483_N496_M0.5520.13
509_E570_E0.5520.13
217_D276_G0.5500.13
557_A581_I0.5500.13
185_I416_V0.5500.13
340_I396_V0.5480.13
498_E640_E0.5470.13
474_S529_Q0.5460.13
478_E482_A0.5460.13
507_S579_F0.5460.13
406_T509_E0.5450.13
561_N595_E0.5440.13
596_A625_M0.5420.13
552_Q574_E0.5420.13
537_L543_F0.5410.13
639_T644_K0.5380.12
233_L626_D0.5370.12
344_I432_A0.5370.12
192_Y242_K0.5370.12
505_I514_N0.5370.12
179_F338_G0.5370.12
206_G259_I0.5360.12
525_D544_K0.5340.12
558_I643_Y0.5340.12
440_F594_S0.5340.12
469_E486_K0.5320.12
409_V412_M0.5320.12
224_F400_I0.5320.12
494_A498_E0.5320.12
487_Q533_R0.5310.12
194_I210_A0.5300.12
397_I403_G0.5300.12
435_H438_M0.5300.12
341_A418_D0.5300.12
283_F376_M0.5290.12
564_I569_S0.5280.12
185_I400_I0.5280.12
125_R624_L0.5270.12
640_E645_L0.5270.12
414_G439_F0.5270.12
553_Q569_S0.5270.12
576_S588_W0.5250.12
513_P616_I0.5240.12
397_I450_T0.5240.12
551_E600_F0.5240.12
548_L569_S0.5230.12
210_A630_R0.5230.12
463_A570_E0.5210.12
471_A484_E0.5210.12
210_A230_A0.5200.12
214_S217_D0.5190.12
522_D635_S0.5190.12
441_I496_M0.5180.12
560_M643_Y0.5170.12
530_K549_N0.5170.12
484_E496_M0.5160.12
467_L492_Q0.5150.12
233_L493_K0.5150.12
477_S488_P0.5140.12
231_G370_G0.5140.12
400_I408_S0.5140.12
182_M313_M0.5130.12
253_I401_M0.5130.12
560_M604_V0.5120.12
309_I376_M0.5120.12
302_A396_V0.5110.12
577_V606_K0.5110.12
189_Y339_P0.5110.12
221_G327_A0.5110.12
254_M389_A0.5110.12
301_L442_A0.5090.12
140_V253_I0.5090.12
309_I348_P0.5080.12
536_A647_E0.5070.12
193_S299_I0.5070.12
562_I600_F0.5070.12
352_G426_I0.5060.12
215_F258_I0.5060.12
234_A286_L0.5050.12
643_Y647_E0.5050.12
569_S616_I0.5040.12
205_I606_K0.5030.12
560_M646_L0.5020.12
586_V596_A0.5020.12
227_G506_I0.5020.12
583_R635_S0.5000.12
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2r48A 1 0.16 100 0.831 Contact Map
1a6jA 4 0.2385 100 0.861 Contact Map
3qnqA 2 0.56 100 0.864 Contact Map
1a3aA 2 0.22 100 0.864 Contact Map
3urrA 2 0.2308 100 0.864 Contact Map
2r4qA 1 0.1569 100 0.865 Contact Map
2a0jA 1 0.2231 100 0.866 Contact Map
3oxpA 2 0.2231 100 0.868 Contact Map
2oq3A 1 0.2215 100 0.869 Contact Map
4m62S 1 0.2262 100 0.869 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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