YJCD - BACSU - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

YJCD - Putative ATP-dependent DNA helicase YjcD

UniProt:	O31626	Sequences: MKCARLNDRIIHLHTYSREHYQFLFEEGIKGHLFCSHCGKPVLLRLNIADPPEFIHRQPGDFPACEEACEPKPSKEGKKEDDQESGVIRLPKGKAIAADPSPAVTEWHRPRSIKPGTPFVPKTIEPDTSLFPSVGLNTDQLKAVTETEGPLLVLAGAGSGKTRVLTARAAHMIEHLGIPPENMLLVTFTTKAVAEMKERMANQYGLQPAKVRRIVTGTFHSLFYKILYHSNSAKWNGEHLLKMEWQREQYIKKALYEEGIDEKESPVDQALQQIGFWKNTYVPNERIPLKDEWEKQVYRLYEHYERQKKEHSQFDFDDMASACYELFIERPDLLEQYQSRFTYILIDEFQDINPVQYKIMQMLASPEQNLCCVGDDDQSIYAFRGSNPSFILDFQKDYPGAKTIYLTANYRSTHPIVSSADIVVKKNKNRYAKTLEAARDDIQVPVLFYPYDEEEEATMVVSDIKEKIQNGASPEDFAVLYRTNSGGRAIYERLHQSSIPYTADRGVQSFYSRRIVRQILAYLYASQNEDDTEAIKHLLPALFLKQSALNTLKALSITEDCTMIKALAKLPDLKPFQLDKIKKIVPFFASLRTMKPVEAITFAEGKMGFSEYLKKRGNEGNKLEKGSDDLRDIKVVAKKFKTIPDFLAHVDHMRAAEKNRTDEHGVQLMTIHRSKGLEFKTVYVLGTVDGSIPHDFSLETARKGDEAALEEERRLLYVAMTRAKQHLYLSCPANRRGKTANRSRFLYPLLQKARQPLHH	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	759 (608)
Sequences:	7458 (5099)
Seq/√Len:	206.8

ECOLI - UVRD REP RECB
BACSU - YJCD PCRA ADDA ADDB
HALSA - Q9HMB4

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
182_N	342_T	4.625	1.00
671_I	719_A	4.545	1.00
328_I	358_K	4.078	1.00
460_V	685_L	3.852	1.00
141_L	145_T	3.681	1.00
142_K	402_K	3.587	1.00
687_T	729_L	3.561	1.00
680_K	725_Q	3.479	1.00
689_D	744_R	3.432	1.00
463_D	466_E	3.340	1.00
499_I	666_V	3.330	1.00
136_L	144_V	3.222	1.00
680_K	724_K	3.145	1.00
137_N	410_Y	3.066	1.00
325_E	329_E	3.021	1.00
463_D	683_Y	2.886	1.00
357_Y	397_D	2.870	1.00
476_D	680_K	2.784	1.00
468_I	474_P	2.756	1.00
684_V	719_A	2.718	1.00
475_E	664_H	2.711	1.00
473_S	664_H	2.706	1.00
146_E	151_L	2.687	1.00
681_T	726_H	2.654	1.00
414_H	418_S	2.553	1.00
322_A	325_E	2.531	1.00
439_R	725_Q	2.529	1.00
223_F	323_C	2.471	1.00
139_D	142_K	2.470	1.00
472_A	681_T	2.456	1.00
303_H	306_R	2.354	1.00
465_K	497_S	2.342	1.00
314_F	322_A	2.320	1.00
535_I	539_L	2.294	1.00
590_S	606_K	2.233	1.00
331_P	334_L	2.218	1.00
215_V	341_F	2.190	1.00
179_P	182_N	2.185	1.00
463_D	728_Y	2.160	1.00
600_I	637_A	2.159	1.00
481_Y	668_L	2.143	1.00
275_G	317_D	2.137	1.00
327_F	334_L	2.127	1.00
361_Q	397_D	2.109	1.00
151_L	404_I	2.087	1.00
389_S	393_D	2.059	1.00
320_A	355_V	2.050	1.00
307_Q	310_E	2.047	1.00
217_G	222_L	2.025	1.00
681_T	728_Y	2.005	1.00
611_E	614_K	2.005	1.00
683_Y	728_Y	2.003	1.00
447_L	731_C	1.990	1.00
474_P	500_P	1.968	1.00
450_P	459_M	1.953	1.00
368_Q	400_G	1.943	1.00
464_I	477_F	1.914	1.00
490_I	685_L	1.912	1.00
472_A	725_Q	1.911	1.00
334_L	338_Q	1.910	1.00
230_S	336_Q	1.906	1.00
377_D	430_R	1.895	1.00
426_K	748_P	1.891	1.00
461_V	497_S	1.883	1.00
669_M	679_F	1.877	1.00
602_F	606_K	1.877	1.00
671_I	692_I	1.862	1.00
536_K	553_K	1.850	1.00
167_A	203_Q	1.846	1.00
153_V	371_C	1.842	1.00
236_N	312_S	1.830	1.00
640_F	645_D	1.828	1.00
594_M	602_F	1.806	1.00
394_F	401_A	1.802	1.00
306_R	310_E	1.801	1.00
232_S	333_L	1.796	1.00
171_H	175_H	1.781	1.00
531_D	534_A	1.776	1.00
242_K	313_Q	1.775	1.00
354_P	387_N	1.770	1.00
479_V	494_L	1.768	1.00
443_Q	726_H	1.759	1.00
422_I	750_L	1.758	1.00
713_R	748_P	1.758	1.00
481_Y	487_G	1.746	1.00
482_R	712_E	1.745	1.00
684_V	729_L	1.743	1.00
303_H	307_Q	1.736	1.00
408_A	436_E	1.735	1.00
151_L	371_C	1.733	1.00
163_R	167_A	1.731	1.00
460_V	490_I	1.722	1.00
257_E	303_H	1.711	1.00
626_G	629_D	1.704	1.00
687_T	716_L	1.701	1.00
459_M	730_S	1.697	1.00
610_S	627_S	1.696	1.00
568_A	589_A	1.694	1.00
609_F	613_L	1.689	1.00
449_Y	731_C	1.682	1.00
720_M	727_L	1.679	1.00
467_K	477_F	1.666	1.00
472_A	477_F	1.666	1.00
307_Q	311_H	1.659	1.00
456_E	730_S	1.652	1.00
254_A	307_Q	1.651	1.00
226_I	327_F	1.649	1.00
408_A	438_A	1.643	1.00
283_P	286_R	1.642	1.00
335_E	339_S	1.639	1.00
346_I	360_M	1.631	1.00
473_S	476_D	1.625	1.00
419_S	445_P	1.621	1.00
742_R	746_L	1.616	1.00
467_K	681_T	1.612	1.00
637_A	646_F	1.600	1.00
230_S	337_Y	1.599	1.00
468_I	477_F	1.598	1.00
494_L	668_L	1.597	1.00
169_A	185_L	1.591	1.00
254_A	303_H	1.589	1.00
518_Q	537_H	1.586	1.00
327_F	362_M	1.581	1.00
423_V	720_M	1.580	1.00
291_D	294_E	1.578	1.00
467_K	472_A	1.575	1.00
195_E	199_R	1.574	1.00
344_I	364_A	1.564	1.00
222_L	226_I	1.552	1.00
462_S	497_S	1.548	1.00
145_T	171_H	1.546	1.00
281_Y	355_V	1.545	1.00
330_R	333_L	1.538	1.00
525_A	538_L	1.536	1.00
172_M	178_I	1.534	1.00
235_W	322_A	1.519	1.00
139_D	408_A	1.516	1.00
358_K	361_Q	1.511	1.00
254_A	258_E	1.506	1.00
170_A	203_Q	1.488	1.00
335_E	338_Q	1.478	1.00
467_K	683_Y	1.475	1.00
334_L	362_M	1.472	1.00
535_I	567_L	1.470	1.00
211_V	214_I	1.470	1.00
184_L	344_I	1.467	1.00
314_F	319_M	1.467	1.00
251_I	300_L	1.465	1.00
257_E	307_Q	1.461	1.00
149_G	369_N	1.455	1.00
331_P	335_E	1.453	1.00
419_S	720_M	1.451	1.00
633_I	637_A	1.445	1.00
302_E	306_R	1.431	1.00
519_I	600_I	1.430	1.00
467_K	728_Y	1.422	1.00
409_N	412_S	1.418	1.00
610_S	631_R	1.413	1.00
601_T	634_K	1.405	1.00
565_K	569_K	1.399	1.00
458_T	493_R	1.392	1.00
529_E	592_R	1.387	1.00
547_S	551_T	1.386	1.00
220_H	319_M	1.382	1.00
328_I	362_M	1.381	1.00
519_I	630_L	1.380	1.00
285_E	302_E	1.379	1.00
446_V	726_H	1.373	1.00
486_G	686_G	1.372	1.00
172_M	343_Y	1.368	1.00
232_S	330_R	1.368	1.00
226_I	323_C	1.367	1.00
515_I	629_D	1.363	1.00
493_R	497_S	1.354	1.00
251_I	271_L	1.354	1.00
233_A	326_L	1.354	1.00
576_F	580_K	1.353	1.00
349_F	357_Y	1.350	1.00
464_I	666_V	1.334	1.00
395_Q	403_T	1.330	1.00
479_V	490_I	1.324	1.00
458_T	497_S	1.323	1.00
595_K	598_E	1.323	1.00
530_D	562_T	1.309	1.00
258_E	303_H	1.306	1.00
642_T	645_D	1.301	1.00
146_E	402_K	1.298	1.00
550_N	554_A	1.294	1.00
324_Y	359_I	1.290	1.00
414_H	440_D	1.287	1.00
393_D	396_K	1.285	1.00
326_L	333_L	1.281	1.00
305_E	308_K	1.278	1.00
450_P	730_S	1.275	1.00
423_V	716_L	1.271	1.00
296_Q	299_R	1.271	1.00
527_Q	644_P	1.267	1.00
184_L	341_F	1.266	1.00
255_L	260_I	1.258	1.00
472_A	680_K	1.257	1.00
526_S	603_A	1.253	1.00
277_W	287_I	1.252	1.00
235_W	314_F	1.247	1.00
173_I	204_Y	1.242	1.00
226_I	337_Y	1.240	1.00
304_Y	315_D	1.234	1.00
716_L	720_M	1.233	1.00
379_S	382_A	1.232	1.00
597_V	641_K	1.232	1.00
138_T	142_K	1.231	1.00
169_A	200_M	1.230	1.00
575_P	578_L	1.229	1.00
493_R	496_Q	1.229	1.00
561_C	566_A	1.226	1.00
279_N	317_D	1.225	1.00
139_D	407_T	1.222	1.00
157_A	421_D	1.217	1.00
561_C	569_K	1.213	1.00
253_K	307_Q	1.212	1.00
467_K	726_H	1.207	1.00
168_R	371_C	1.205	1.00
611_E	615_K	1.205	1.00
449_Y	733_A	1.202	1.00
582_K	586_P	1.198	1.00
610_S	614_K	1.196	1.00
464_I	474_P	1.193	1.00
337_Y	341_F	1.186	1.00
324_Y	362_M	1.168	1.00
133_S	141_L	1.166	1.00
138_T	141_L	1.166	1.00
226_I	326_L	1.164	1.00
198_E	202_N	1.158	1.00
247_R	271_L	1.155	1.00
452_D	455_E	1.153	1.00
282_V	287_I	1.152	1.00
352_I	390_F	1.142	1.00
338_Q	366_P	1.139	1.00
395_Q	431_Y	1.138	1.00
418_S	441_D	1.138	1.00
420_A	721_T	1.138	1.00
415_P	445_P	1.137	1.00
376_D	433_K	1.137	1.00
343_Y	369_N	1.136	1.00
524_Y	651_D	1.135	1.00
530_D	565_K	1.134	1.00
393_D	397_D	1.133	1.00
250_Y	307_Q	1.131	1.00
636_V	646_F	1.129	1.00
616_R	623_L	1.128	1.00
502_T	665_G	1.123	1.00
597_V	638_K	1.122	1.00
324_Y	328_I	1.121	1.00
223_F	359_I	1.120	1.00
456_E	686_G	1.117	1.00
200_M	216_T	1.114	1.00
152_L	372_C	1.112	1.00
147_T	172_M	1.112	1.00
152_L	403_T	1.107	1.00
308_K	318_D	1.105	1.00
222_L	337_Y	1.103	1.00
474_P	477_F	1.100	1.00
248_E	267_V	1.094	1.00
525_A	535_I	1.092	1.00
569_K	572_D	1.091	1.00
468_I	473_S	1.090	1.00
591_L	606_K	1.087	1.00
254_A	300_L	1.085	1.00
232_S	332_D	1.083	1.00
629_D	633_I	1.082	1.00
608_G	611_E	1.081	1.00
552_L	563_M	1.078	1.00
632_D	635_V	1.077	1.00
589_A	592_R	1.077	1.00
460_V	683_Y	1.077	1.00
324_Y	358_K	1.076	1.00
463_D	467_K	1.073	1.00
446_V	463_D	1.069	1.00
146_E	149_G	1.069	1.00
694_H	697_S	1.068	1.00
229_H	340_R	1.065	1.00
154_L	376_D	1.059	1.00
477_F	681_T	1.058	1.00
524_Y	534_A	1.058	1.00
194_A	197_K	1.058	1.00
194_A	198_E	1.055	1.00
627_S	631_R	1.054	1.00
576_F	579_D	1.053	1.00
461_V	493_R	1.052	1.00
451_Y	733_A	1.049	1.00
305_E	309_K	1.049	1.00
472_A	476_D	1.047	1.00
142_K	145_T	1.045	1.00
417_V	435_L	1.042	1.00
270_A	297_V	1.038	1.00
681_T	725_Q	1.036	1.00
562_T	565_K	1.035	1.00
277_W	297_V	1.031	1.00
521_A	537_H	1.031	1.00
584_I	588_F	1.021	1.00
465_K	468_I	1.021	1.00
424_V	427_N	1.020	1.00
488_R	492_E	1.020	1.00
247_R	304_Y	1.018	1.00
671_I	684_V	1.016	1.00
443_Q	446_V	1.014	1.00
555_L	559_E	1.009	1.00
519_I	633_I	1.007	1.00
339_S	366_P	1.007	1.00
349_F	372_C	1.005	1.00
587_F	591_L	1.001	1.00
248_E	268_D	0.998	1.00
166_T	200_M	0.997	1.00
465_K	474_P	0.996	1.00
491_Y	501_Y	0.993	1.00
574_K	577_Q	0.989	1.00
251_I	274_I	0.988	1.00
309_K	322_A	0.988	1.00
149_G	402_K	0.987	1.00
320_A	359_I	0.986	1.00
591_L	603_A	0.986	1.00
420_A	720_M	0.984	1.00
147_T	343_Y	0.983	1.00
633_I	636_V	0.982	1.00
538_L	584_I	0.981	1.00
678_E	724_K	0.981	1.00
354_P	358_K	0.980	1.00
361_Q	398_Y	0.979	1.00
233_A	330_R	0.977	1.00
705_D	708_A	0.976	1.00
477_F	683_Y	0.975	1.00
277_W	282_V	0.973	1.00
150_P	368_Q	0.972	1.00
461_V	499_I	0.971	1.00
554_A	558_T	0.971	1.00
415_P	441_D	0.971	1.00
448_F	459_M	0.967	1.00
134_V	141_L	0.963	1.00
474_P	499_I	0.962	1.00
459_M	463_D	0.961	1.00
348_E	675_K	0.956	0.99
522_Y	603_A	0.956	0.99
453_E	489_A	0.955	0.99
244_E	247_R	0.951	0.99
168_R	369_N	0.946	0.99
520_L	650_V	0.945	0.99
323_C	327_F	0.941	0.99
685_L	730_S	0.938	0.99
148_E	343_Y	0.936	0.99
669_M	674_S	0.935	0.99
258_E	299_R	0.934	0.99
281_Y	321_S	0.933	0.99
579_D	583_K	0.932	0.99
568_A	585_V	0.930	0.99
555_L	569_K	0.929	0.99
345_L	371_C	0.929	0.99
660_R	663_E	0.928	0.99
455_E	458_T	0.926	0.99
483_T	486_G	0.925	0.99
143_A	153_V	0.924	0.99
509_S	512_S	0.924	0.99
555_L	566_A	0.923	0.99
178_I	182_N	0.923	0.99
335_E	366_P	0.922	0.99
693_P	712_E	0.921	0.99
618_N	622_K	0.921	0.99
481_Y	685_L	0.921	0.99
231_N	237_G	0.920	0.99
522_Y	538_L	0.916	0.99
377_D	424_V	0.910	0.99
253_K	536_K	0.909	0.99
502_T	667_Q	0.909	0.99
559_E	569_K	0.908	0.99
595_K	641_K	0.908	0.99
165_L	345_L	0.907	0.99
253_K	257_E	0.905	0.99
484_N	487_G	0.904	0.99
299_R	302_E	0.903	0.99
227_L	323_C	0.902	0.99
464_I	683_Y	0.901	0.99
458_T	462_S	0.900	0.99
637_A	641_K	0.900	0.99
382_A	707_A	0.898	0.99
451_Y	455_E	0.896	0.99
145_T	175_H	0.894	0.99
153_V	345_L	0.891	0.99
376_D	405_Y	0.889	0.99
282_V	286_R	0.888	0.99
461_V	666_V	0.886	0.99
364_A	370_L	0.886	0.99
692_I	695_D	0.884	0.99
709_L	744_R	0.883	0.99
272_Q	276_F	0.882	0.99
342_T	367_E	0.880	0.99
590_S	594_M	0.879	0.99
515_I	626_G	0.877	0.99
546_Q	550_N	0.877	0.99
414_H	441_D	0.876	0.99
460_V	730_S	0.873	0.99
181_E	213_R	0.872	0.99
224_Y	319_M	0.861	0.99
625_K	629_D	0.860	0.99
590_S	602_F	0.859	0.99
519_I	604_E	0.859	0.99
139_D	436_E	0.859	0.99
275_G	279_N	0.858	0.99
478_A	679_F	0.858	0.99
600_I	633_I	0.857	0.99
273_Q	297_V	0.854	0.99
273_Q	277_W	0.852	0.99
205_G	211_V	0.851	0.99
626_G	633_I	0.851	0.99
461_V	465_K	0.850	0.99
640_F	646_F	0.849	0.99
169_A	183_M	0.849	0.99
215_V	225_K	0.845	0.99
629_D	637_A	0.844	0.99
585_V	589_A	0.844	0.99
463_D	726_H	0.839	0.99
516_V	633_I	0.838	0.99
688_V	735_R	0.837	0.99
413_T	416_I	0.837	0.99
244_E	271_L	0.837	0.99
459_M	728_Y	0.836	0.99
427_N	748_P	0.836	0.99
284_N	301_Y	0.835	0.99
523_L	600_I	0.834	0.99
526_S	591_L	0.834	0.99
465_K	469_Q	0.833	0.99
632_D	636_V	0.833	0.99
150_P	369_N	0.831	0.99
526_S	599_A	0.830	0.99
173_I	214_I	0.829	0.99
360_M	370_L	0.829	0.99
518_Q	609_F	0.827	0.99
644_P	648_A	0.827	0.99
224_Y	228_Y	0.824	0.98
255_L	270_A	0.824	0.98
191_K	195_E	0.824	0.98
625_K	628_D	0.823	0.98
323_C	359_I	0.822	0.98
186_V	222_L	0.822	0.98
414_H	437_A	0.821	0.98
242_K	308_K	0.820	0.98
278_K	301_Y	0.820	0.98
539_L	544_L	0.820	0.98
604_E	634_K	0.819	0.98
690_G	695_D	0.818	0.98
276_F	280_T	0.814	0.98
547_S	550_N	0.814	0.98
217_G	221_S	0.814	0.98
583_K	586_P	0.813	0.98
688_V	732_P	0.813	0.98
381_Y	384_R	0.813	0.98
412_S	416_I	0.811	0.98
447_L	746_L	0.811	0.98
135_G	167_A	0.811	0.98
305_E	322_A	0.810	0.98
251_I	267_V	0.808	0.98
224_Y	241_L	0.807	0.98
407_T	436_E	0.805	0.98
425_K	432_A	0.805	0.98
683_Y	730_S	0.804	0.98
601_T	605_G	0.804	0.98
415_P	418_S	0.804	0.98
742_R	747_Y	0.802	0.98
225_K	229_H	0.802	0.98
487_G	668_L	0.802	0.98
461_V	494_L	0.800	0.98
274_I	301_Y	0.798	0.98
171_H	176_L	0.798	0.98
324_Y	355_V	0.797	0.98
168_R	343_Y	0.796	0.98
274_I	278_K	0.794	0.98
504_D	673_R	0.793	0.98
605_G	610_S	0.793	0.98
528_N	531_D	0.792	0.98
466_E	470_N	0.790	0.98
684_V	716_L	0.788	0.98
667_Q	679_F	0.787	0.98
468_I	472_A	0.785	0.98
261_D	264_E	0.779	0.98
524_Y	531_D	0.779	0.98
147_T	171_H	0.778	0.98
687_T	692_I	0.777	0.98
240_L	246_Q	0.777	0.98
575_P	579_D	0.777	0.98
419_S	749_L	0.774	0.98
587_F	590_S	0.774	0.98
422_I	749_L	0.773	0.98
623_L	629_D	0.773	0.98
415_P	444_V	0.766	0.98
143_A	371_C	0.764	0.98
518_Q	521_A	0.763	0.98
729_L	746_L	0.763	0.98
336_Q	340_R	0.763	0.98
571_P	582_K	0.760	0.97
604_E	610_S	0.760	0.97
629_D	632_D	0.759	0.97
512_S	517_R	0.759	0.97
629_D	636_V	0.758	0.97
298_Y	302_E	0.758	0.97
567_L	585_V	0.758	0.97
154_L	391_I	0.756	0.97
577_Q	580_K	0.755	0.97
427_N	713_R	0.754	0.97
386_S	390_F	0.753	0.97
573_L	577_Q	0.753	0.97
197_K	201_A	0.752	0.97
433_K	437_A	0.751	0.97
339_S	367_E	0.751	0.97
522_Y	542_L	0.751	0.97
321_S	355_V	0.749	0.97
229_H	336_Q	0.748	0.97
377_D	433_K	0.748	0.97
565_K	568_A	0.748	0.97
379_S	383_F	0.746	0.97
287_I	298_Y	0.743	0.97
494_L	666_V	0.739	0.97
414_H	439_R	0.738	0.97
278_K	318_D	0.737	0.97
352_I	386_S	0.737	0.97
462_S	466_E	0.735	0.97
545_K	548_A	0.733	0.97
349_F	391_I	0.732	0.97
174_E	210_K	0.732	0.97
457_A	490_I	0.731	0.97
581_I	585_V	0.730	0.97
407_T	434_T	0.730	0.97
144_V	164_V	0.729	0.97
599_A	603_A	0.727	0.97
720_M	729_L	0.727	0.97
422_I	425_K	0.727	0.97
187_T	192_A	0.724	0.97
418_S	422_I	0.724	0.97
467_K	470_N	0.723	0.97
494_L	501_Y	0.721	0.96
561_C	565_K	0.719	0.96
649_H	653_M	0.719	0.96
532_T	563_M	0.718	0.96
600_I	634_K	0.718	0.96
280_T	387_N	0.717	0.96
618_N	623_L	0.717	0.96
623_L	626_G	0.716	0.96
188_F	348_E	0.713	0.96
136_L	163_R	0.712	0.96
320_A	324_Y	0.711	0.96
146_E	369_N	0.711	0.96
233_A	322_A	0.710	0.96
692_I	696_F	0.710	0.96
475_E	665_G	0.710	0.96
167_A	171_H	0.709	0.96
147_T	369_N	0.709	0.96
635_V	638_K	0.708	0.96
474_P	664_H	0.707	0.96
457_A	461_V	0.707	0.96
520_L	633_I	0.706	0.96
731_C	742_R	0.705	0.96
168_R	345_L	0.705	0.96
446_V	728_Y	0.704	0.96
564_I	589_A	0.704	0.96
146_E	168_R	0.702	0.96
650_V	653_M	0.702	0.96
379_S	386_S	0.701	0.96
628_D	631_R	0.701	0.96
338_Q	367_E	0.701	0.96
586_P	590_S	0.700	0.96
690_G	693_P	0.700	0.96
693_P	696_F	0.699	0.96
220_H	320_A	0.697	0.96
597_V	634_K	0.696	0.96
622_K	626_G	0.694	0.96
623_L	627_S	0.692	0.96
427_N	430_R	0.692	0.96
153_V	404_I	0.690	0.96
430_R	433_K	0.690	0.96
147_T	176_L	0.689	0.95
299_R	303_H	0.688	0.95
734_N	737_G	0.685	0.95
139_D	404_I	0.684	0.95
578_L	582_K	0.684	0.95
457_A	686_G	0.684	0.95
691_S	740_A	0.683	0.95
452_D	734_N	0.683	0.95
635_V	639_K	0.681	0.95
150_P	398_Y	0.680	0.95
166_T	203_Q	0.678	0.95
482_R	715_L	0.677	0.95
523_L	599_A	0.674	0.95
454_E	493_R	0.674	0.95
710_E	713_R	0.673	0.95
146_E	150_P	0.672	0.95
295_K	299_R	0.672	0.95
388_P	391_I	0.671	0.95
564_I	585_V	0.671	0.95
220_H	315_D	0.670	0.95
372_C	394_F	0.668	0.95
464_I	494_L	0.668	0.95
188_F	675_K	0.667	0.95
293_W	297_V	0.664	0.94
327_F	337_Y	0.664	0.94
349_F	352_I	0.664	0.94
341_F	344_I	0.664	0.94
227_L	233_A	0.663	0.94
548_A	580_K	0.663	0.94
483_T	694_H	0.663	0.94
637_A	640_F	0.661	0.94
346_I	372_C	0.661	0.94
573_L	578_L	0.660	0.94
348_E	351_D	0.658	0.94
588_F	591_L	0.658	0.94
148_E	369_N	0.657	0.94
597_V	601_T	0.657	0.94
270_A	300_L	0.657	0.94
215_V	340_R	0.656	0.94
239_H	319_M	0.656	0.94
266_P	269_Q	0.656	0.94
358_K	362_M	0.656	0.94
567_L	581_I	0.655	0.94
674_S	679_F	0.652	0.94
694_H	698_L	0.652	0.94
622_K	629_D	0.651	0.94
474_P	666_V	0.651	0.94
274_I	300_L	0.650	0.94
457_A	489_A	0.648	0.94
522_Y	540_P	0.648	0.94
156_G	159_S	0.648	0.94
226_I	230_S	0.647	0.94
357_Y	361_Q	0.646	0.94
712_E	743_S	0.646	0.94
148_E	176_L	0.645	0.94
454_E	489_A	0.645	0.94
236_N	530_D	0.645	0.94
602_F	605_G	0.643	0.93
489_A	493_R	0.643	0.93
719_A	729_L	0.643	0.93
614_K	627_S	0.643	0.93
504_D	665_G	0.643	0.93
408_A	437_A	0.642	0.93
647_L	651_D	0.642	0.93
135_G	163_R	0.641	0.93
133_S	145_T	0.641	0.93
491_Y	495_H	0.638	0.93
596_P	599_A	0.638	0.93
523_L	643_I	0.637	0.93
284_N	305_E	0.636	0.93
519_I	609_F	0.635	0.93
591_L	599_A	0.635	0.93
425_K	434_T	0.635	0.93
417_V	420_A	0.635	0.93
732_P	735_R	0.634	0.93
220_H	672_H	0.634	0.93
155_A	348_E	0.633	0.93
527_Q	643_I	0.633	0.93
579_D	582_K	0.633	0.93
251_I	270_A	0.633	0.93
640_F	649_H	0.632	0.93
251_I	255_L	0.631	0.93
525_A	564_I	0.631	0.93
270_A	274_I	0.630	0.93
492_E	496_Q	0.630	0.93
564_I	568_A	0.629	0.93
413_T	725_Q	0.627	0.93
374_G	391_I	0.627	0.93
449_Y	742_R	0.627	0.93
394_F	398_Y	0.627	0.93
548_A	581_I	0.626	0.93
305_E	321_S	0.626	0.93
155_A	351_D	0.625	0.93
243_M	246_Q	0.625	0.93
597_V	637_A	0.624	0.92
646_F	650_V	0.621	0.92
693_P	743_S	0.620	0.92
488_R	632_D	0.619	0.92
532_T	562_T	0.619	0.92
510_F	516_V	0.618	0.92
468_I	476_D	0.618	0.92
627_S	630_L	0.617	0.92
143_A	404_I	0.617	0.92
448_F	728_Y	0.617	0.92
479_V	668_L	0.616	0.92
630_L	634_K	0.614	0.92
152_L	391_I	0.614	0.92
378_Q	718_V	0.614	0.92
159_S	417_V	0.613	0.92
354_P	393_D	0.613	0.92
283_P	287_I	0.611	0.92
626_G	632_D	0.610	0.92
365_S	368_Q	0.609	0.92
589_A	593_T	0.609	0.92
594_M	606_K	0.608	0.91
143_A	164_V	0.608	0.91
429_N	710_E	0.607	0.91
490_I	494_L	0.607	0.91
474_P	680_K	0.606	0.91
745_F	748_P	0.605	0.91
163_R	724_K	0.605	0.91
427_N	433_K	0.605	0.91
704_G	708_A	0.604	0.91
244_E	248_E	0.604	0.91
491_Y	668_L	0.604	0.91
548_A	577_Q	0.603	0.91
539_L	549_L	0.603	0.91
172_M	345_L	0.603	0.91
588_F	592_R	0.602	0.91
174_E	177_G	0.601	0.91
283_P	325_E	0.601	0.91
477_F	680_K	0.600	0.91
675_K	718_V	0.600	0.91
235_W	309_K	0.600	0.91
133_S	167_A	0.600	0.91
220_H	227_L	0.599	0.91
223_F	346_I	0.598	0.91
157_A	417_V	0.598	0.91
490_I	668_L	0.597	0.91
626_G	630_L	0.597	0.91
351_D	675_K	0.597	0.91
523_L	527_Q	0.597	0.91
290_K	293_W	0.596	0.91
370_L	394_F	0.596	0.91
718_V	721_T	0.596	0.91
539_L	542_L	0.596	0.91
263_K	266_P	0.595	0.91
137_N	417_V	0.594	0.91
201_A	212_R	0.594	0.91
486_G	691_S	0.594	0.91
283_P	321_S	0.594	0.91
171_H	174_E	0.594	0.91
717_Y	721_T	0.594	0.91
222_L	225_K	0.592	0.90
220_H	317_D	0.592	0.90
468_I	666_V	0.592	0.90
539_L	567_L	0.592	0.90
186_V	360_M	0.592	0.90
255_L	267_V	0.588	0.90
392_L	395_Q	0.588	0.90
163_R	199_R	0.587	0.90
170_A	204_Y	0.585	0.90
684_V	687_T	0.585	0.90
173_I	183_M	0.585	0.90
591_L	602_F	0.585	0.90
219_F	349_F	0.585	0.90
521_A	534_A	0.584	0.90
227_L	326_L	0.583	0.90
378_Q	672_H	0.583	0.90
374_G	378_Q	0.582	0.90
155_A	675_K	0.581	0.90
629_D	640_F	0.581	0.90
276_F	279_N	0.580	0.89
362_M	365_S	0.579	0.89
544_L	548_A	0.579	0.89
718_V	722_R	0.578	0.89
168_R	178_I	0.578	0.89
574_K	578_L	0.578	0.89
416_I	420_A	0.577	0.89
587_F	606_K	0.576	0.89
388_P	392_L	0.575	0.89
522_Y	541_A	0.573	0.89
563_M	566_A	0.572	0.89
142_K	404_I	0.572	0.89
173_I	180_P	0.570	0.89
447_L	742_R	0.568	0.88
598_E	601_T	0.567	0.88
220_H	314_F	0.567	0.88
520_L	524_Y	0.566	0.88
596_P	600_I	0.564	0.88
518_Q	540_P	0.564	0.88
269_Q	272_Q	0.564	0.88
470_N	726_H	0.563	0.88
146_E	371_C	0.561	0.88
633_I	639_K	0.561	0.88
163_R	166_T	0.561	0.88
484_N	670_T	0.560	0.88
618_N	621_N	0.559	0.88
289_L	294_E	0.559	0.88
351_D	378_Q	0.559	0.88
201_A	211_V	0.559	0.88
251_I	254_A	0.558	0.88
655_A	658_K	0.558	0.88
219_F	352_I	0.557	0.88
348_E	356_Q	0.556	0.87
580_K	583_K	0.556	0.87
656_A	659_N	0.556	0.87
168_R	172_M	0.554	0.87
434_T	437_A	0.554	0.87
240_L	313_Q	0.554	0.87
246_Q	313_Q	0.553	0.87
196_M	216_T	0.553	0.87
542_L	545_K	0.553	0.87
206_L	210_K	0.551	0.87
166_T	170_A	0.551	0.87
350_Q	374_G	0.550	0.87
543_F	576_F	0.549	0.87
307_Q	313_Q	0.549	0.87
248_E	271_L	0.549	0.87
415_P	442_I	0.548	0.87
468_I	664_H	0.548	0.87
184_L	222_L	0.547	0.87
186_V	352_I	0.547	0.87
155_A	378_Q	0.546	0.86
477_F	666_V	0.545	0.86
689_D	709_L	0.545	0.86
517_R	521_A	0.545	0.86
720_M	749_L	0.544	0.86
233_A	314_F	0.543	0.86
549_L	563_M	0.543	0.86
551_T	554_A	0.543	0.86
517_R	537_H	0.542	0.86
457_A	493_R	0.542	0.86
157_A	717_Y	0.541	0.86
223_F	324_Y	0.541	0.86
586_P	589_A	0.541	0.86
371_C	679_F	0.541	0.86
481_Y	490_I	0.541	0.86
185_L	196_M	0.540	0.86
352_I	356_Q	0.539	0.86
413_T	442_I	0.538	0.86
381_Y	675_K	0.538	0.86
471_G	477_F	0.538	0.86
350_Q	378_Q	0.538	0.86
411_R	678_E	0.537	0.86
172_M	176_L	0.536	0.85
553_K	563_M	0.536	0.85
142_K	146_E	0.536	0.85
583_K	606_K	0.535	0.85
146_E	172_M	0.535	0.85
241_L	319_M	0.535	0.85
631_R	634_K	0.535	0.85
325_E	328_I	0.535	0.85
713_R	745_F	0.534	0.85
412_S	417_V	0.534	0.85
152_L	349_F	0.534	0.85
625_K	637_A	0.534	0.85
697_S	708_A	0.534	0.85
205_G	210_K	0.533	0.85
243_M	517_R	0.532	0.85
526_S	588_F	0.531	0.85
258_E	270_A	0.531	0.85
220_H	378_Q	0.529	0.85
301_Y	305_E	0.528	0.85
157_A	692_I	0.528	0.85
612_Y	615_K	0.528	0.85
246_Q	517_R	0.528	0.85
578_L	585_V	0.527	0.85
273_Q	294_E	0.526	0.84
650_V	654_R	0.525	0.84
175_H	178_I	0.525	0.84
421_D	720_M	0.524	0.84
356_Q	675_K	0.524	0.84
273_Q	276_F	0.524	0.84
536_K	549_L	0.523	0.84
281_Y	358_K	0.523	0.84
605_G	611_E	0.522	0.84
532_T	556_S	0.521	0.84
601_T	631_R	0.521	0.84
170_A	174_E	0.521	0.84
204_Y	210_K	0.521	0.84
617_G	622_K	0.521	0.84
356_Q	672_H	0.521	0.84
692_I	716_L	0.521	0.84
157_A	377_D	0.519	0.84
364_A	367_E	0.516	0.83
351_D	718_V	0.516	0.83
490_I	493_R	0.516	0.83
415_P	439_R	0.516	0.83
257_E	557_I	0.515	0.83
265_S	270_A	0.515	0.83
150_P	370_L	0.514	0.83
631_R	635_V	0.514	0.83
625_K	632_D	0.513	0.83
631_R	638_K	0.512	0.83
348_E	375_D	0.512	0.83
156_G	349_F	0.511	0.83
155_A	188_F	0.511	0.83
420_A	423_V	0.511	0.83
480_L	717_Y	0.510	0.83
591_L	607_M	0.510	0.83
245_W	249_Q	0.510	0.83
348_E	718_V	0.510	0.83
318_D	322_A	0.510	0.83
290_K	294_E	0.509	0.82
274_I	284_N	0.509	0.82
645_D	648_A	0.508	0.82
459_M	683_Y	0.508	0.82
186_V	190_T	0.508	0.82
169_A	345_L	0.507	0.82
672_H	675_K	0.507	0.82
574_K	580_K	0.506	0.82
188_F	356_Q	0.506	0.82
375_D	378_Q	0.506	0.82
150_P	401_A	0.506	0.82
549_L	553_K	0.506	0.82
230_S	333_L	0.506	0.82
254_A	257_E	0.505	0.82
624_E	628_D	0.505	0.82
166_T	196_M	0.505	0.82
170_A	200_M	0.504	0.82
280_T	354_P	0.504	0.82
222_L	341_F	0.504	0.82
136_L	167_A	0.503	0.82
333_L	336_Q	0.503	0.82
552_L	585_V	0.503	0.82
427_N	710_E	0.503	0.82
668_L	685_L	0.502	0.82
146_E	404_I	0.502	0.82
377_D	427_N	0.502	0.82
344_I	363_L	0.502	0.82
609_F	612_Y	0.502	0.82
626_G	637_A	0.501	0.81
185_L	222_L	0.501	0.81
423_V	749_L	0.500	0.81
356_Q	373_V	0.500	0.81
626_G	636_V	0.500	0.81

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4c2tA	1	0.8169	100	0.253	Contact Map
1pjrA	1	0.7945	100	0.255	Contact Map
1uaaA	2	0.805	100	0.325	Contact Map
3u4qA	1	0.8063	100	0.338	Contact Map
4c2uA	1	0.8129	100	0.346	Contact Map
3lfuA	1	0.8076	100	0.347	Contact Map
1w36B	1	0.7879	100	0.39	Contact Map
3u4qB	1	0.7642	100	0.475	Contact Map
4pj3A	1	0.6877	100	0.634	Contact Map
2gk6A	1	0.6904	100	0.704	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0161 seconds.