YFIU - BACSU - GREMLIN Contacts

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YFIU - Uncharacterized MFS-type transporter YfiU

UniProt:	O31563	Sequences: MSEALTEQKSQKWAISLFTIGVFMAALDNGIISAALTTINESFSVSPSWGSWGITLYTLGLSVSVPIVGKLSDRYGRKKLFLIEVCLFGLGSLLVALSQSFPLFLISRLIQALGGGGIFIIGSSHILATLPKEKQGKALGLLGAMNGMAAVLGPNIGSFLLDWTGSWHWLFLINLPIAVLLVVFGACFIAETKAPEAKRLDAAGIFLLSLSILAVMYGMTNLDGANLLHSLGNPEVYGCIIFGILCFAALISYEKRVEMRGGDPILAYSLLRNHMFQRTLIIGLLSGGLLAAVIFIPSYVEQYLGVPAAKAGYWMTPLALASGIGAWLGGALTDKKGPVKTVILSGIISCAGFALFPLWVTEKWEFVIASVAAGIGFGFLLGAPLNVLVSEAAKTNKGTALGTLSLVRQIGLTLAPTLYAGFITAGFDQIGDEINSRLSDSGYSEKAMQMIPEIDSSEVSSLQEQIERIPVPEVKTAISDAIHASVASGYDHLYAAAAVVSLLVIAAISIPAFRRQKR	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	518 (407)
Sequences:	29961 (20240)
Seq/√Len:	1003.2

ECOLI - EMRB EMRY MDTD YEBQ HSRA NANT
BACSU - YFIU BMR3 YHCA YUSP LMRB YUBD YCNB TCRB MMR YVKA YWOD
SULSO - Q97VC8 Q97YH0 Q97U91 Q97Y15 Q97WR9 Q97X47 Q97VB9 Q97YY8

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
99_Q	103_L	5.077	1.00
89_G	178_A	4.492	1.00
87_L	114_G	3.669	1.00
96_A	172_L	3.542	1.00
211_S	247_F	3.262	1.00
94_L	107_S	3.211	1.00
207_L	253_Y	3.041	1.00
102_P	106_I	2.974	1.00
392_A	400_A	2.832	1.00
355_L	369_A	2.708	1.00
269_S	396_N	2.699	1.00
56_L	109_L	2.687	1.00
100_S	103_L	2.563	1.00
218_G	240_I	2.552	1.00
77_R	128_A	2.502	1.00
210_L	246_C	2.493	1.00
325_G	375_I	2.472	1.00
203_A	253_Y	2.467	1.00
321_A	371_V	2.388	1.00
215_V	243_G	2.358	1.00
45_V	101_F	2.309	1.00
82_L	186_A	2.277	1.00
201_D	204_G	2.206	1.00
248_A	252_S	2.147	1.00
64_S	113_L	2.146	1.00
95_V	107_S	2.139	1.00
60_G	109_L	2.105	1.00
307_P	310_K	2.096	1.00
267_A	396_N	2.087	1.00
183_V	187_C	2.073	1.00
393_A	396_N	2.072	1.00
82_L	182_V	2.067	1.00
134_K	137_K	2.054	1.00
185_G	189_I	2.054	1.00
91_G	114_G	2.049	1.00
35_A	161_L	1.990	1.00
237_Y	241_I	1.956	1.00
352_G	373_A	1.945	1.00
160_L	169_W	1.905	1.00
103_L	107_S	1.895	1.00
91_G	110_I	1.895	1.00
164_T	169_W	1.842	1.00
250_L	254_E	1.831	1.00
84_E	117_G	1.817	1.00
284_L	411_G	1.814	1.00
211_S	243_G	1.803	1.00
222_L	231_L	1.789	1.00
301_E	311_A	1.773	1.00
299_Y	304_L	1.773	1.00
21_G	81_F	1.769	1.00
166_S	169_W	1.755	1.00
46_S	49_W	1.730	1.00
68_V	117_G	1.694	1.00
91_G	107_S	1.685	1.00
19_T	145_M	1.685	1.00
199_R	263_D	1.668	1.00
214_A	239_C	1.667	1.00
93_L	97_L	1.665	1.00
12_K	134_K	1.654	1.00
362_E	365_E	1.648	1.00
73_D	398_G	1.627	1.00
49_W	101_F	1.619	1.00
291_A	419_Y	1.614	1.00
45_V	49_W	1.587	1.00
290_L	412_L	1.584	1.00
238_G	242_F	1.574	1.00
23_F	149_A	1.572	1.00
331_A	335_K	1.569	1.00
130_L	138_A	1.566	1.00
261_G	264_P	1.560	1.00
162_D	309_A	1.560	1.00
251_I	255_K	1.557	1.00
14_A	129_T	1.555	1.00
92_S	174_N	1.552	1.00
63_V	209_S	1.540	1.00
56_L	105_L	1.527	1.00
218_G	243_G	1.524	1.00
78_K	82_L	1.520	1.00
82_L	185_G	1.517	1.00
214_A	246_C	1.516	1.00
306_V	314_W	1.516	1.00
101_F	105_L	1.515	1.00
38_T	41_E	1.508	1.00
234_P	238_G	1.502	1.00
163_W	166_S	1.499	1.00
79_K	191_E	1.499	1.00
211_S	246_C	1.491	1.00
132_K	135_Q	1.463	1.00
271_L	277_Q	1.441	1.00
136_G	334_D	1.435	1.00
131_P	134_K	1.435	1.00
95_V	104_F	1.433	1.00
363_K	367_V	1.431	1.00
352_G	376_G	1.430	1.00
221_N	229_H	1.428	1.00
255_K	269_S	1.426	1.00
98_S	107_S	1.419	1.00
279_T	388_L	1.418	1.00
310_K	313_Y	1.413	1.00
348_I	376_G	1.413	1.00
86_C	182_V	1.406	1.00
35_A	170_L	1.401	1.00
70_K	74_R	1.395	1.00
207_L	246_C	1.388	1.00
127_L	135_Q	1.387	1.00
350_C	354_A	1.384	1.00
28_D	31_I	1.379	1.00
214_A	242_F	1.379	1.00
93_L	175_L	1.365	1.00
71_L	80_L	1.354	1.00
53_G	104_F	1.351	1.00
98_S	103_L	1.349	1.00
72_S	77_R	1.346	1.00
243_G	247_F	1.336	1.00
159_F	163_W	1.330	1.00
83_I	87_L	1.327	1.00
306_V	310_K	1.324	1.00
352_G	369_A	1.321	1.00
202_A	206_F	1.317	1.00
217_Y	221_N	1.317	1.00
31_I	170_L	1.312	1.00
17_L	184_F	1.306	1.00
72_S	121_I	1.305	1.00
184_F	188_F	1.297	1.00
64_S	116_G	1.294	1.00
242_F	246_C	1.291	1.00
364_W	368_I	1.285	1.00
251_I	268_Y	1.284	1.00
40_N	50_G	1.280	1.00
17_L	188_F	1.278	1.00
19_T	141_L	1.269	1.00
194_A	197_A	1.264	1.00
253_Y	261_G	1.260	1.00
57_Y	115_G	1.260	1.00
277_Q	281_I	1.246	1.00
94_L	103_L	1.241	1.00
347_I	351_A	1.238	1.00
158_S	308_A	1.233	1.00
310_K	314_W	1.231	1.00
204_G	253_Y	1.230	1.00
162_D	307_P	1.230	1.00
345_S	379_F	1.226	1.00
267_A	399_T	1.223	1.00
15_I	130_L	1.223	1.00
90_L	94_L	1.215	1.00
218_G	236_V	1.214	1.00
89_G	182_V	1.207	1.00
207_L	249_A	1.202	1.00
102_P	105_L	1.202	1.00
318_L	374_G	1.202	1.00
81_F	185_G	1.199	1.00
331_A	334_D	1.198	1.00
300_V	314_W	1.196	1.00
252_S	255_K	1.191	1.00
60_G	112_A	1.190	1.00
321_A	325_G	1.186	1.00
325_G	378_G	1.181	1.00
17_L	181_L	1.177	1.00
179_V	183_V	1.176	1.00
229_H	235_E	1.175	1.00
337_G	340_K	1.166	1.00
85_V	181_L	1.161	1.00
82_L	86_C	1.154	1.00
67_I	205_I	1.151	1.00
210_L	214_A	1.146	1.00
352_G	372_A	1.145	1.00
364_W	367_V	1.145	1.00
345_S	380_L	1.135	1.00
273_N	277_Q	1.134	1.00
216_M	413_T	1.128	1.00
20_I	181_L	1.127	1.00
169_W	176_P	1.127	1.00
99_Q	102_P	1.127	1.00
26_A	146_N	1.123	1.00
28_D	174_N	1.120	1.00
24_M	178_A	1.119	1.00
354_A	358_L	1.113	1.00
29_N	58_T	1.108	1.00
97_L	172_L	1.107	1.00
89_G	93_L	1.100	1.00
330_G	334_D	1.100	1.00
329_G	379_F	1.099	1.00
354_A	357_P	1.080	1.00
274_H	278_R	1.078	1.00
221_N	228_L	1.077	1.00
344_L	379_F	1.075	1.00
332_L	336_K	1.069	1.00
340_K	343_I	1.068	1.00
133_E	137_K	1.067	1.00
365_E	369_A	1.060	1.00
368_I	371_V	1.060	1.00
55_T	220_T	1.057	1.00
349_S	376_G	1.052	1.00
126_I	142_L	1.046	1.00
244_I	248_A	1.045	1.00
280_L	407_V	1.044	1.00
247_F	251_I	1.040	1.00
31_I	157_G	1.038	1.00
229_H	236_V	1.034	1.00
218_G	239_C	1.034	1.00
127_L	397_K	1.030	1.00
249_A	252_S	1.025	1.00
76_G	79_K	1.021	1.00
273_N	393_A	1.020	1.00
286_S	380_L	1.019	1.00
240_I	244_I	1.014	1.00
229_H	233_N	1.009	1.00
95_V	171_F	1.008	1.00
266_L	403_T	1.005	1.00
355_L	358_L	1.000	1.00
276_F	280_L	1.000	1.00
79_K	83_I	0.996	1.00
89_G	175_L	0.995	1.00
87_L	91_G	0.994	1.00
235_E	238_G	0.994	1.00
52_W	56_L	0.990	1.00
276_F	400_A	0.988	1.00
273_N	396_N	0.986	1.00
156_I	159_F	0.980	1.00
187_C	190_A	0.980	1.00
274_H	277_Q	0.980	1.00
122_G	142_L	0.979	1.00
295_F	420_A	0.978	1.00
358_L	369_A	0.977	1.00
78_K	186_A	0.976	1.00
56_L	60_G	0.970	1.00
80_L	117_G	0.970	1.00
103_L	106_I	0.969	1.00
168_H	172_L	0.967	1.00
71_L	75_Y	0.967	1.00
206_F	210_L	0.966	1.00
94_L	97_L	0.965	1.00
184_F	187_C	0.963	1.00
198_K	263_D	0.961	1.00
361_T	365_E	0.958	1.00
314_W	363_K	0.954	1.00
255_K	268_Y	0.953	1.00
422_F	426_G	0.950	1.00
200_L	205_I	0.949	1.00
300_V	366_F	0.949	1.00
365_E	368_I	0.940	1.00
32_I	53_G	0.935	1.00
77_R	191_E	0.933	1.00
66_P	208_L	0.931	1.00
136_G	330_G	0.931	1.00
318_L	373_A	0.929	1.00
106_I	109_L	0.924	1.00
38_T	42_S	0.923	1.00
160_L	164_T	0.921	1.00
325_G	329_G	0.921	1.00
325_G	379_F	0.919	1.00
275_M	391_E	0.918	1.00
80_L	83_I	0.917	1.00
388_L	404_L	0.917	1.00
280_L	403_T	0.913	1.00
235_E	239_C	0.911	1.00
269_S	272_R	0.909	1.00
301_E	308_A	0.909	1.00
249_A	253_Y	0.908	1.00
248_A	251_I	0.908	1.00
175_L	179_V	0.908	1.00
327_W	331_A	0.906	1.00
328_L	331_A	0.905	1.00
205_I	209_S	0.905	1.00
73_D	77_R	0.904	1.00
199_R	262_G	0.902	1.00
345_S	376_G	0.901	1.00
84_E	114_G	0.901	1.00
128_A	397_K	0.900	1.00
232_G	237_Y	0.897	1.00
25_A	118_I	0.896	1.00
182_V	186_A	0.895	1.00
160_L	173_I	0.893	1.00
97_L	107_S	0.889	1.00
69_G	73_D	0.886	1.00
245_L	249_A	0.880	1.00
33_S	54_I	0.879	1.00
284_L	407_V	0.879	1.00
54_I	294_I	0.876	1.00
204_G	254_E	0.872	1.00
356_F	359_W	0.872	1.00
320_L	324_I	0.869	1.00
60_G	64_S	0.869	1.00
212_I	406_L	0.867	1.00
411_G	415_A	0.866	1.00
339_V	343_I	0.866	1.00
344_L	348_I	0.865	1.00
73_D	399_T	0.863	1.00
325_G	328_L	0.862	1.00
99_Q	107_S	0.860	1.00
63_V	213_L	0.860	1.00
191_E	194_A	0.860	1.00
136_G	140_G	0.858	1.00
45_V	50_G	0.858	1.00
231_L	236_V	0.854	1.00
159_F	309_A	0.852	1.00
273_N	391_E	0.849	1.00
53_G	101_F	0.845	1.00
163_W	309_A	0.841	1.00
368_I	372_A	0.841	1.00
83_I	86_C	0.839	1.00
214_A	243_G	0.834	1.00
283_G	404_L	0.832	1.00
211_S	251_I	0.831	1.00
343_I	347_I	0.829	1.00
300_V	304_L	0.825	1.00
244_I	247_F	0.824	1.00
209_S	213_L	0.824	1.00
367_V	371_V	0.823	1.00
284_L	414_L	0.821	1.00
329_G	378_G	0.820	1.00
272_R	277_Q	0.818	1.00
336_K	341_T	0.816	1.00
77_R	124_S	0.815	1.00
358_L	365_E	0.814	1.00
36_L	50_G	0.814	1.00
18_F	122_G	0.812	1.00
353_F	373_A	0.809	1.00
359_W	369_A	0.808	1.00
313_Y	317_P	0.808	1.00
212_I	410_I	0.807	1.00
346_G	380_L	0.805	1.00
125_H	129_T	0.802	1.00
21_G	85_V	0.797	1.00
210_L	242_F	0.796	1.00
162_D	308_A	0.794	1.00
93_L	172_L	0.790	1.00
353_F	357_P	0.789	1.00
49_W	102_P	0.787	1.00
91_G	94_L	0.786	1.00
22_V	146_N	0.785	1.00
385_L	404_L	0.778	1.00
106_I	110_I	0.778	1.00
39_I	104_F	0.777	1.00
205_I	265_I	0.776	1.00
124_S	398_G	0.774	1.00
39_I	50_G	0.774	1.00
348_I	372_A	0.770	1.00
78_K	191_E	0.770	1.00
210_L	213_L	0.770	1.00
217_Y	239_C	0.769	1.00
85_V	182_V	0.766	1.00
79_K	82_L	0.765	1.00
17_L	185_G	0.765	1.00
357_P	360_V	0.765	1.00
86_C	90_L	0.763	1.00
99_Q	168_H	0.761	1.00
298_S	302_Q	0.760	1.00
26_A	149_A	0.760	1.00
43_F	101_F	0.757	1.00
208_L	265_I	0.757	1.00
27_L	31_I	0.756	1.00
241_I	245_L	0.751	1.00
144_A	148_M	0.750	1.00
300_V	306_V	0.749	1.00
193_K	196_E	0.749	1.00
232_G	235_E	0.747	1.00
343_I	346_G	0.745	1.00
236_V	239_C	0.743	1.00
157_G	161_L	0.743	1.00
351_A	354_A	0.741	1.00
336_K	340_K	0.741	1.00
94_L	110_I	0.740	1.00
72_S	124_S	0.739	1.00
153_G	157_G	0.737	1.00
333_T	383_A	0.736	1.00
355_L	365_E	0.734	1.00
203_A	207_L	0.734	1.00
89_G	179_V	0.733	1.00
176_P	180_L	0.732	1.00
240_I	243_G	0.729	1.00
21_G	118_I	0.728	1.00
58_T	413_T	0.727	1.00
242_F	249_A	0.727	1.00
123_S	142_L	0.727	1.00
276_F	388_L	0.726	1.00
317_P	321_A	0.723	1.00
389_V	401_L	0.722	1.00
69_G	402_G	0.717	1.00
39_I	43_F	0.711	1.00
180_L	184_F	0.710	1.00
203_A	206_F	0.710	1.00
233_N	237_Y	0.709	1.00
75_Y	80_L	0.708	1.00
154_P	312_G	0.708	1.00
176_P	179_V	0.707	1.00
72_S	398_G	0.706	1.00
58_T	412_L	0.705	1.00
238_G	241_I	0.702	1.00
340_K	344_L	0.701	1.00
347_I	350_C	0.701	1.00
297_P	311_A	0.700	1.00
211_S	214_A	0.699	1.00
219_M	222_L	0.699	1.00
35_A	39_I	0.698	1.00
183_V	186_A	0.698	1.00
147_G	322_S	0.697	1.00
151_V	319_A	0.696	1.00
379_F	383_A	0.694	1.00
137_K	331_A	0.694	1.00
108_R	111_Q	0.694	1.00
23_F	145_M	0.692	1.00
146_N	150_A	0.692	1.00
233_N	236_V	0.691	1.00
341_T	344_L	0.689	1.00
62_S	410_I	0.688	1.00
321_A	375_I	0.687	1.00
63_V	205_I	0.687	1.00
405_S	408_R	0.686	1.00
200_L	204_G	0.685	1.00
294_I	416_P	0.683	1.00
52_W	59_L	0.682	1.00
271_L	276_F	0.681	1.00
126_I	138_A	0.680	1.00
344_L	347_I	0.680	1.00
169_W	172_L	0.679	1.00
36_L	54_I	0.679	1.00
11_Q	134_K	0.677	1.00
296_I	370_S	0.674	1.00
333_T	386_N	0.674	1.00
255_K	272_R	0.674	1.00
386_N	390_S	0.673	1.00
152_L	156_I	0.673	1.00
158_S	312_G	0.670	1.00
233_N	238_G	0.669	1.00
337_G	341_T	0.667	1.00
61_L	409_Q	0.666	1.00
140_G	144_A	0.665	1.00
374_G	378_G	0.664	1.00
313_Y	316_T	0.663	1.00
306_V	363_K	0.663	1.00
124_S	401_L	0.662	1.00
68_V	84_E	0.661	1.00
328_L	332_L	0.661	1.00
203_A	261_G	0.661	1.00
223_D	230_S	0.661	1.00
208_L	212_I	0.660	1.00
295_F	423_I	0.657	1.00
61_L	115_G	0.657	1.00
127_L	139_L	0.656	1.00
314_W	317_P	0.656	1.00
50_G	53_G	0.655	1.00
282_I	346_G	0.655	1.00
418_L	421_G	0.654	1.00
275_M	387_V	0.654	1.00
14_A	17_L	0.654	1.00
351_A	355_L	0.652	1.00
207_L	250_L	0.652	1.00
60_G	113_L	0.652	1.00
282_I	384_P	0.649	1.00
161_L	166_S	0.646	1.00
348_I	375_I	0.646	1.00
13_W	16_S	0.644	1.00
250_L	266_L	0.642	1.00
234_P	237_Y	0.639	1.00
346_G	350_C	0.636	1.00
31_I	173_I	0.635	1.00
77_R	192_T	0.631	1.00
95_V	98_S	0.630	1.00
18_F	129_T	0.630	1.00
62_S	413_T	0.630	1.00
277_Q	280_L	0.630	1.00
62_S	409_Q	0.630	1.00
280_L	404_L	0.630	1.00
92_S	111_Q	0.629	1.00
69_G	121_I	0.629	1.00
421_G	425_A	0.628	1.00
221_N	236_V	0.627	1.00
12_K	130_L	0.626	1.00
74_R	199_R	0.625	1.00
204_G	261_G	0.623	1.00
34_A	311_A	0.621	1.00
137_K	141_L	0.620	1.00
362_E	367_V	0.619	1.00
152_L	155_N	0.618	1.00
324_I	327_W	0.618	1.00
139_L	143_G	0.617	1.00
68_V	120_I	0.612	1.00
32_I	95_V	0.611	1.00
60_G	114_G	0.611	1.00
186_A	190_A	0.610	1.00
39_I	42_S	0.610	1.00
270_L	276_F	0.610	1.00
289_L	377_F	0.608	1.00
149_A	153_G	0.606	1.00
332_L	341_T	0.604	1.00
211_S	215_V	0.604	1.00
85_V	178_A	0.604	1.00
143_G	147_G	0.604	1.00
275_M	278_R	0.603	1.00
87_L	113_L	0.603	1.00
133_E	136_G	0.601	1.00
97_L	103_L	0.601	1.00
130_L	134_K	0.600	1.00
39_I	161_L	0.599	1.00
42_S	168_H	0.598	1.00
290_L	293_V	0.597	1.00
221_N	235_E	0.596	1.00
155_N	313_Y	0.594	1.00
296_I	300_V	0.593	1.00
309_A	313_Y	0.591	1.00
161_L	170_L	0.590	1.00
223_D	228_L	0.590	1.00
70_K	263_D	0.589	1.00
326_A	330_G	0.587	1.00
349_S	352_G	0.587	1.00
50_G	298_S	0.586	1.00
318_L	370_S	0.586	1.00
30_G	150_A	0.585	1.00
15_I	126_I	0.585	1.00
24_M	174_N	0.583	1.00
95_V	111_Q	0.583	1.00
397_K	401_L	0.583	1.00
148_M	152_L	0.579	1.00
128_A	192_T	0.578	1.00
77_R	125_H	0.577	1.00
24_M	85_V	0.576	1.00
40_N	46_S	0.575	1.00
231_L	237_Y	0.574	1.00
172_L	176_P	0.571	1.00
41_E	44_S	0.568	1.00
64_S	67_I	0.568	1.00
107_S	110_I	0.567	1.00
230_S	233_N	0.566	1.00
307_P	311_A	0.563	1.00
97_L	168_H	0.562	1.00
402_G	406_L	0.561	1.00
246_C	249_A	0.561	1.00
96_A	168_H	0.560	1.00
213_L	217_Y	0.560	1.00
271_L	403_T	0.560	1.00
208_L	250_L	0.559	1.00
57_Y	108_R	0.558	1.00
174_N	178_A	0.555	1.00
38_T	301_E	0.555	1.00
55_T	420_A	0.555	1.00
283_G	287_G	0.554	1.00
314_W	367_V	0.554	1.00
201_D	253_Y	0.553	1.00
183_V	188_F	0.552	1.00
283_G	384_P	0.552	1.00
255_K	262_G	0.551	1.00
139_L	386_N	0.550	1.00
275_M	279_T	0.549	1.00
75_Y	200_L	0.549	1.00
75_Y	79_K	0.547	1.00
133_E	334_D	0.545	1.00
73_D	76_G	0.544	1.00
126_I	129_T	0.544	1.00
299_Y	303_Y	0.544	1.00
380_L	384_P	0.544	1.00
417_T	421_G	0.544	1.00
371_V	375_I	0.543	1.00
57_Y	88_F	0.542	1.00
23_F	27_L	0.542	1.00
149_A	154_P	0.542	1.00
92_S	175_L	0.541	1.00
316_T	319_A	0.539	1.00
292_A	373_A	0.537	1.00
83_I	117_G	0.537	1.00
40_N	45_V	0.537	1.00
29_N	408_R	0.536	1.00
161_L	164_T	0.535	1.00
28_D	173_I	0.534	1.00
30_G	153_G	0.534	1.00
199_R	203_A	0.534	1.00
33_S	294_I	0.534	1.00
278_R	281_I	0.533	1.00
251_I	254_E	0.532	1.00
321_A	367_V	0.532	1.00
88_F	114_G	0.532	1.00
147_G	326_A	0.531	1.00
281_I	285_L	0.531	1.00
333_T	337_G	0.526	1.00
12_K	16_S	0.525	1.00
51_S	220_T	0.525	1.00
65_V	409_Q	0.525	1.00
137_K	334_D	0.524	1.00
254_E	265_I	0.524	1.00
15_I	138_A	0.523	1.00
356_F	369_A	0.523	1.00
287_G	408_R	0.521	1.00
339_V	342_V	0.521	1.00
342_V	384_P	0.521	1.00
217_Y	229_H	0.519	1.00
32_I	54_I	0.516	1.00
145_M	149_A	0.515	1.00
211_S	248_A	0.514	1.00
192_T	195_P	0.513	1.00
236_V	240_I	0.511	1.00
78_K	190_A	0.509	1.00
65_V	405_S	0.509	1.00
70_K	205_I	0.508	1.00
222_L	236_V	0.508	1.00
123_S	401_L	0.508	1.00
421_G	424_T	0.507	1.00
172_L	175_L	0.506	1.00
356_F	370_S	0.505	1.00
366_F	370_S	0.505	1.00
394_K	397_K	0.504	1.00
270_L	273_N	0.503	1.00
241_I	244_I	0.503	1.00
161_L	308_A	0.503	1.00
80_L	121_I	0.503	1.00
26_A	150_A	0.502	1.00
318_L	321_A	0.501	1.00
151_V	316_T	0.501	1.00
215_V	219_M	0.501	1.00
367_V	370_S	0.500	1.00
243_G	248_A	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1pw4A	1	0.7741	100	0.511	Contact Map
4j05A	3	0.7104	100	0.536	Contact Map
3wdoA	1	0.7529	100	0.538	Contact Map
4xnjA	1	0.8301	100	0.538	Contact Map
4pypA	1	0.7741	100	0.539	Contact Map
2gfpA	2	0.7143	100	0.543	Contact Map
4tphA	2	0.8089	100	0.549	Contact Map
3o7qA	1	0.7394	100	0.549	Contact Map
4w6vA	1	0.834	100	0.556	Contact Map
4gc0A	1	0.8089	100	0.559	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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