YDCI - BACSU - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

YDCI - Uncharacterized protein YdcI

UniProt:	O31489	Sequences: METSALLKQQIAKEIGLSQKHVESVIRLLEDGNTVPFIARYRKEQTGSMDEVQIQTISERWQYIQNLNQRKEEVIRLIAEQDKLTDNLKRKIEQSVKLQEVEDLYRPYKQKRKTKATVAKSKGLEPLADYILTLPQDDHLAATADQYISEEKEVFTREEAIEGAKHIIAEQISDEPTFRKWIRQETFKRGTIKSAAGKSADTDEKNVYEMYYEYEEPIAKVVPHRVLAMNRGEKEDILKVAIEPPADHIKAYLEKQIIKNRSTSVREILQETIEDSYKRLIQPAIEREIRKELSEKADEQAIHIFSENLRKLLLQPPMKGKTVLGVDPAFRTGCKLAVSDETGKVLKIDVIYPHAPVNKTKEAHEKVKKILEQYQVEMVAIGNGTASRETEQFIVNVLRDMPRKIYYVIVNEAGASVYSASELAREEFPDLKVEERSAVSIARRLQDPLAELVKIDPKSVGVGQYQHDVSQKRLNESLRFVVETVVNQVGVNVNTASAALLQYVAGLSKSVAGNVVKKREEIGKFSNRKELKDIPRLGAKTYEQCIGFLRVQEGTEPLDRTGIHPESYKETKALLKKLGLSTEHIGTAELKDKINQLALSETAKELGIGEITLKDICEQLTRPERDPRDKVPKPLLKTDVLQLEDLKEGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNQFVKHPLDVVSVGDIVTVWVDGVDVQKGRVSLSMVK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	719 (704)
Sequences:	2774 (1642)
Seq/√Len:	61.9

ECOLI - YHGF
BACSU - YDCI

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
359_K	362_E	5.980	1.00
154_V	160_A	4.787	1.00
156_T	159_E	4.388	1.00
232_G	238_L	4.248	1.00
143_T	146_Q	4.146	1.00
529_K	532_K	4.130	1.00
325_G	442_A	4.009	1.00
339_S	442_A	3.936	1.00
79_A	89_K	3.768	1.00
364_H	400_D	3.534	1.00
299_E	473_R	3.511	1.00
74_V	101_V	3.437	1.00
89_K	93_E	3.274	1.00
129_D	171_Q	3.185	1.00
86_D	89_K	3.164	1.00
527_N	555_T	3.106	1.00
14_E	60_R	3.104	1.00
194_S	229_M	3.019	1.00
556_E	572_K	3.010	1.00
27_R	31_D	2.968	1.00
598_A	601_E	2.968	1.00
125_E	129_D	2.955	1.00
165_K	268_I	2.937	1.00
165_K	271_E	2.915	1.00
681_L	693_V	2.879	1.00
526_S	530_E	2.860	1.00
644_E	708_V	2.801	1.00
577_K	602_T	2.796	1.00
348_I	435_E	2.788	1.00
155_F	159_E	2.781	1.00
52_V	425_R	2.705	1.00
651_E	702_W	2.690	1.00
577_K	605_E	2.648	1.00
221_V	229_M	2.633	1.00
681_L	686_V	2.615	1.00
143_T	147_Y	2.567	1.00
113_K	118_V	2.541	1.00
355_A	358_N	2.530	1.00
254_E	270_Q	2.476	1.00
676_V	717_M	2.470	1.00
367_V	394_I	2.460	1.00
456_D	459_S	2.447	1.00
18_S	21_H	2.407	1.00
229_M	240_V	2.361	1.00
347_K	373_Q	2.348	1.00
600_S	610_E	2.330	1.00
30_E	65_Q	2.327	1.00
422_E	426_E	2.312	1.00
139_H	142_A	2.291	1.00
90_R	94_Q	2.286	1.00
115_K	166_H	2.272	1.00
513_G	517_K	2.247	1.00
369_K	373_Q	2.202	1.00
508_S	511_V	2.184	1.00
233_E	290_R	2.173	1.00
141_A	157_R	2.153	1.00
599_L	613_L	2.151	1.00
82_D	86_D	2.136	1.00
168_I	172_I	2.121	1.00
195_A	213_E	2.102	1.00
351_I	363_A	2.073	1.00
322_T	376_V	2.067	1.00
8_K	26_I	2.066	1.00
704_D	714_S	2.061	1.00
189_R	248_H	2.060	1.00
60_R	64_I	2.051	1.00
216_E	225_R	2.037	1.00
275_D	279_R	2.036	1.00
142_A	145_D	2.027	1.00
321_K	377_E	2.011	1.00
96_V	100_E	2.006	1.00
326_V	390_T	2.000	1.00
113_K	121_S	1.989	1.00
21_H	49_M	1.974	1.00
651_E	700_T	1.970	1.00
324_L	338_V	1.959	1.00
71_K	101_V	1.952	1.00
648_E	705_G	1.949	1.00
75_I	84_L	1.946	1.00
187_F	292_E	1.945	1.00
25_V	54_I	1.944	1.00
113_K	117_T	1.943	1.00
88_L	104_L	1.934	1.00
76_R	80_E	1.910	1.00
479_R	503_Y	1.888	1.00
688_H	691_D	1.867	1.00
517_K	521_E	1.861	1.00
100_E	180_K	1.851	1.00
581_S	584_H	1.845	1.00
493_V	531_L	1.845	1.00
132_L	171_Q	1.844	1.00
322_T	341_E	1.810	1.00
684_Q	691_D	1.789	1.00
599_L	617_C	1.778	1.00
48_S	611_I	1.775	1.00
527_N	530_E	1.769	0.99
23_E	27_R	1.746	0.99
79_A	82_D	1.743	0.99
349_D	366_K	1.740	0.99
338_V	376_V	1.736	0.99
705_G	714_S	1.736	0.99
526_S	555_T	1.727	0.99
551_V	554_G	1.724	0.99
680_K	716_S	1.722	0.99
78_I	83_K	1.717	0.99
178_F	253_L	1.704	0.99
354_H	360_T	1.701	0.99
570_E	608_I	1.699	0.99
193_K	243_E	1.697	0.99
162_E	166_H	1.693	0.99
26_I	61_W	1.682	0.99
567_S	570_E	1.678	0.99
39_A	54_I	1.673	0.99
182_I	249_I	1.666	0.99
106_R	174_D	1.664	0.99
340_D	344_K	1.661	0.99
160_A	164_A	1.655	0.99
574_L	613_L	1.651	0.99
184_Q	188_K	1.649	0.99
653_Q	700_T	1.639	0.99
149_S	153_E	1.632	0.99
214_Y	221_V	1.632	0.99
371_L	405_I	1.629	0.99
130_Y	143_T	1.625	0.99
61_W	65_Q	1.622	0.99
344_K	520_E	1.622	0.99
345_V	348_I	1.617	0.99
608_I	613_L	1.607	0.99
198_K	201_D	1.600	0.99
186_T	282_Q	1.598	0.99
365_E	369_K	1.589	0.99
76_R	79_A	1.588	0.99
518_K	522_I	1.587	0.99
122_K	153_E	1.581	0.99
88_L	92_I	1.566	0.99
125_E	171_Q	1.563	0.99
580_L	590_L	1.559	0.99
666_V	676_V	1.558	0.99
324_L	376_V	1.556	0.99
307_E	690_L	1.547	0.99
185_E	189_R	1.546	0.99
381_I	394_I	1.545	0.99
357_V	362_E	1.530	0.98
158_E	162_E	1.528	0.98
686_V	691_D	1.527	0.98
192_I	229_M	1.523	0.98
643_L	713_V	1.513	0.98
687_K	691_D	1.511	0.98
276_S	281_I	1.510	0.98
603_A	610_E	1.509	0.98
58_S	62_Q	1.502	0.98
672_Q	713_V	1.501	0.98
336_L	390_T	1.497	0.98
372_E	403_R	1.489	0.98
188_K	219_A	1.481	0.98
610_E	614_K	1.474	0.98
364_H	393_F	1.467	0.98
150_E	155_F	1.465	0.98
306_S	477_S	1.463	0.98
410_V	445_L	1.453	0.98
380_A	410_V	1.447	0.98
79_A	84_L	1.442	0.98
294_S	298_D	1.442	0.98
82_D	89_K	1.438	0.98
473_R	476_E	1.437	0.98
161_I	165_K	1.436	0.98
29_L	58_S	1.417	0.98
127_L	160_A	1.414	0.97
702_W	716_S	1.412	0.97
540_K	543_E	1.412	0.97
54_I	57_I	1.409	0.97
311_K	659_V	1.408	0.97
398_L	403_R	1.405	0.97
91_K	100_E	1.403	0.97
680_K	704_D	1.401	0.97
275_D	280_L	1.394	0.97
124_L	160_A	1.393	0.97
326_V	334_C	1.389	0.97
572_K	576_K	1.388	0.97
254_E	274_E	1.379	0.97
10_Q	96_V	1.378	0.97
670_V	713_V	1.369	0.97
205_K	237_I	1.368	0.97
141_A	158_E	1.368	0.97
200_A	204_E	1.366	0.97
75_I	92_I	1.362	0.97
68_N	72_E	1.358	0.97
567_S	608_I	1.356	0.97
332_T	350_V	1.354	0.97
360_T	393_F	1.350	0.97
353_P	356_P	1.350	0.97
347_K	374_Y	1.347	0.97
345_V	431_L	1.341	0.97
556_E	582_T	1.335	0.96
214_Y	229_M	1.332	0.96
302_I	469_V	1.331	0.96
148_I	157_R	1.322	0.96
116_A	120_K	1.321	0.96
577_K	601_E	1.321	0.96
686_V	692_V	1.318	0.96
345_V	428_F	1.310	0.96
75_I	89_K	1.310	0.96
361_K	365_E	1.306	0.96
522_I	533_D	1.305	0.96
518_K	530_E	1.304	0.96
387_S	409_I	1.302	0.96
532_K	539_A	1.300	0.96
191_T	215_E	1.299	0.96
217_P	220_K	1.292	0.96
182_I	285_I	1.291	0.96
425_R	428_F	1.291	0.96
569_K	572_K	1.290	0.96
398_L	405_I	1.289	0.96
300_Q	303_H	1.288	0.96
69_Q	72_E	1.287	0.96
194_S	238_L	1.285	0.96
192_I	221_V	1.284	0.96
323_V	339_S	1.283	0.96
75_I	93_E	1.282	0.95
230_N	290_R	1.281	0.95
122_K	155_F	1.278	0.95
356_P	359_K	1.272	0.95
326_V	394_I	1.271	0.95
130_Y	138_D	1.269	0.95
431_L	439_V	1.263	0.95
178_F	257_I	1.261	0.95
221_V	226_V	1.259	0.95
9_Q	19_Q	1.259	0.95
704_D	716_S	1.258	0.95
222_V	225_R	1.253	0.95
29_L	54_I	1.252	0.95
35_V	54_I	1.249	0.95
206_N	209_E	1.246	0.95
154_V	164_A	1.245	0.95
330_F	671_K	1.237	0.95
573_A	576_K	1.236	0.94
250_K	253_L	1.235	0.94
206_N	237_I	1.231	0.94
122_K	154_V	1.216	0.94
29_L	35_V	1.215	0.94
310_R	484_T	1.213	0.94
664_A	693_V	1.205	0.94
11_I	22_V	1.205	0.94
580_L	584_H	1.201	0.94
140_L	264_S	1.196	0.93
129_D	133_T	1.195	0.93
643_L	708_V	1.194	0.93
595_N	621_T	1.190	0.93
49_M	57_I	1.187	0.93
518_K	533_D	1.182	0.93
325_G	339_S	1.181	0.93
292_E	295_E	1.180	0.93
651_E	716_S	1.178	0.93
681_L	717_M	1.172	0.93
196_A	200_A	1.171	0.93
277_Y	282_Q	1.169	0.93
326_V	336_L	1.168	0.93
524_K	553_E	1.166	0.93
573_A	604_K	1.162	0.92
145_D	157_R	1.161	0.92
78_I	92_I	1.159	0.92
218_I	289_I	1.158	0.92
161_I	268_I	1.156	0.92
682_S	686_V	1.154	0.92
601_E	605_E	1.153	0.92
186_T	277_Y	1.152	0.92
562_G	619_Q	1.150	0.92
643_L	711_G	1.146	0.92
510_S	514_N	1.145	0.92
208_Y	235_E	1.144	0.92
668_I	713_V	1.143	0.92
417_V	459_S	1.140	0.92
75_I	79_A	1.139	0.92
269_L	272_T	1.139	0.92
345_V	439_V	1.139	0.92
97_K	100_E	1.137	0.92
122_K	159_E	1.132	0.91
51_E	484_T	1.129	0.91
17_L	22_V	1.129	0.91
182_I	281_I	1.129	0.91
70_R	102_E	1.126	0.91
324_L	336_L	1.124	0.91
175_E	178_F	1.119	0.91
492_N	552_Q	1.119	0.91
367_V	397_V	1.118	0.91
366_K	369_K	1.114	0.91
642_Q	671_K	1.113	0.91
542_Y	546_I	1.112	0.91
120_K	125_E	1.112	0.91
124_L	154_V	1.112	0.91
354_H	393_F	1.111	0.91
532_K	542_Y	1.109	0.91
31_D	45_Q	1.104	0.90
230_N	294_S	1.103	0.90
249_I	253_L	1.102	0.90
676_V	699_V	1.101	0.90
498_A	513_G	1.098	0.90
77_L	110_Q	1.097	0.90
193_K	215_E	1.097	0.90
19_Q	23_E	1.097	0.90
189_R	245_P	1.096	0.90
250_K	254_E	1.096	0.90
130_Y	147_Y	1.089	0.90
138_D	143_T	1.086	0.90
426_E	513_G	1.084	0.90
131_I	265_V	1.083	0.89
95_S	101_V	1.083	0.89
10_Q	13_K	1.078	0.89
356_P	360_T	1.075	0.89
258_I	273_I	1.074	0.89
680_K	702_W	1.073	0.89
120_K	171_Q	1.071	0.89
24_S	45_Q	1.070	0.89
78_I	81_Q	1.069	0.89
194_S	232_G	1.069	0.89
570_E	607_G	1.069	0.89
14_E	64_I	1.066	0.89
186_T	285_I	1.063	0.89
404_K	638_T	1.061	0.89
683_N	702_W	1.061	0.89
223_P	300_Q	1.060	0.88
379_V	405_I	1.059	0.88
298_D	470_S	1.059	0.88
681_L	692_V	1.058	0.88
169_A	275_D	1.057	0.88
186_T	244_P	1.051	0.88
150_E	153_E	1.050	0.88
181_W	252_Y	1.049	0.88
302_I	473_R	1.048	0.88
103_D	183_R	1.046	0.88
148_I	154_V	1.043	0.88
135_P	138_D	1.043	0.88
323_V	446_Q	1.042	0.88
190_G	289_I	1.041	0.88
310_R	488_Q	1.034	0.87
434_E	437_S	1.026	0.87
363_A	393_F	1.026	0.87
517_K	535_P	1.026	0.87
395_V	407_Y	1.025	0.87
12_A	17_L	1.023	0.87
245_P	248_H	1.022	0.87
367_V	371_L	1.019	0.86
131_I	268_I	1.018	0.86
140_L	268_I	1.014	0.86
172_I	276_S	1.009	0.86
17_L	25_V	1.004	0.86
578_L	590_L	1.003	0.86
517_K	520_E	1.003	0.86
9_Q	13_K	1.003	0.86
338_V	370_I	1.000	0.85
336_L	349_D	0.999	0.85
378_M	445_L	0.998	0.85
197_G	236_D	0.995	0.85
169_A	279_R	0.994	0.85
12_A	22_V	0.994	0.85
257_I	273_I	0.992	0.85
177_T	256_Q	0.991	0.85
268_I	271_E	0.989	0.85
226_V	293_L	0.989	0.85
7_L	68_N	0.988	0.85
25_V	49_M	0.985	0.84
24_S	27_R	0.984	0.84
310_R	314_L	0.983	0.84
303_H	307_E	0.980	0.84
604_K	607_G	0.980	0.84
368_K	372_E	0.979	0.84
172_I	273_I	0.978	0.84
347_K	370_I	0.977	0.84
62_Q	476_E	0.977	0.84
537_L	541_T	0.976	0.84
292_E	296_K	0.976	0.84
530_E	533_D	0.975	0.84
169_A	280_L	0.972	0.84
273_I	276_S	0.971	0.84
648_E	704_D	0.970	0.84
11_I	15_I	0.966	0.83
574_L	617_C	0.965	0.83
201_D	205_K	0.965	0.83
205_K	212_Y	0.964	0.83
648_E	651_E	0.962	0.83
422_E	425_R	0.960	0.83
267_E	270_Q	0.958	0.83
180_K	184_Q	0.957	0.83
55_Q	59_E	0.957	0.83
140_L	144_A	0.955	0.83
13_K	16_G	0.955	0.83
206_N	212_Y	0.955	0.83
78_I	82_D	0.953	0.82
588_A	621_T	0.951	0.82
361_K	364_H	0.950	0.82
348_I	434_E	0.949	0.82
529_K	555_T	0.948	0.82
392_Q	396_N	0.948	0.82
370_I	374_Y	0.948	0.82
391_E	407_Y	0.946	0.82
330_F	354_H	0.944	0.82
127_L	161_I	0.944	0.82
699_V	717_M	0.940	0.82
360_T	364_H	0.937	0.81
364_H	368_K	0.936	0.81
364_H	397_V	0.934	0.81
131_I	164_A	0.930	0.81
341_E	524_K	0.928	0.81
648_E	706_V	0.927	0.81
197_G	239_K	0.927	0.81
50_D	425_R	0.927	0.81
329_A	336_L	0.925	0.81
580_L	587_T	0.924	0.80
349_D	370_I	0.923	0.80
475_N	479_R	0.923	0.80
676_V	716_S	0.922	0.80
8_K	23_E	0.921	0.80
88_L	108_Y	0.919	0.80
364_H	396_N	0.917	0.80
571_T	578_L	0.917	0.80
52_V	422_E	0.914	0.80
349_D	373_Q	0.911	0.80
597_L	602_T	0.909	0.79
120_K	166_H	0.909	0.79
569_K	573_A	0.906	0.79
535_P	539_A	0.902	0.79
190_G	218_I	0.902	0.79
351_I	354_H	0.901	0.79
371_L	398_L	0.901	0.79
379_V	394_I	0.899	0.79
634_P	653_Q	0.899	0.79
341_E	377_E	0.898	0.79
636_L	655_T	0.897	0.78
172_I	178_F	0.897	0.78
73_E	77_L	0.895	0.78
117_T	120_K	0.894	0.78
166_H	169_A	0.893	0.78
368_K	401_M	0.890	0.78
401_M	405_I	0.890	0.78
599_L	610_E	0.889	0.78
102_E	109_K	0.887	0.78
159_E	162_E	0.884	0.77
200_A	237_I	0.883	0.77
345_V	349_D	0.881	0.77
587_T	590_L	0.880	0.77
81_Q	110_Q	0.880	0.77
350_V	437_S	0.878	0.77
73_E	76_R	0.877	0.77
350_V	431_L	0.877	0.77
493_V	539_A	0.877	0.77
233_E	279_R	0.877	0.77
640_V	652_L	0.876	0.77
195_A	239_K	0.875	0.77
635_L	638_T	0.874	0.77
267_E	271_E	0.871	0.76
707_D	710_K	0.871	0.76
210_M	225_R	0.870	0.76
258_I	269_L	0.869	0.76
594_I	617_C	0.868	0.76
670_V	673_D	0.868	0.76
11_I	17_L	0.866	0.76
218_I	293_L	0.863	0.76
165_K	272_T	0.862	0.76
322_T	377_E	0.861	0.76
60_R	63_Y	0.861	0.76
304_I	661_D	0.860	0.75
118_V	121_S	0.858	0.75
263_T	266_R	0.858	0.75
431_L	435_E	0.856	0.75
657_R	673_D	0.851	0.75
57_I	61_W	0.847	0.74
215_E	243_E	0.847	0.74
510_S	536_R	0.845	0.74
522_I	530_E	0.844	0.74
84_L	89_K	0.843	0.74
168_I	171_Q	0.841	0.74
71_K	95_S	0.840	0.74
44_E	612_T	0.839	0.74
78_I	109_K	0.839	0.74
223_P	301_A	0.838	0.74
378_M	406_Y	0.837	0.74
51_E	57_I	0.836	0.73
26_I	30_E	0.836	0.73
380_A	445_L	0.836	0.73
183_R	288_E	0.835	0.73
203_D	709_Q	0.833	0.73
311_K	690_L	0.833	0.73
71_K	92_I	0.831	0.73
472_K	476_E	0.829	0.73
510_S	513_G	0.829	0.73
116_A	166_H	0.828	0.73
54_I	425_R	0.828	0.73
253_L	257_I	0.828	0.73
428_F	443_R	0.828	0.73
161_I	164_A	0.827	0.73
226_V	230_N	0.827	0.73
252_Y	256_Q	0.826	0.73
175_E	256_Q	0.823	0.72
614_K	618_E	0.823	0.72
272_T	276_S	0.822	0.72
187_F	296_K	0.819	0.72
166_H	280_L	0.818	0.72
149_S	154_V	0.816	0.72
571_T	574_L	0.816	0.72
298_D	473_R	0.815	0.72
68_N	71_K	0.815	0.72
371_L	401_M	0.812	0.71
154_V	159_E	0.812	0.71
26_I	65_Q	0.807	0.71
567_S	607_G	0.806	0.71
291_K	295_E	0.803	0.70
659_V	695_V	0.800	0.70
266_R	270_Q	0.799	0.70
420_A	433_V	0.799	0.70
214_Y	224_H	0.797	0.70
144_A	157_R	0.797	0.70
67_L	74_V	0.796	0.70
320_G	492_N	0.795	0.70
362_E	366_K	0.795	0.70
69_Q	73_E	0.794	0.70
253_L	273_I	0.794	0.70
199_S	205_K	0.792	0.69
56_T	59_E	0.788	0.69
408_V	631_V	0.788	0.69
399_R	639_D	0.786	0.69
250_K	257_I	0.786	0.69
617_C	621_T	0.784	0.69
246_A	278_K	0.783	0.68
529_K	572_K	0.782	0.68
70_R	109_K	0.781	0.68
44_E	611_I	0.780	0.68
362_E	365_E	0.780	0.68
115_K	118_V	0.779	0.68
329_A	332_T	0.779	0.68
705_G	709_Q	0.778	0.68
17_L	49_M	0.777	0.68
567_S	571_T	0.777	0.68
250_K	277_Y	0.777	0.68
348_I	431_L	0.776	0.68
640_V	650_M	0.776	0.68
242_I	289_I	0.776	0.68
656_V	693_V	0.773	0.67
307_E	694_S	0.772	0.67
283_P	287_R	0.771	0.67
367_V	393_F	0.771	0.67
139_H	264_S	0.770	0.67
251_A	254_E	0.770	0.67
162_E	165_K	0.770	0.67
52_V	428_F	0.768	0.67
358_N	362_E	0.767	0.67
360_T	392_Q	0.767	0.67
471_Q	475_N	0.767	0.67
432_K	435_E	0.766	0.67
192_I	240_V	0.766	0.67
398_L	401_M	0.765	0.67
185_E	249_I	0.765	0.67
578_L	597_L	0.763	0.66
214_Y	225_R	0.761	0.66
115_K	162_E	0.761	0.66
644_E	671_K	0.761	0.66
659_V	696_G	0.760	0.66
58_S	480_F	0.760	0.66
241_A	286_E	0.760	0.66
61_W	492_N	0.759	0.66
423_L	499_A	0.759	0.66
218_I	242_I	0.759	0.66
11_I	57_I	0.758	0.66
287_R	291_K	0.757	0.66
336_L	367_V	0.757	0.66
33_N	505_A	0.757	0.66
391_E	395_V	0.756	0.66
458_K	475_N	0.752	0.65
428_F	439_V	0.752	0.65
298_D	469_V	0.749	0.65
91_K	177_T	0.748	0.65
661_D	688_H	0.748	0.65
682_S	685_F	0.747	0.65
326_V	367_V	0.747	0.65
368_K	400_D	0.747	0.65
572_K	582_T	0.747	0.65
678_I	686_V	0.742	0.64
381_I	387_S	0.741	0.64
12_A	19_Q	0.737	0.64
347_K	376_V	0.736	0.64
25_V	45_Q	0.736	0.64
204_E	236_D	0.736	0.64
11_I	14_E	0.735	0.64
51_E	54_I	0.735	0.64
682_S	716_S	0.735	0.64
450_A	500_L	0.733	0.63
508_S	539_A	0.733	0.63
330_F	355_A	0.731	0.63
248_H	251_A	0.731	0.63
493_V	525_F	0.731	0.63
110_Q	113_K	0.728	0.63
92_I	104_L	0.726	0.63
527_N	556_E	0.726	0.63
62_Q	69_Q	0.726	0.63
251_A	255_K	0.724	0.62
140_L	161_I	0.723	0.62
372_E	375_Q	0.722	0.62
428_F	437_S	0.722	0.62
196_A	199_S	0.722	0.62
39_A	434_E	0.721	0.62
144_A	164_A	0.721	0.62
314_L	485_V	0.720	0.62
574_L	578_L	0.720	0.62
574_L	597_L	0.719	0.62
324_L	394_I	0.719	0.62
35_V	513_G	0.718	0.62
499_A	503_Y	0.717	0.62
394_I	397_V	0.717	0.62
8_K	13_K	0.717	0.62
197_G	237_I	0.716	0.62
195_A	241_A	0.716	0.62
674_G	715_L	0.713	0.61
664_A	699_V	0.712	0.61
171_Q	175_E	0.710	0.61
396_N	399_R	0.710	0.61
551_V	556_E	0.709	0.61
144_A	160_A	0.708	0.61
527_N	554_G	0.705	0.60
360_T	363_A	0.705	0.60
71_K	74_V	0.704	0.60
652_L	701_V	0.704	0.60
20_K	23_E	0.704	0.60
27_R	45_Q	0.703	0.60
533_D	555_T	0.702	0.60
573_A	577_K	0.701	0.60
636_L	698_I	0.701	0.60
148_I	153_E	0.701	0.60
655_T	698_I	0.701	0.60
299_E	303_H	0.701	0.60
355_A	393_F	0.700	0.60
187_F	190_G	0.700	0.60
185_E	248_H	0.699	0.60
12_A	15_I	0.698	0.60
518_K	535_P	0.698	0.60
196_A	205_K	0.698	0.60
264_S	267_E	0.697	0.59
406_Y	638_T	0.697	0.59
92_I	101_V	0.696	0.59
260_N	266_R	0.694	0.59
271_E	274_E	0.694	0.59
8_K	19_Q	0.694	0.59
611_I	614_K	0.694	0.59
314_L	469_V	0.694	0.59
196_A	206_N	0.693	0.59
17_L	56_T	0.692	0.59
131_I	140_L	0.691	0.59
244_P	277_Y	0.689	0.59
115_K	280_L	0.688	0.58
371_L	375_Q	0.688	0.58
175_E	257_I	0.688	0.58
322_T	338_V	0.685	0.58
25_V	46_T	0.684	0.58
350_V	434_E	0.684	0.58
613_L	617_C	0.683	0.58
706_V	713_V	0.682	0.58
300_Q	661_D	0.682	0.58
563_I	619_Q	0.680	0.58
355_A	359_K	0.680	0.58
230_N	293_L	0.680	0.58
336_L	351_I	0.680	0.58
178_F	252_Y	0.679	0.57
676_V	681_L	0.679	0.57
396_N	400_D	0.678	0.57
552_Q	560_R	0.676	0.57
348_I	437_S	0.676	0.57
276_S	279_R	0.676	0.57
413_A	657_R	0.675	0.57
250_K	274_E	0.674	0.57
487_N	505_A	0.674	0.57
185_E	245_P	0.671	0.57
320_G	341_E	0.671	0.57
357_V	360_T	0.671	0.57
33_N	543_E	0.671	0.57
599_L	614_K	0.670	0.56
35_V	58_S	0.670	0.56
456_D	475_N	0.670	0.56
440_S	444_R	0.670	0.56
701_V	717_M	0.669	0.56
72_E	76_R	0.668	0.56
537_L	545_C	0.668	0.56
134_L	138_D	0.667	0.56
428_F	498_A	0.666	0.56
318_M	378_M	0.666	0.56
329_A	424_A	0.664	0.56
381_I	393_F	0.664	0.56
94_Q	100_E	0.663	0.56
10_Q	64_I	0.662	0.56
597_L	617_C	0.662	0.56
502_Q	507_L	0.661	0.55
652_L	703_V	0.660	0.55
168_I	272_T	0.660	0.55
48_S	614_K	0.660	0.55
409_I	655_T	0.659	0.55
322_T	442_A	0.659	0.55
329_A	417_V	0.659	0.55
324_L	371_L	0.658	0.55
31_D	38_I	0.655	0.55
122_K	149_S	0.655	0.55
87_N	108_Y	0.653	0.55
226_V	290_R	0.653	0.55
369_K	372_E	0.653	0.55
666_V	674_G	0.653	0.55
178_F	182_I	0.652	0.54
560_R	624_E	0.652	0.54
265_V	269_L	0.652	0.54
25_V	29_L	0.652	0.54
532_K	572_K	0.651	0.54
322_T	346_L	0.650	0.54
22_V	26_I	0.650	0.54
680_K	683_N	0.649	0.54
338_V	347_K	0.648	0.54
306_S	481_V	0.648	0.54
660_V	695_V	0.648	0.54
408_V	445_L	0.647	0.54
41_Y	547_G	0.647	0.54
693_V	717_M	0.647	0.54
53_Q	56_T	0.647	0.54
368_K	402_P	0.647	0.54
177_T	180_K	0.646	0.54
500_L	504_V	0.646	0.54
244_P	282_Q	0.645	0.54
376_V	640_V	0.644	0.53
668_I	715_L	0.643	0.53
392_Q	641_L	0.641	0.53
173_S	280_L	0.641	0.53
522_I	539_A	0.641	0.53
117_T	174_D	0.640	0.53
586_G	594_I	0.640	0.53
78_I	104_L	0.639	0.53
8_K	12_A	0.639	0.53
209_E	709_Q	0.639	0.53
514_N	536_R	0.639	0.53
220_K	685_F	0.637	0.53
521_E	533_D	0.635	0.52
643_L	668_I	0.635	0.52
91_K	94_Q	0.634	0.52
279_R	283_P	0.631	0.52
157_R	373_Q	0.630	0.52
172_I	272_T	0.630	0.52
596_Q	599_L	0.629	0.52
336_L	370_I	0.629	0.52
148_I	156_T	0.627	0.52
262_S	265_V	0.627	0.52
648_E	708_V	0.626	0.51
417_V	433_V	0.626	0.51
348_I	352_Y	0.626	0.51
236_D	245_P	0.625	0.51
345_V	435_E	0.624	0.51
666_V	701_V	0.623	0.51
306_S	417_V	0.623	0.51
132_L	257_I	0.622	0.51
306_S	381_I	0.622	0.51
553_E	560_R	0.622	0.51
411_N	434_E	0.622	0.51
685_F	693_V	0.622	0.51
686_V	693_V	0.621	0.51
676_V	693_V	0.621	0.51
602_T	613_L	0.620	0.51
321_K	406_Y	0.620	0.51
55_Q	483_E	0.619	0.51
601_E	604_K	0.618	0.51
555_T	572_K	0.617	0.50
70_R	73_E	0.616	0.50
181_W	185_E	0.616	0.50
48_S	439_V	0.616	0.50
469_V	536_R	0.615	0.50
372_E	402_P	0.615	0.50
355_A	360_T	0.615	0.50
390_T	671_K	0.615	0.50
356_P	362_E	0.614	0.50
127_L	144_A	0.614	0.50
346_L	376_V	0.613	0.50
588_A	595_N	0.612	0.50
609_G	612_T	0.612	0.50
668_I	708_V	0.612	0.50
360_T	396_N	0.611	0.50
659_V	664_A	0.611	0.50
79_A	93_E	0.611	0.50
141_A	264_S	0.610	0.50
570_E	613_L	0.610	0.50
666_V	693_V	0.610	0.50
493_V	549_L	0.609	0.50
484_T	488_Q	0.609	0.50
365_E	368_K	0.607	0.49
72_E	93_E	0.607	0.49
130_Y	146_Q	0.606	0.49
575_L	582_T	0.605	0.49
354_H	357_V	0.601	0.49
223_P	296_K	0.601	0.49
600_S	604_K	0.601	0.49
318_M	631_V	0.600	0.48
386_A	390_T	0.599	0.48
130_Y	135_P	0.599	0.48
574_L	602_T	0.599	0.48
148_I	155_F	0.599	0.48
287_R	561_T	0.598	0.48
65_Q	69_Q	0.597	0.48
708_V	714_S	0.597	0.48
394_I	398_L	0.597	0.48
178_F	256_Q	0.596	0.48
254_E	258_I	0.596	0.48
485_V	711_G	0.596	0.48
536_R	539_A	0.596	0.48
37_F	42_R	0.595	0.48
311_K	695_V	0.595	0.48
371_L	403_R	0.595	0.48
184_Q	219_A	0.595	0.48
8_K	22_V	0.595	0.48
337_A	435_E	0.594	0.48
510_S	539_A	0.593	0.48
30_E	61_W	0.593	0.48
268_I	272_T	0.593	0.48
254_E	257_I	0.592	0.48
226_V	296_K	0.591	0.47
176_P	668_I	0.591	0.47
35_V	53_Q	0.590	0.47
575_L	578_L	0.588	0.47
246_A	282_Q	0.587	0.47
193_K	493_V	0.587	0.47
391_E	409_I	0.587	0.47
558_L	571_T	0.585	0.47
86_D	90_R	0.585	0.47
371_L	376_V	0.584	0.47
20_K	48_S	0.584	0.47
275_D	283_P	0.584	0.47
254_E	273_I	0.584	0.47
26_I	57_I	0.583	0.47
678_I	685_F	0.583	0.47
357_V	539_A	0.583	0.47
134_L	259_K	0.583	0.47
249_I	252_Y	0.583	0.47
329_A	434_E	0.582	0.46
301_A	469_V	0.581	0.46
51_E	425_R	0.580	0.46
21_H	25_V	0.580	0.46
185_E	244_P	0.579	0.46
10_Q	14_E	0.578	0.46
29_L	477_S	0.578	0.46
365_E	371_L	0.577	0.46
680_K	705_G	0.575	0.46
230_N	287_R	0.574	0.46
142_A	146_Q	0.574	0.46
662_F	665_F	0.574	0.46
35_V	549_L	0.573	0.45
191_T	217_P	0.573	0.45
453_V	482_V	0.573	0.45
411_N	459_S	0.573	0.45
329_A	485_V	0.572	0.45
194_S	214_Y	0.572	0.45
659_V	697_D	0.571	0.45
149_S	159_E	0.571	0.45
186_T	190_G	0.571	0.45
654_G	666_V	0.568	0.45
130_Y	134_L	0.568	0.45
504_V	562_G	0.568	0.45
131_I	165_K	0.568	0.45
73_E	110_Q	0.567	0.45
364_H	394_I	0.567	0.45
295_E	473_R	0.567	0.45
122_K	166_H	0.567	0.45
381_I	441_I	0.566	0.45
493_V	546_I	0.566	0.45
353_P	363_A	0.565	0.45
619_Q	622_R	0.565	0.45
55_Q	484_T	0.565	0.45
569_K	607_G	0.564	0.44
464_Q	536_R	0.564	0.44
680_K	717_M	0.563	0.44
502_Q	508_S	0.563	0.44
74_V	131_I	0.563	0.44
307_E	311_K	0.562	0.44
498_A	512_A	0.562	0.44
664_A	676_V	0.562	0.44
13_K	96_V	0.560	0.44
619_Q	671_K	0.560	0.44
330_F	357_V	0.560	0.44
175_E	252_Y	0.560	0.44
311_K	694_S	0.559	0.44
66_N	69_Q	0.558	0.44
230_N	298_D	0.558	0.44
426_E	498_A	0.558	0.44
378_M	470_S	0.558	0.44
391_E	640_V	0.556	0.43
175_E	618_E	0.555	0.43
281_I	469_V	0.555	0.43
643_L	672_Q	0.555	0.43
93_E	104_L	0.554	0.43
18_S	24_S	0.553	0.43
398_L	407_Y	0.553	0.43
562_G	618_E	0.553	0.43
417_V	455_I	0.553	0.43
571_T	587_T	0.553	0.43
458_K	471_Q	0.552	0.43
57_I	65_Q	0.552	0.43
13_K	267_E	0.551	0.43
240_V	508_S	0.551	0.43
111_K	174_D	0.551	0.43
117_T	122_K	0.550	0.43
395_V	575_L	0.550	0.43
351_I	397_V	0.550	0.43
285_I	288_E	0.550	0.43
120_K	129_D	0.549	0.43
573_A	605_E	0.549	0.43
371_L	379_V	0.549	0.43
45_Q	599_L	0.548	0.43
192_I	321_K	0.548	0.43
511_V	537_L	0.548	0.43
74_V	78_I	0.548	0.43
110_Q	118_V	0.547	0.42
388_R	409_I	0.546	0.42
413_A	417_V	0.545	0.42
169_A	276_S	0.545	0.42
561_T	661_D	0.544	0.42
200_A	205_K	0.544	0.42
172_I	257_I	0.544	0.42
589_E	596_Q	0.544	0.42
435_E	439_V	0.543	0.42
599_L	608_I	0.542	0.42
319_K	629_D	0.542	0.42
262_S	529_K	0.541	0.42
115_K	122_K	0.541	0.42
244_P	248_H	0.541	0.42
60_R	492_N	0.541	0.42
83_K	108_Y	0.541	0.42
603_A	611_I	0.541	0.42
276_S	280_L	0.540	0.42
527_N	552_Q	0.540	0.42
101_V	627_P	0.539	0.42
575_L	590_L	0.539	0.42
289_I	643_L	0.539	0.42
408_V	633_K	0.539	0.42
109_K	115_K	0.538	0.41
505_A	632_P	0.538	0.41
379_V	398_L	0.537	0.41
63_Y	98_L	0.537	0.41
210_M	710_K	0.537	0.41
127_L	164_A	0.537	0.41
166_H	279_R	0.536	0.41
464_Q	550_R	0.536	0.41
208_Y	232_G	0.536	0.41
44_E	625_R	0.536	0.41
507_L	646_L	0.536	0.41
131_I	172_I	0.535	0.41
209_E	710_K	0.535	0.41
359_K	573_A	0.535	0.41
215_E	529_K	0.534	0.41
158_E	381_I	0.534	0.41
473_R	477_S	0.534	0.41
480_F	483_E	0.533	0.41
352_Y	356_P	0.533	0.41
285_I	507_L	0.533	0.41
428_F	431_L	0.533	0.41
15_I	64_I	0.531	0.41
62_Q	66_N	0.530	0.41
149_S	155_F	0.530	0.41
148_I	160_A	0.530	0.41
56_T	303_H	0.528	0.40
298_D	417_V	0.528	0.40
249_I	254_E	0.528	0.40
545_C	637_K	0.528	0.40
27_R	530_E	0.527	0.40
125_E	544_Q	0.527	0.40
242_I	545_C	0.527	0.40
480_F	484_T	0.527	0.40
574_L	577_K	0.526	0.40
11_I	60_R	0.526	0.40
172_I	253_L	0.526	0.40
248_H	253_L	0.526	0.40
538_G	541_T	0.525	0.40
332_T	434_E	0.525	0.40
253_L	256_Q	0.525	0.40
51_E	563_I	0.525	0.40
16_G	19_Q	0.524	0.40
16_G	375_Q	0.523	0.40
195_A	215_E	0.523	0.40
269_L	276_S	0.523	0.40
203_D	237_I	0.523	0.40
148_I	596_Q	0.523	0.40
431_L	469_V	0.522	0.40
247_D	589_E	0.522	0.40
207_V	710_K	0.521	0.40
408_V	411_N	0.521	0.40
574_L	599_L	0.521	0.40
86_D	93_E	0.521	0.40
619_Q	624_E	0.521	0.40
265_V	268_I	0.521	0.40
136_Q	143_T	0.520	0.40
90_R	156_T	0.520	0.40
195_A	607_G	0.520	0.40
197_G	329_A	0.520	0.40
111_K	170_E	0.520	0.40
181_W	256_Q	0.519	0.39
326_V	381_I	0.519	0.39
573_A	596_Q	0.519	0.39
327_D	465_Y	0.519	0.39
69_Q	76_R	0.518	0.39
329_A	393_F	0.518	0.39
345_V	434_E	0.518	0.39
124_L	163_G	0.517	0.39
145_D	148_I	0.517	0.39
24_S	560_R	0.517	0.39
135_P	265_V	0.517	0.39
209_E	244_P	0.516	0.39
318_M	323_V	0.516	0.39
349_D	390_T	0.516	0.39
502_Q	509_K	0.515	0.39
54_I	434_E	0.515	0.39
470_S	473_R	0.514	0.39
200_A	203_D	0.514	0.39
543_E	638_T	0.514	0.39
541_T	555_T	0.514	0.39
332_T	336_L	0.514	0.39
334_C	390_T	0.514	0.39
166_H	680_K	0.514	0.39
256_Q	617_C	0.513	0.39
708_V	711_G	0.512	0.39
237_I	597_L	0.512	0.39
459_S	543_E	0.512	0.39
67_L	71_K	0.512	0.39
597_L	610_E	0.512	0.39
329_A	353_P	0.512	0.39
245_P	253_L	0.511	0.39
9_Q	56_T	0.510	0.38
80_E	295_E	0.510	0.38
109_K	291_K	0.510	0.38
612_T	615_D	0.510	0.38
192_I	268_I	0.509	0.38
304_I	688_H	0.509	0.38
95_S	100_E	0.508	0.38
367_V	379_V	0.508	0.38
172_I	177_T	0.508	0.38
309_L	706_V	0.507	0.38
518_K	524_K	0.507	0.38
74_V	106_R	0.506	0.38
240_V	290_R	0.505	0.38
72_E	526_S	0.505	0.38
318_M	408_V	0.504	0.38
17_L	556_E	0.504	0.38
330_F	386_A	0.503	0.38
647_K	708_V	0.503	0.38
253_L	578_L	0.503	0.38
293_L	696_G	0.503	0.38
493_V	647_K	0.502	0.38
141_A	145_D	0.502	0.38
522_I	555_T	0.502	0.38
134_L	263_T	0.502	0.38
186_T	242_I	0.502	0.38
402_P	526_S	0.501	0.37
9_Q	94_Q	0.501	0.37
149_S	345_V	0.501	0.37
493_V	705_G	0.501	0.37
375_Q	403_R	0.501	0.37
707_D	712_R	0.501	0.37
140_L	265_V	0.500	0.37
172_I	269_L	0.500	0.37
157_R	404_K	0.500	0.37
173_S	182_I	0.500	0.37

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3psiA	1	0.9499	100	0.194	Contact Map
3psfA	1	0.8693	100	0.2	Contact Map
3bzcA	1	0.9889	100	0.205	Contact Map
2k4kA	1	0.1085	99.7	0.918	Contact Map
1q8kA	1	0.1168	99.6	0.92	Contact Map
1kl9A	2	0.1001	99.6	0.921	Contact Map
3j81j	1	0.1168	99.6	0.922	Contact Map
3aevA	1	0.1057	99.6	0.922	Contact Map
4aidA	3	0.5452	99.6	0.922	Contact Map
4nngA	1	0.121	99.6	0.923	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0165 seconds.