YLAK - BACSU - GREMLIN Contacts

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YLAK - Uncharacterized protein YlaK

UniProt:	O07635	Sequences: MSKIYVLDTNVLLQDPNAIFSFEENEVVIPAVVLEEVDSKKRYMDEVGRNARHVSKLIDALRQKGRLHEHVPLDTGGTLRIELNHRSFHQLQEIFIEKTNDNRILAVAKNLSLEEETKENGRPVILVSKDVLVRVKADAIGLLAEDFLNDRVVDNDEMYSGYKDLYISQQLFSSFYGKNQISVNDVKQHAFYPNQFALMKDELGGSSSAVGIADKTGTVLKRLVFDDEHIWGIRPKNVQQTMALELLLREDIPLVTLIGKAGTGKTLLALAAGLLQTEDLGIYKKLVVARPIVPVGKDIGYLPGEKEEKLKPWMQPIFDNLEFLFNAKKPGELDAILAGIGSIQVEALTYIRGRSIPDQFIIIDEAQNLTRHEVKTLLTRVGEGSKIVLMGDPEQIDHPYLDSLNNGLAYVVERFKGQPISGSVKLLKGERSGLAQLAADLL	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	442 (428)
Sequences:	1097 (573)
Seq/√Len:	27.7

ECOLI - PHOH PHOL
BACSU - YLAK PHOL

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
246_L	422_G	8.955	1.00
360_F	388_V	5.874	1.00
163_K	195_Q	5.233	1.00
12_L	54_V	4.710	1.00
250_E	276_Q	4.331	1.00
13_L	40_K	3.675	1.00
244_L	272_A	3.608	1.00
4_I	124_V	3.356	1.00
273_G	360_F	3.355	1.00
196_F	246_L	3.343	1.00
398_H	401_L	3.183	1.00
129_K	146_D	3.171	1.00
196_F	245_E	3.114	1.00
361_I	385_S	2.953	1.00
252_I	422_G	2.912	1.00
198_L	238_V	2.774	1.00
230_I	244_L	2.697	1.00
243_A	257_L	2.661	0.99
288_V	317_I	2.619	0.99
211_G	220_L	2.589	0.99
276_Q	280_L	2.490	0.99
254_L	434_L	2.398	0.99
159_Y	195_Q	2.336	0.99
250_E	282_I	2.307	0.98
191_F	197_A	2.281	0.98
291_P	348_L	2.236	0.98
14_Q	150_D	2.191	0.98
66_R	69_E	2.189	0.98
26_E	122_R	2.187	0.98
101_D	104_I	2.161	0.98
20_F	57_L	2.159	0.98
244_L	268_L	2.153	0.98
39_S	99_T	2.120	0.97
273_G	286_L	2.097	0.97
73_L	79_L	2.085	0.97
415_F	421_S	2.053	0.97
253_P	433_G	2.044	0.97
7_L	12_L	2.025	0.96
176_Y	208_S	2.011	0.96
331_G	335_A	1.999	0.96
128_S	144_A	1.956	0.96
297_K	373_E	1.940	0.95
38_D	41_K	1.923	0.95
26_E	80_R	1.909	0.95
389_L	411_V	1.907	0.95
41_K	130_D	1.890	0.95
167_I	199_M	1.888	0.95
319_D	354_R	1.863	0.94
233_I	267_L	1.830	0.94
413_E	416_K	1.827	0.94
129_K	136_K	1.798	0.93
133_V	242_M	1.789	0.93
14_Q	405_N	1.778	0.93
275_L	280_L	1.773	0.93
13_L	47_V	1.761	0.92
294_P	349_T	1.753	0.92
201_D	206_S	1.735	0.92
15_D	147_F	1.729	0.92
128_S	355_S	1.727	0.92
172_F	176_Y	1.712	0.91
10_N	38_D	1.694	0.91
4_I	26_E	1.690	0.91
4_I	122_R	1.682	0.91
253_P	420_I	1.681	0.91
6_V	107_V	1.664	0.90
180_Q	233_I	1.658	0.90
13_L	51_A	1.657	0.90
230_I	275_L	1.634	0.89
82_E	85_H	1.632	0.89
169_Q	172_F	1.625	0.89
137_A	144_A	1.599	0.88
436_Q	440_D	1.597	0.88
109_K	112_S	1.584	0.88
21_S	149_N	1.581	0.88
256_T	423_S	1.578	0.88
62_R	67_L	1.555	0.87
8_D	11_V	1.546	0.86
229_H	234_R	1.532	0.86
6_V	28_V	1.516	0.85
41_K	52_R	1.509	0.85
105_L	133_V	1.508	0.85
59_D	134_R	1.507	0.85
150_D	436_Q	1.500	0.85
196_F	422_G	1.495	0.85
56_K	130_D	1.492	0.84
10_N	41_K	1.488	0.84
184_N	190_A	1.485	0.84
142_L	197_A	1.484	0.84
358_D	384_G	1.471	0.84
24_E	77_G	1.465	0.83
35_E	102_N	1.464	0.83
4_I	28_V	1.464	0.83
125_I	301_Y	1.459	0.83
136_K	146_D	1.456	0.83
164_D	200_K	1.449	0.83
62_R	138_D	1.447	0.82
173_S	182_S	1.432	0.82
19_I	39_S	1.430	0.82
361_I	387_I	1.426	0.82
192_Y	416_K	1.417	0.81
25_N	77_G	1.414	0.81
419_P	433_G	1.406	0.81
169_Q	173_S	1.406	0.81
283_Y	298_D	1.405	0.81
306_K	347_A	1.404	0.81
269_A	390_M	1.393	0.80
320_N	381_V	1.392	0.80
173_S	176_Y	1.390	0.80
58_I	79_L	1.390	0.80
270_L	320_N	1.387	0.80
162_Y	242_M	1.386	0.80
277_T	388_V	1.386	0.80
49_R	412_V	1.380	0.79
10_N	70_H	1.365	0.79
41_K	56_K	1.364	0.79
36_E	41_K	1.364	0.79
151_R	405_N	1.358	0.78
289_A	348_L	1.354	0.78
348_L	351_I	1.353	0.78
352_R	397_D	1.338	0.77
30_P	33_V	1.333	0.77
37_V	55_S	1.332	0.77
20_F	360_F	1.318	0.76
285_K	359_Q	1.318	0.76
51_A	233_I	1.314	0.76
125_I	143_L	1.311	0.76
164_D	195_Q	1.310	0.76
187_K	419_P	1.309	0.76
128_S	324_L	1.305	0.75
109_K	126_L	1.298	0.75
2_S	26_E	1.297	0.75
49_R	324_L	1.295	0.75
231_W	324_L	1.292	0.75
109_K	140_I	1.274	0.74
43_Y	48_G	1.273	0.73
3_K	25_N	1.269	0.73
34_L	131_V	1.263	0.73
80_R	177_G	1.252	0.72
36_E	52_R	1.249	0.72
133_V	312_P	1.241	0.72
381_V	434_L	1.240	0.71
257_L	424_V	1.230	0.71
10_N	14_Q	1.217	0.70
270_L	321_L	1.211	0.70
34_L	350_Y	1.208	0.69
284_K	326_N	1.204	0.69
102_N	136_K	1.202	0.69
52_R	56_K	1.202	0.69
368_N	401_L	1.195	0.69
35_E	136_K	1.190	0.68
286_L	337_L	1.181	0.68
384_G	418_Q	1.175	0.67
125_I	185_D	1.172	0.67
82_E	103_R	1.170	0.67
48_G	65_G	1.163	0.66
356_I	387_I	1.161	0.66
193_P	417_G	1.160	0.66
331_G	334_D	1.157	0.66
32_V	97_E	1.156	0.66
168_S	218_T	1.148	0.65
233_I	385_S	1.144	0.65
14_Q	132_L	1.143	0.65
212_I	245_E	1.142	0.65
19_I	301_Y	1.137	0.65
416_K	425_K	1.133	0.64
80_R	220_L	1.131	0.64
21_S	147_F	1.129	0.64
169_Q	233_I	1.128	0.64
35_E	375_K	1.126	0.64
292_I	315_Q	1.123	0.64
190_A	220_L	1.120	0.63
326_N	358_D	1.119	0.63
257_L	409_A	1.116	0.63
289_A	401_L	1.108	0.63
378_L	387_I	1.105	0.62
6_V	111_L	1.105	0.62
85_H	103_R	1.103	0.62
256_T	310_L	1.089	0.61
299_I	350_Y	1.087	0.61
3_K	123_P	1.085	0.61
38_D	56_K	1.082	0.61
381_V	385_S	1.079	0.61
32_V	100_N	1.077	0.60
40_K	43_Y	1.075	0.60
123_P	143_L	1.070	0.60
317_I	324_L	1.068	0.60
384_G	417_G	1.068	0.60
438_A	442_L	1.068	0.60
63_Q	251_D	1.066	0.60
145_E	150_D	1.057	0.59
52_R	130_D	1.056	0.59
14_Q	146_D	1.054	0.59
194_N	212_I	1.054	0.59
84_N	110_N	1.052	0.59
128_S	331_G	1.051	0.58
247_L	272_A	1.049	0.58
305_E	308_E	1.048	0.58
284_K	358_D	1.045	0.58
258_I	425_K	1.043	0.58
243_A	268_L	1.038	0.57
129_K	147_F	1.037	0.57
199_M	211_G	1.031	0.57
72_P	75_T	1.025	0.57
296_G	313_W	1.023	0.56
260_K	440_D	1.018	0.56
181_I	301_Y	1.016	0.56
16_P	435_A	1.015	0.56
65_G	273_G	1.015	0.56
64_K	142_L	1.012	0.56
198_L	208_S	1.011	0.55
3_K	145_E	1.009	0.55
250_E	280_L	1.004	0.55
58_I	121_G	0.998	0.54
392_D	437_L	0.996	0.54
55_S	235_P	0.996	0.54
346_E	359_Q	0.988	0.54
250_E	389_L	0.988	0.54
53_H	144_A	0.986	0.54
53_H	57_L	0.985	0.53
301_Y	305_E	0.983	0.53
20_F	28_V	0.981	0.53
305_E	324_L	0.977	0.53
182_S	286_L	0.976	0.53
22_F	70_H	0.974	0.53
332_E	335_A	0.971	0.52
312_P	379_T	0.971	0.52
120_N	123_P	0.969	0.52
72_P	78_T	0.969	0.52
171_L	174_S	0.967	0.52
138_D	356_I	0.957	0.51
173_S	207_S	0.954	0.51
29_I	51_A	0.952	0.51
14_Q	70_H	0.951	0.51
19_I	170_Q	0.951	0.51
144_A	427_L	0.951	0.51
181_I	184_N	0.948	0.51
260_K	436_Q	0.946	0.51
270_L	378_L	0.941	0.50
208_S	238_V	0.940	0.50
126_L	312_P	0.939	0.50
63_Q	184_N	0.938	0.50
24_E	145_E	0.938	0.50
125_I	145_E	0.937	0.50
312_P	429_G	0.936	0.50
2_S	6_V	0.935	0.50
62_R	65_G	0.934	0.50
126_L	133_V	0.933	0.50
273_G	288_V	0.931	0.49
167_I	171_L	0.929	0.49
51_A	81_I	0.926	0.49
168_S	171_L	0.921	0.49
10_N	102_N	0.915	0.48
316_P	346_E	0.914	0.48
34_L	363_I	0.913	0.48
14_Q	147_F	0.910	0.48
165_L	307_E	0.909	0.48
143_L	419_P	0.906	0.47
237_N	379_T	0.905	0.47
82_E	110_N	0.905	0.47
369_L	376_T	0.897	0.47
28_V	82_E	0.889	0.46
139_A	235_P	0.888	0.46
166_Y	202_E	0.886	0.46
302_L	319_D	0.879	0.45
136_K	371_R	0.875	0.45
25_N	316_P	0.871	0.45
202_E	220_L	0.868	0.45
242_M	246_L	0.868	0.45
378_L	411_V	0.868	0.45
161_G	435_A	0.860	0.44
212_I	417_G	0.859	0.44
437_L	441_L	0.858	0.44
302_L	354_R	0.858	0.44
12_L	16_P	0.853	0.43
68_H	440_D	0.853	0.43
379_T	429_G	0.853	0.43
55_S	132_L	0.850	0.43
239_Q	390_M	0.848	0.43
37_V	286_L	0.847	0.43
384_G	422_G	0.846	0.43
136_K	150_D	0.845	0.43
391_G	396_I	0.845	0.43
389_L	392_D	0.845	0.43
249_R	252_I	0.843	0.43
133_V	379_T	0.842	0.43
146_D	370_T	0.839	0.42
297_K	372_H	0.835	0.42
128_S	424_V	0.834	0.42
78_T	233_I	0.834	0.42
267_L	323_F	0.832	0.42
310_L	313_W	0.831	0.42
176_Y	209_A	0.828	0.42
247_L	268_L	0.824	0.41
361_I	381_V	0.822	0.41
36_E	130_D	0.818	0.41
175_F	222_R	0.817	0.41
128_S	301_Y	0.817	0.41
85_H	110_N	0.817	0.41
38_D	130_D	0.817	0.41
70_H	150_D	0.815	0.41
149_N	370_T	0.810	0.40
260_K	437_L	0.809	0.40
182_S	185_D	0.808	0.40
368_N	396_I	0.807	0.40
429_G	439_A	0.806	0.40
305_E	323_F	0.803	0.40
84_N	103_R	0.799	0.39
434_L	438_A	0.797	0.39
418_Q	437_L	0.797	0.39
97_E	103_R	0.797	0.39
269_A	273_G	0.796	0.39
18_A	108_A	0.794	0.39
8_D	130_D	0.793	0.39
170_Q	417_G	0.790	0.39
351_I	373_E	0.789	0.39
40_K	132_L	0.788	0.39
40_K	371_R	0.786	0.39
77_G	312_P	0.785	0.38
282_I	386_K	0.785	0.38
174_S	219_V	0.784	0.38
37_V	381_V	0.782	0.38
15_D	21_S	0.779	0.38
380_R	395_Q	0.778	0.38
37_V	54_V	0.777	0.38
31_A	95_F	0.776	0.38
256_T	294_P	0.771	0.37
313_W	376_T	0.771	0.37
320_N	368_N	0.770	0.37
193_P	215_K	0.768	0.37
316_P	406_N	0.768	0.37
82_E	107_V	0.765	0.37
30_P	136_K	0.763	0.37
10_N	132_L	0.761	0.37
26_E	78_T	0.760	0.37
146_D	299_I	0.755	0.36
432_S	435_A	0.753	0.36
192_Y	417_G	0.753	0.36
420_I	437_L	0.753	0.36
35_E	324_L	0.753	0.36
168_S	202_E	0.753	0.36
170_Q	173_S	0.749	0.36
378_L	401_L	0.748	0.36
5_Y	25_N	0.746	0.36
313_W	349_T	0.745	0.36
123_P	224_V	0.744	0.36
274_L	379_T	0.744	0.36
12_L	213_A	0.743	0.35
24_E	105_L	0.741	0.35
59_D	320_N	0.739	0.35
273_G	278_E	0.738	0.35
10_N	36_E	0.737	0.35
165_L	173_S	0.736	0.35
291_P	402_D	0.734	0.35
39_S	424_V	0.734	0.35
213_A	216_T	0.733	0.35
158_M	161_G	0.731	0.35
157_E	160_S	0.731	0.35
316_P	373_E	0.731	0.35
382_G	432_S	0.730	0.35
245_E	394_E	0.727	0.34
266_T	377_L	0.727	0.34
242_M	379_T	0.725	0.34
95_F	270_L	0.723	0.34
48_G	392_D	0.723	0.34
380_R	391_G	0.722	0.34
391_G	395_Q	0.722	0.34
127_V	139_A	0.722	0.34
181_I	186_V	0.718	0.34
39_S	75_T	0.718	0.34
57_L	144_A	0.717	0.34
124_V	416_K	0.714	0.33
379_T	387_I	0.714	0.33
64_K	160_S	0.711	0.33
22_F	129_K	0.709	0.33
112_S	143_L	0.707	0.33
41_K	104_I	0.706	0.33
31_A	97_E	0.705	0.33
391_G	406_N	0.704	0.33
379_T	438_A	0.702	0.33
53_H	424_V	0.700	0.33
263_T	430_E	0.699	0.32
20_F	387_I	0.695	0.32
138_D	393_P	0.694	0.32
39_S	100_N	0.689	0.32
215_K	233_I	0.686	0.32
295_V	376_T	0.686	0.32
66_R	135_V	0.683	0.31
27_V	64_K	0.683	0.31
289_A	293_V	0.682	0.31
258_I	412_V	0.682	0.31
232_G	356_I	0.680	0.31
349_T	415_F	0.679	0.31
345_V	429_G	0.677	0.31
69_E	75_T	0.675	0.31
128_S	416_K	0.674	0.31
303_P	312_P	0.673	0.31
5_Y	378_L	0.673	0.31
69_E	167_I	0.672	0.31
18_A	256_T	0.671	0.31
371_R	385_S	0.669	0.30
249_R	264_G	0.669	0.30
284_K	322_E	0.667	0.30
396_I	400_Y	0.665	0.30
386_K	438_A	0.664	0.30
140_I	194_N	0.664	0.30
239_Q	253_P	0.663	0.30
375_K	379_T	0.662	0.30
267_L	429_G	0.661	0.30
22_F	30_P	0.660	0.30
124_V	409_A	0.659	0.30
184_N	307_E	0.659	0.30
10_N	130_D	0.657	0.30
213_A	217_G	0.656	0.30
190_A	419_P	0.653	0.29
25_N	145_E	0.650	0.29
77_G	106_A	0.649	0.29
60_A	81_I	0.649	0.29
417_G	421_S	0.648	0.29
235_P	418_Q	0.648	0.29
126_L	333_L	0.647	0.29
31_A	239_Q	0.647	0.29
159_Y	409_A	0.645	0.29
200_K	214_D	0.645	0.29
163_K	417_G	0.644	0.29
135_V	148_L	0.643	0.29
19_I	27_V	0.643	0.29
5_Y	418_Q	0.642	0.29
124_V	261_A	0.641	0.29
374_V	389_L	0.640	0.29
126_L	150_D	0.637	0.28
313_W	415_F	0.636	0.28
373_E	376_T	0.635	0.28
37_V	121_G	0.635	0.28
170_Q	221_K	0.635	0.28
294_P	348_L	0.635	0.28
270_L	401_L	0.633	0.28
7_L	32_V	0.633	0.28
291_P	315_Q	0.633	0.28
3_K	125_I	0.630	0.28
295_V	350_Y	0.630	0.28
60_A	174_S	0.629	0.28
292_I	349_T	0.629	0.28
291_P	294_P	0.626	0.28
166_Y	424_V	0.626	0.28
92_Q	278_E	0.625	0.28
85_H	440_D	0.624	0.28
184_N	219_V	0.624	0.28
23_E	123_P	0.624	0.28
178_K	234_R	0.624	0.28
173_S	211_G	0.623	0.28
132_L	371_R	0.622	0.28
131_V	426_L	0.621	0.27
348_L	387_I	0.621	0.27
194_N	422_G	0.621	0.27
311_K	318_F	0.619	0.27
65_G	301_Y	0.618	0.27
298_D	387_I	0.618	0.27
392_D	402_D	0.617	0.27
277_T	283_Y	0.616	0.27
169_Q	202_E	0.616	0.27
135_V	235_P	0.616	0.27
111_L	370_T	0.615	0.27
80_R	111_L	0.614	0.27
182_S	219_V	0.614	0.27
316_P	402_D	0.614	0.27
192_Y	195_Q	0.614	0.27
52_R	101_D	0.614	0.27
58_I	143_L	0.613	0.27
314_M	430_E	0.613	0.27
326_N	441_L	0.613	0.27
306_K	361_I	0.613	0.27
328_K	355_S	0.612	0.27
89_H	111_L	0.611	0.27
259_G	392_D	0.611	0.27
391_G	408_L	0.611	0.27
63_Q	174_S	0.611	0.27
310_L	321_L	0.611	0.27
52_R	104_I	0.608	0.27
266_T	396_I	0.608	0.27
213_A	248_L	0.607	0.27
38_D	132_L	0.605	0.27
34_L	251_D	0.604	0.26
76_G	344_Q	0.603	0.26
291_P	392_D	0.602	0.26
10_N	195_Q	0.601	0.26
214_D	221_K	0.601	0.26
196_F	242_M	0.600	0.26
392_D	406_N	0.599	0.26
363_I	401_L	0.599	0.26
194_N	252_I	0.597	0.26
178_K	301_Y	0.597	0.26
212_I	249_R	0.595	0.26
34_L	301_Y	0.595	0.26
275_L	279_D	0.595	0.26
143_L	190_A	0.595	0.26
320_N	401_L	0.594	0.26
60_A	164_D	0.594	0.26
315_Q	351_I	0.592	0.26
297_K	306_K	0.591	0.26
423_S	437_L	0.591	0.26
257_L	376_T	0.589	0.26
178_K	185_D	0.589	0.26
46_E	57_L	0.588	0.26
62_R	317_I	0.588	0.26
58_I	277_T	0.588	0.26
395_Q	431_R	0.586	0.25
380_R	431_R	0.586	0.25
66_R	87_S	0.585	0.25
29_I	128_S	0.585	0.25
8_D	41_K	0.584	0.25
70_H	434_L	0.584	0.25
166_Y	170_Q	0.583	0.25
169_Q	201_D	0.582	0.25
269_A	400_Y	0.581	0.25
32_V	311_K	0.581	0.25
351_I	372_H	0.578	0.25
237_N	267_L	0.578	0.25
78_T	219_V	0.576	0.25
133_V	150_D	0.576	0.25
91_L	107_V	0.576	0.25
75_T	220_L	0.575	0.25
420_I	433_G	0.574	0.25
172_F	186_V	0.574	0.25
64_K	185_D	0.573	0.25
157_E	416_K	0.573	0.25
177_G	228_E	0.570	0.24
285_K	383_E	0.570	0.24
298_D	360_F	0.570	0.24
289_A	310_L	0.568	0.24
195_Q	416_K	0.568	0.24
214_D	249_R	0.567	0.24
14_Q	24_E	0.566	0.24
9_T	52_R	0.564	0.24
417_G	424_V	0.564	0.24
424_V	427_L	0.564	0.24
80_R	305_E	0.563	0.24
320_N	361_I	0.562	0.24
96_I	301_Y	0.562	0.24
381_V	387_I	0.559	0.24
235_P	397_D	0.559	0.24
352_R	367_Q	0.558	0.24
31_A	132_L	0.555	0.24
147_F	269_A	0.554	0.24
23_E	105_L	0.552	0.23
93_E	192_Y	0.551	0.23
146_D	371_R	0.550	0.23
391_G	431_R	0.550	0.23
95_F	371_R	0.549	0.23
348_L	356_I	0.547	0.23
294_P	372_H	0.546	0.23
412_V	423_S	0.545	0.23
275_L	286_L	0.545	0.23
195_Q	244_L	0.545	0.23
172_F	374_V	0.545	0.23
112_S	440_D	0.545	0.23
184_N	216_T	0.544	0.23
101_D	236_K	0.543	0.23
90_Q	174_S	0.542	0.23
381_V	386_K	0.541	0.23
83_L	426_L	0.541	0.23
247_L	384_G	0.540	0.23
92_Q	95_F	0.539	0.23
263_T	429_G	0.538	0.23
34_L	390_M	0.537	0.23
277_T	426_L	0.536	0.23
209_A	349_T	0.536	0.23
289_A	373_E	0.536	0.23
127_V	270_L	0.534	0.23
57_L	60_A	0.533	0.22
239_Q	389_L	0.533	0.22
368_N	399_P	0.531	0.22
277_T	342_S	0.531	0.22
86_R	301_Y	0.531	0.22
8_D	52_R	0.531	0.22
172_F	184_N	0.531	0.22
226_D	251_D	0.530	0.22
174_S	185_D	0.530	0.22
2_S	121_G	0.530	0.22
108_A	120_N	0.529	0.22
246_L	361_I	0.529	0.22
266_T	368_N	0.527	0.22
248_L	308_E	0.526	0.22
2_S	64_K	0.525	0.22
260_K	439_A	0.525	0.22
327_A	363_I	0.525	0.22
347_A	351_I	0.525	0.22
39_S	281_G	0.524	0.22
279_D	358_D	0.524	0.22
100_N	385_S	0.523	0.22
74_D	185_D	0.522	0.22
156_D	160_S	0.522	0.22
11_V	430_E	0.521	0.22
91_L	142_L	0.520	0.22
54_V	94_I	0.519	0.22
298_D	370_T	0.519	0.22
168_S	186_V	0.519	0.22
152_V	324_L	0.519	0.22
50_N	346_E	0.518	0.22
291_P	349_T	0.518	0.22
294_P	314_M	0.517	0.22
293_V	343_I	0.517	0.22
74_D	171_L	0.516	0.22
221_K	417_G	0.516	0.22
317_I	346_E	0.515	0.22
234_R	419_P	0.515	0.22
324_L	413_E	0.515	0.22
10_N	52_R	0.515	0.22
318_F	349_T	0.514	0.21
139_A	226_D	0.514	0.21
254_L	388_V	0.514	0.21
33_V	71_V	0.513	0.21
39_S	363_I	0.513	0.21
91_L	104_I	0.512	0.21
23_E	197_A	0.512	0.21
153_V	301_Y	0.512	0.21
187_K	234_R	0.511	0.21
174_S	180_Q	0.511	0.21
237_N	429_G	0.510	0.21
112_S	125_I	0.509	0.21
94_I	100_N	0.509	0.21
81_I	125_I	0.509	0.21
315_Q	346_E	0.508	0.21
310_L	314_M	0.508	0.21
306_K	410_Y	0.508	0.21
60_A	63_Q	0.508	0.21
303_P	319_D	0.508	0.21
362_I	366_A	0.508	0.21
72_P	202_E	0.507	0.21
266_T	391_G	0.506	0.21
106_A	243_A	0.506	0.21
90_Q	188_Q	0.506	0.21
69_E	123_P	0.506	0.21
100_N	111_L	0.505	0.21
225_F	245_E	0.504	0.21
80_R	157_E	0.504	0.21
230_I	248_L	0.503	0.21
23_E	218_T	0.502	0.21
157_E	307_E	0.502	0.21
306_K	359_Q	0.501	0.21
306_K	344_Q	0.501	0.21
51_A	279_D	0.500	0.21
123_P	183_V	0.500	0.21

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2hwyA	1	0.2466	100	0.802	Contact Map
2dokA	2	0.3281	100	0.834	Contact Map
3b85A	3	0.4118	99.9	0.863	Contact Map
3i8oA	2	0.3032	99.9	0.866	Contact Map
3ix7A	2	0.2851	99.8	0.883	Contact Map
3upuA	1	0.4208	99.7	0.892	Contact Map
3e1sA	1	0.6425	99.6	0.9	Contact Map
4c2uA	1	0.4706	99.6	0.9	Contact Map
1w36D	1	0.7285	99.6	0.902	Contact Map
3lfuA	1	0.4638	99.5	0.903	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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