YHFW - BACSU - GREMLIN Contacts

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YHFW - Putative Rieske 2Fe-2S iron-sulfur protein YhfW

UniProt:	O07622	Sequences: MANQHFAKEAPETYWKTSTDLPSFPALQEDTECDVTIIGGGITGITTAYELTKRGFRVVLIEANQVLNGTTAHTTAKVTAQHDMIYDEFIRHFGLNHARLYYEANQNAIDYIKGIVDEHQIDCEWIEQDAYLYTANENAVQKIHTEHEAYTKLGIERDLIKDLPIPLGSKLALVMKNQAQFHPLQYLKALLEQIVQKGGRIYEETVALDIKKGERPEVVTKSRHAIKSRFIICCSHFPFYDGGGLYAARMYSDRSYVLAIKPKIEYPEGMYLSIDQPSVALRYTVVNGEKLILFSGVSHKTGQGKAMSTHYETLRQLAESTIGIESIPYYWSTQDLVTIDKIPFIGPMSENEDNILVATGFKKWGMTSSAVAATLLSDLVEKKENPYESIFTPSRFHLNPGLQKVISYNADVAKHLIKGKLEKPDVQFEDISPGEGKAVTINGRRAGAFRDETGCLHLVDTTCTHLGCEVEWNDSEHTWDCPCHGSRFKPSGEVVEGPAIKPLKQIDLD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	509 (424)
Sequences:	3041 (2368)
Seq/√Len:	115.0

ECOLI - GLPA
BACSU - YHFW
HALSA - Q9HNS4

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
33_C	59_V	6.192	1.00
194_I	199_G	5.019	1.00
221_K	224_H	4.779	1.00
36_T	219_V	4.456	1.00
47_T	232_I	4.042	1.00
113_K	127_E	3.898	1.00
140_V	171_L	3.848	1.00
36_T	228_S	3.690	1.00
107_N	374_T	3.459	1.00
61_I	226_I	3.173	1.00
40_G	66_V	3.076	1.00
57_R	200_R	2.996	1.00
40_G	60_L	2.925	1.00
59_V	202_Y	2.914	1.00
158_D	164_P	2.906	1.00
206_V	222_S	2.895	1.00
43_T	361_F	2.832	1.00
36_T	226_I	2.802	1.00
61_I	207_A	2.722	1.00
124_E	185_Q	2.671	1.00
53_K	118_E	2.603	1.00
162_D	166_P	2.525	1.00
165_I	172_A	2.501	1.00
63_A	206_V	2.475	1.00
147_H	151_T	2.470	1.00
32_E	227_K	2.467	1.00
232_I	380_V	2.434	1.00
36_T	61_I	2.405	1.00
43_T	358_A	2.313	1.00
358_A	376_L	2.285	1.00
449_F	452_E	2.256	1.00
207_A	219_V	2.215	1.00
45_I	191_L	2.209	1.00
48_A	58_V	2.170	1.00
46_T	50_E	2.164	1.00
34_D	229_R	2.124	1.00
33_C	36_T	2.113	1.00
137_E	170_K	2.084	1.00
261_K	326_S	2.071	1.00
114_G	118_E	2.061	1.00
33_C	57_R	2.051	1.00
32_E	229_R	2.040	1.00
144_H	148_E	2.029	1.00
209_D	220_T	2.008	1.00
161_K	164_P	2.007	1.00
45_I	187_L	1.989	1.00
52_T	199_G	1.972	1.00
150_Y	157_R	1.943	1.00
191_L	201_I	1.929	1.00
211_K	218_V	1.890	1.00
218_V	225_A	1.870	1.00
33_C	200_R	1.859	1.00
415_H	419_G	1.854	1.00
42_I	369_S	1.854	1.00
148_E	152_K	1.833	1.00
131_Y	172_A	1.832	1.00
312_E	316_Q	1.825	1.00
54_R	381_E	1.811	1.00
129_D	174_V	1.792	1.00
378_D	385_N	1.784	1.00
308_S	312_E	1.772	1.00
186_Y	370_A	1.749	1.00
213_G	216_P	1.744	1.00
148_E	151_T	1.726	1.00
158_D	174_V	1.705	1.00
158_D	176_K	1.698	1.00
80_A	106_Q	1.672	1.00
434_G	452_E	1.657	1.00
141_Q	144_H	1.649	1.00
59_V	226_I	1.648	1.00
110_D	127_E	1.609	1.00
45_I	60_L	1.608	1.00
49_Y	193_Q	1.608	1.00
356_L	376_L	1.608	1.00
315_R	319_E	1.564	1.00
230_F	354_N	1.561	1.00
35_V	51_L	1.558	1.00
80_A	175_M	1.554	1.00
218_V	227_K	1.551	1.00
35_V	56_F	1.541	1.00
230_F	356_L	1.539	1.00
116_V	121_I	1.528	1.00
52_T	197_K	1.510	1.00
211_K	220_T	1.508	1.00
67_L	187_L	1.504	1.00
37_I	47_T	1.503	1.00
230_F	380_V	1.481	1.00
220_T	225_A	1.466	1.00
425_D	435_E	1.455	1.00
37_I	48_A	1.434	1.00
40_G	62_E	1.430	1.00
208_L	220_T	1.428	1.00
121_I	189_A	1.428	1.00
143_I	173_L	1.425	1.00
409_N	412_V	1.425	1.00
125_W	179_A	1.421	1.00
415_H	418_K	1.417	1.00
279_V	282_R	1.407	1.00
373_A	377_S	1.405	1.00
60_L	201_I	1.402	1.00
147_H	173_L	1.401	1.00
411_D	415_H	1.397	1.00
129_D	176_K	1.393	1.00
189_A	193_Q	1.386	1.00
202_Y	205_T	1.386	1.00
447_G	452_E	1.383	1.00
255_S	335_D	1.376	1.00
297_V	313_T	1.368	1.00
42_I	71_T	1.363	1.00
182_H	185_Q	1.357	1.00
49_Y	53_K	1.357	1.00
30_D	225_A	1.353	1.00
48_A	199_G	1.349	1.00
114_G	117_D	1.333	1.00
256_Y	299_H	1.329	1.00
448_A	452_E	1.329	1.00
52_T	194_I	1.327	1.00
116_V	123_C	1.323	1.00
65_Q	203_E	1.314	1.00
410_A	413_A	1.314	1.00
46_T	370_A	1.310	1.00
113_K	125_W	1.309	1.00
160_I	164_P	1.288	0.99
66_V	203_E	1.280	0.99
27_L	30_D	1.276	0.99
260_I	294_F	1.276	0.99
50_E	373_A	1.270	0.99
159_L	173_L	1.258	0.99
36_T	59_V	1.258	0.99
34_D	57_R	1.255	0.99
243_G	357_V	1.248	0.99
228_S	231_I	1.245	0.99
38_I	233_C	1.242	0.99
140_V	144_H	1.239	0.99
71_T	187_L	1.237	0.99
186_Y	190_L	1.235	0.99
66_V	201_I	1.233	0.99
46_T	373_A	1.229	0.99
391_F	395_R	1.224	0.99
417_I	424_P	1.222	0.99
130_A	178_Q	1.219	0.99
50_E	111_Y	1.219	0.99
391_F	396_F	1.210	0.99
307_M	310_H	1.210	0.99
112_I	186_Y	1.207	0.99
150_Y	154_G	1.204	0.99
448_A	451_D	1.201	0.99
257_V	293_L	1.187	0.99
56_F	381_E	1.182	0.99
78_V	112_I	1.179	0.99
47_T	234_C	1.178	0.99
212_K	217_E	1.161	0.99
356_L	380_V	1.161	0.99
60_L	191_L	1.157	0.99
32_E	57_R	1.155	0.99
395_R	399_N	1.148	0.99
144_H	159_L	1.148	0.99
145_T	148_E	1.143	0.99
46_T	186_Y	1.138	0.99
50_E	54_R	1.134	0.99
67_L	184_L	1.121	0.99
407_S	413_A	1.119	0.99
451_D	457_H	1.112	0.98
205_T	223_R	1.110	0.98
340_D	346_G	1.108	0.98
53_K	197_K	1.105	0.98
140_V	170_K	1.104	0.98
147_H	159_L	1.100	0.98
393_P	398_L	1.098	0.98
450_R	456_L	1.095	0.98
141_Q	145_T	1.093	0.98
136_N	139_A	1.083	0.98
220_T	224_H	1.078	0.98
384_E	388_E	1.077	0.98
412_V	415_H	1.074	0.98
407_S	410_A	1.073	0.98
50_E	374_T	1.073	0.98
297_V	310_H	1.073	0.98
255_S	295_S	1.071	0.98
64_N	68_N	1.064	0.98
104_A	391_F	1.064	0.98
111_Y	115_I	1.051	0.98
205_T	221_K	1.051	0.98
106_Q	110_D	1.051	0.98
159_L	171_L	1.044	0.98
377_S	380_V	1.043	0.98
46_T	369_S	1.039	0.98
113_K	117_D	1.037	0.98
119_H	193_Q	1.032	0.98
404_K	407_S	1.030	0.97
405_V	409_N	1.028	0.97
109_I	125_W	1.028	0.97
112_I	370_A	1.026	0.97
191_L	195_V	1.025	0.97
432_S	435_E	1.024	0.97
384_E	387_Y	1.024	0.97
104_A	375_L	1.017	0.97
122_D	185_Q	1.016	0.97
205_T	226_I	1.003	0.97
414_K	418_K	1.002	0.97
66_V	191_L	1.001	0.97
54_R	377_S	0.999	0.97
65_Q	204_E	0.996	0.97
111_Y	114_G	0.989	0.97
33_C	226_I	0.987	0.97
48_A	60_L	0.987	0.97
150_Y	155_I	0.985	0.97
371_V	374_T	0.982	0.97
137_E	141_Q	0.982	0.97
378_D	383_K	0.981	0.97
165_I	169_S	0.980	0.97
267_P	270_M	0.978	0.97
422_E	435_E	0.974	0.96
406_I	413_A	0.970	0.96
76_A	366_M	0.965	0.96
210_I	231_I	0.965	0.96
406_I	409_N	0.960	0.96
396_F	399_N	0.956	0.96
408_Y	413_A	0.955	0.96
409_N	413_A	0.953	0.96
43_T	234_C	0.948	0.96
338_T	341_K	0.947	0.96
59_V	200_R	0.945	0.96
103_E	107_N	0.942	0.96
411_D	414_K	0.940	0.96
162_D	165_I	0.937	0.96
51_L	380_V	0.937	0.96
210_I	355_I	0.937	0.96
259_A	331_W	0.936	0.96
254_R	334_Q	0.936	0.96
46_T	190_L	0.935	0.96
181_F	186_Y	0.934	0.96
242_G	245_L	0.933	0.96
447_G	451_D	0.929	0.95
380_V	384_E	0.926	0.95
210_I	217_E	0.925	0.95
396_F	400_P	0.924	0.95
261_K	289_E	0.923	0.95
405_V	413_A	0.919	0.95
47_T	376_L	0.914	0.95
338_T	360_G	0.910	0.95
134_T	143_I	0.909	0.95
315_R	330_Y	0.908	0.95
442_N	445_R	0.897	0.94
160_I	165_I	0.897	0.94
121_I	124_E	0.896	0.94
446_A	452_E	0.896	0.94
294_F	318_A	0.896	0.94
337_V	341_K	0.895	0.94
442_N	447_G	0.893	0.94
208_L	222_S	0.889	0.94
139_A	275_D	0.884	0.94
90_I	152_K	0.882	0.94
232_I	376_L	0.881	0.94
127_E	177_N	0.880	0.94
142_K	145_T	0.880	0.94
217_E	352_E	0.879	0.94
434_G	437_K	0.876	0.94
358_A	372_A	0.873	0.94
446_A	449_F	0.873	0.94
75_T	283_Y	0.873	0.94
151_T	156_E	0.872	0.94
38_I	231_I	0.872	0.94
233_C	355_I	0.871	0.94
219_V	224_H	0.871	0.94
273_S	280_A	0.871	0.94
275_D	280_A	0.868	0.93
255_S	298_S	0.868	0.93
26_A	202_Y	0.857	0.93
433_P	456_L	0.857	0.93
317_L	320_S	0.854	0.93
78_V	125_W	0.853	0.93
361_F	372_A	0.848	0.93
31_T	59_V	0.848	0.93
37_I	201_I	0.848	0.93
416_L	419_G	0.844	0.92
375_L	379_L	0.843	0.92
231_I	354_N	0.841	0.92
390_I	395_R	0.836	0.92
375_L	378_D	0.836	0.92
210_I	240_Y	0.833	0.92
79_T	364_W	0.832	0.92
56_F	230_F	0.826	0.92
345_I	376_L	0.824	0.92
281_L	285_V	0.823	0.91
258_L	327_I	0.817	0.91
282_R	285_V	0.814	0.91
42_I	187_L	0.811	0.91
49_Y	190_L	0.810	0.91
75_T	366_M	0.810	0.91
53_K	119_H	0.810	0.91
35_V	232_I	0.808	0.91
45_I	201_I	0.807	0.91
356_L	379_L	0.806	0.91
215_R	229_R	0.806	0.91
146_E	150_Y	0.804	0.91
115_I	119_H	0.803	0.90
50_E	377_S	0.798	0.90
116_V	186_Y	0.797	0.90
75_T	257_V	0.797	0.90
343_P	346_G	0.796	0.90
390_I	393_P	0.795	0.90
99_R	103_E	0.792	0.90
441_I	446_A	0.792	0.90
34_D	56_F	0.791	0.90
335_D	364_W	0.788	0.90
447_G	450_R	0.788	0.90
230_F	384_E	0.787	0.90
339_I	343_P	0.785	0.89
105_N	364_W	0.783	0.89
37_I	194_I	0.783	0.89
335_D	368_S	0.782	0.89
26_A	223_R	0.782	0.89
78_V	113_K	0.782	0.89
140_V	161_K	0.781	0.89
423_K	436_G	0.780	0.89
440_T	445_R	0.779	0.89
309_T	312_E	0.778	0.89
273_S	279_V	0.777	0.89
131_Y	269_G	0.776	0.89
143_I	147_H	0.773	0.89
53_K	193_Q	0.771	0.89
280_A	283_Y	0.770	0.89
194_I	198_G	0.770	0.89
48_A	194_I	0.768	0.88
73_H	333_T	0.767	0.88
426_V	430_D	0.765	0.88
117_D	222_S	0.765	0.88
213_G	227_K	0.765	0.88
49_Y	119_H	0.765	0.88
426_V	434_G	0.764	0.88
28_Q	223_R	0.764	0.88
37_I	58_V	0.762	0.88
86_Y	149_A	0.761	0.88
74_T	366_M	0.760	0.88
111_Y	374_T	0.759	0.88
147_H	157_R	0.756	0.88
431_I	434_G	0.756	0.88
277_P	280_A	0.756	0.88
40_G	191_L	0.754	0.87
374_T	377_S	0.754	0.87
255_S	297_V	0.753	0.87
70_T	237_F	0.752	0.87
284_T	322_I	0.752	0.87
297_V	335_D	0.752	0.87
42_I	366_M	0.750	0.87
194_I	201_I	0.748	0.87
303_Q	411_D	0.745	0.87
80_A	178_Q	0.744	0.87
285_V	293_L	0.742	0.87
150_Y	153_L	0.741	0.87
193_Q	197_K	0.740	0.86
47_T	373_A	0.738	0.86
439_V	443_G	0.736	0.86
76_A	184_L	0.736	0.86
392_T	395_R	0.734	0.86
36_T	207_A	0.731	0.86
144_H	171_L	0.730	0.86
77_K	335_D	0.728	0.86
281_L	284_T	0.728	0.86
263_K	325_E	0.727	0.86
107_N	110_D	0.726	0.85
134_T	171_L	0.725	0.85
423_K	440_T	0.724	0.85
405_V	410_A	0.723	0.85
215_R	218_V	0.723	0.85
81_Q	132_L	0.715	0.85
134_T	139_A	0.714	0.84
450_R	457_H	0.708	0.84
421_L	424_P	0.708	0.84
35_V	230_F	0.706	0.84
348_M	351_N	0.705	0.84
256_Y	332_S	0.704	0.84
413_A	417_I	0.703	0.84
408_Y	416_L	0.702	0.83
442_N	446_A	0.701	0.83
129_D	134_T	0.701	0.83
157_R	175_M	0.701	0.83
243_G	247_A	0.700	0.83
31_T	57_R	0.700	0.83
414_K	417_I	0.699	0.83
235_S	239_F	0.698	0.83
209_D	389_S	0.697	0.83
156_E	176_K	0.697	0.83
273_S	321_T	0.697	0.83
311_Y	330_Y	0.694	0.83
31_T	226_I	0.694	0.83
335_D	363_K	0.694	0.83
446_A	451_D	0.692	0.83
149_A	153_L	0.692	0.83
119_H	189_A	0.691	0.83
265_E	290_K	0.691	0.83
448_A	458_L	0.690	0.82
79_T	335_D	0.690	0.82
77_K	363_K	0.689	0.82
235_S	242_G	0.689	0.82
27_L	226_I	0.687	0.82
26_A	29_E	0.687	0.82
204_E	222_S	0.686	0.82
187_L	254_R	0.686	0.82
266_Y	270_M	0.684	0.82
134_T	140_V	0.683	0.82
78_V	181_F	0.681	0.82
27_L	202_Y	0.680	0.82
77_K	364_W	0.677	0.81
423_K	439_V	0.677	0.81
45_I	194_I	0.677	0.81
160_I	169_S	0.676	0.81
409_N	415_H	0.673	0.81
408_Y	411_D	0.672	0.81
412_V	419_G	0.672	0.81
291_L	431_I	0.671	0.81
116_V	125_W	0.670	0.81
342_I	346_G	0.670	0.81
435_E	439_V	0.670	0.81
110_D	156_E	0.668	0.80
115_I	193_Q	0.667	0.80
426_V	432_S	0.667	0.80
412_V	418_K	0.661	0.80
413_A	420_K	0.661	0.80
210_I	233_C	0.661	0.80
132_L	274_I	0.660	0.80
311_Y	314_L	0.659	0.79
266_Y	271_Y	0.658	0.79
192_E	444_R	0.657	0.79
101_Y	105_N	0.656	0.79
425_D	444_R	0.654	0.79
62_E	203_E	0.654	0.79
54_R	383_K	0.654	0.79
452_E	455_C	0.654	0.79
50_E	370_A	0.653	0.79
291_L	328_P	0.653	0.79
106_Q	155_I	0.651	0.79
216_P	229_R	0.649	0.78
405_V	408_Y	0.649	0.78
254_R	332_S	0.649	0.78
403_Q	407_S	0.648	0.78
422_E	439_V	0.648	0.78
216_P	354_N	0.647	0.78
251_Y	300_K	0.646	0.78
110_D	113_K	0.646	0.78
82_H	178_Q	0.641	0.78
345_I	368_S	0.639	0.77
31_T	202_Y	0.639	0.77
79_T	130_A	0.639	0.77
64_N	204_E	0.638	0.77
406_I	414_K	0.638	0.77
83_D	298_S	0.637	0.77
260_I	318_A	0.636	0.77
300_K	303_Q	0.635	0.77
338_T	343_P	0.635	0.77
35_V	58_V	0.635	0.77
70_T	336_L	0.633	0.77
261_K	328_P	0.632	0.77
184_L	188_K	0.629	0.76
361_F	369_S	0.629	0.76
337_V	362_K	0.627	0.76
280_A	285_V	0.626	0.76
340_D	347_P	0.626	0.76
111_Y	370_A	0.626	0.76
109_I	367_T	0.625	0.76
76_A	181_F	0.625	0.76
121_I	186_Y	0.625	0.76
31_T	200_R	0.625	0.76
340_D	344_F	0.624	0.76
410_A	414_K	0.623	0.76
215_R	227_K	0.622	0.75
263_K	323_G	0.622	0.75
428_F	434_G	0.621	0.75
339_I	344_F	0.621	0.75
151_T	154_G	0.619	0.75
257_V	297_V	0.618	0.75
406_I	410_A	0.617	0.75
253_D	298_S	0.616	0.75
115_I	190_L	0.613	0.74
280_A	284_T	0.613	0.74
236_H	333_T	0.613	0.74
295_S	298_S	0.612	0.74
315_R	327_I	0.612	0.74
207_A	239_F	0.610	0.74
105_N	367_T	0.610	0.74
110_D	177_N	0.610	0.74
345_I	349_S	0.607	0.74
340_D	345_I	0.605	0.73
244_G	247_A	0.604	0.73
313_T	317_L	0.603	0.73
446_A	450_R	0.603	0.73
440_T	443_G	0.603	0.73
426_V	444_R	0.602	0.73
79_T	82_H	0.602	0.73
253_D	362_K	0.602	0.73
260_I	263_K	0.602	0.73
43_T	372_A	0.598	0.73
195_V	201_I	0.596	0.72
441_I	458_L	0.596	0.72
233_C	239_F	0.595	0.72
416_L	420_K	0.594	0.72
302_G	332_S	0.593	0.72
65_Q	450_R	0.593	0.72
278_S	281_L	0.591	0.72
429_E	458_L	0.591	0.72
149_A	152_K	0.590	0.72
445_R	450_R	0.590	0.72
262_P	292_I	0.589	0.71
275_D	278_S	0.589	0.71
442_N	448_A	0.588	0.71
428_F	433_P	0.587	0.71
260_I	327_I	0.586	0.71
389_S	392_T	0.586	0.71
73_H	236_H	0.586	0.71
194_I	197_K	0.585	0.71
430_D	453_T	0.585	0.71
49_Y	197_K	0.584	0.71
258_L	311_Y	0.583	0.71
230_F	383_K	0.582	0.71
231_I	355_I	0.582	0.71
254_R	299_H	0.580	0.70
415_H	420_K	0.580	0.70
131_Y	160_I	0.579	0.70
47_T	377_S	0.578	0.70
193_Q	196_Q	0.577	0.70
393_P	396_F	0.576	0.70
444_R	447_G	0.576	0.70
391_F	394_S	0.575	0.70
195_V	199_G	0.574	0.70
373_A	376_L	0.573	0.69
441_I	452_E	0.572	0.69
217_E	231_I	0.571	0.69
141_Q	148_E	0.569	0.69
105_N	368_S	0.569	0.69
311_Y	315_R	0.568	0.69
163_L	166_P	0.568	0.69
275_D	282_R	0.567	0.69
256_Y	310_H	0.567	0.69
74_T	183_P	0.567	0.69
130_A	175_M	0.566	0.68
415_H	443_G	0.562	0.68
343_P	348_M	0.562	0.68
77_K	178_Q	0.562	0.68
374_T	378_D	0.561	0.68
128_Q	270_M	0.561	0.68
78_V	367_T	0.560	0.68
38_I	242_G	0.559	0.67
90_I	153_L	0.559	0.67
255_S	363_K	0.559	0.67
70_T	74_T	0.558	0.67
391_F	398_L	0.555	0.67
210_I	245_L	0.554	0.67
205_T	208_L	0.553	0.67
151_T	213_G	0.553	0.67
253_D	300_K	0.551	0.66
105_N	109_I	0.551	0.66
283_Y	294_F	0.550	0.66
77_K	105_N	0.549	0.66
417_I	420_K	0.548	0.66
43_T	187_L	0.548	0.66
211_K	216_P	0.547	0.66
258_L	314_L	0.547	0.66
212_K	354_N	0.547	0.66
205_T	222_S	0.546	0.66
65_Q	68_N	0.546	0.66
160_I	172_A	0.543	0.65
279_V	283_Y	0.542	0.65
407_S	416_L	0.541	0.65
346_G	349_S	0.540	0.65
116_V	119_H	0.537	0.64
103_E	117_D	0.536	0.64
135_A	321_T	0.535	0.64
393_P	405_V	0.535	0.64
105_N	108_A	0.535	0.64
206_V	241_D	0.535	0.64
86_Y	98_A	0.534	0.64
132_L	272_L	0.534	0.64
316_Q	320_S	0.533	0.64
274_I	277_P	0.533	0.64
430_D	433_P	0.532	0.64
106_Q	109_I	0.528	0.63
433_P	437_K	0.528	0.63
445_R	448_A	0.528	0.63
163_L	169_S	0.527	0.63
121_I	181_F	0.527	0.63
358_A	361_F	0.527	0.63
338_T	362_K	0.526	0.63
392_T	398_L	0.526	0.63
62_E	207_A	0.526	0.63
78_V	366_M	0.525	0.63
409_N	420_K	0.525	0.63
211_K	225_A	0.525	0.63
429_E	432_S	0.524	0.63
30_D	227_K	0.524	0.63
70_T	236_H	0.524	0.63
437_K	448_A	0.523	0.62
237_F	334_Q	0.523	0.62
440_T	448_A	0.522	0.62
413_A	419_G	0.522	0.62
276_Q	280_A	0.520	0.62
168_G	320_S	0.519	0.62
90_I	98_A	0.518	0.62
148_E	181_F	0.517	0.62
78_V	109_I	0.517	0.62
195_V	446_A	0.517	0.62
453_T	457_H	0.515	0.61
101_Y	364_W	0.514	0.61
306_A	330_Y	0.513	0.61
249_R	405_V	0.513	0.61
380_V	385_N	0.513	0.61
254_R	301_T	0.513	0.61
249_R	339_I	0.513	0.61
178_Q	270_M	0.512	0.61
258_L	315_R	0.512	0.61
81_Q	175_M	0.512	0.61
416_L	421_L	0.512	0.61
83_D	105_N	0.511	0.61
387_Y	390_I	0.511	0.61
112_I	369_S	0.510	0.60
259_A	329_Y	0.510	0.60
131_Y	165_I	0.510	0.60
212_K	218_V	0.509	0.60
79_T	255_S	0.509	0.60
362_K	368_S	0.509	0.60
274_I	285_V	0.508	0.60
77_K	280_A	0.507	0.60
278_S	282_R	0.507	0.60
208_L	211_K	0.507	0.60
377_S	381_E	0.504	0.60
45_I	190_L	0.504	0.60
342_I	345_I	0.504	0.60
62_E	66_V	0.503	0.59
338_T	344_F	0.503	0.59
418_K	421_L	0.503	0.59
397_H	401_G	0.503	0.59
440_T	444_R	0.503	0.59
62_E	226_I	0.501	0.59
444_R	448_A	0.501	0.59
67_L	191_L	0.500	0.59
52_T	195_V	0.500	0.59

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4h1bA	1	0.6935	100	0.586	Contact Map
4x9mA	1	0.6974	100	0.602	Contact Map
3pvcA	1	0.7544	100	0.613	Contact Map
2rghA	2	0.9057	100	0.613	Contact Map
3da1A	1	0.8094	100	0.614	Contact Map
1ryiA	4	0.6778	100	0.615	Contact Map
3ps9A	1	0.7505	100	0.615	Contact Map
2qcuA	2	0.8487	100	0.616	Contact Map
1y56B	1	0.6955	100	0.617	Contact Map
2gf3A	1	0.7033	100	0.619	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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