HEMAT - BACSU - GREMLIN Contacts

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HEMAT - Heme-based aerotactic transducer HemAT

UniProt:	O07621	Sequences: MLFKKDRKQETAYFSDSNGQQKNRIQLTNKHADVKKQLKMVRLGDAELYVLEQLQPLIQENIVNIVDAFYKNLDHESSLMDIINDHSSVDRLKQTLKRHIQEMFAGVIDDEFIEKRNRIASIHLRIGLLPKWYMGAFQELLLSMIDIYEASITNQQELLKAIKATTKILNLEQQLVLEAFQSEYNQTRDEQEEKKNLLHQKIQETSGSIANLFSETSRSVQELVDKSEGISQASKAGTVTSSTVEEKSIGGKKELEVQQKQMNKIDTSLVQIEKEMVKLDEIAQQIEKIFGIVTGIAEQTNLLSLNASIESARAGEHGKGFAVVANEVRKLSEDTKKTVSTVSELVNNTNTQINIVSKHIKDVNELVSESKEKMTQINRLFDEIVHSMKISKEQSGKIDVDLQAFLGGLQEVSRAVSHVAASVDSLVILTEE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	432 (394)
Sequences:	14433 (12258)
Seq/√Len:	617.5

ECOLI - MCP3 MCP2 MCP4 MCP1 AER
BACSU - HEMAT YVAQ YOAH TLPA MCPB TLPB MCPA MCPC TLPC YFMS
HALSA - Q9HQX8 HMAT HTR7 Q9HPA2 HTR9 Q9HS86 HTR4 Q9HP10 Q9HQT5 HTR2 COST Q9HRA1 Q9HR88 Q9HRN6 Q9HPQ5 HTR1 Q9HPW6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
167_K	172_E	3.362	1.00
77_S	80_M	2.894	1.00
278_K	352_Q	2.565	1.00
167_K	175_L	2.510	1.00
268_S	362_D	2.250	1.00
189_D	192_E	2.231	1.00
166_T	183_E	2.101	1.00
229_G	232_Q	2.093	1.00
129_L	133_Y	2.075	1.00
98_R	102_E	2.053	1.00
282_I	352_Q	2.039	1.00
176_V	196_N	2.038	1.00
152_I	156_Q	2.034	1.00
202_I	209_I	2.012	1.00
285_Q	288_K	1.980	1.00
291_G	295_G	1.964	1.00
267_T	271_Q	1.946	1.00
265_I	370_S	1.935	1.00
161_A	185_N	1.898	1.00
36_K	40_M	1.861	1.00
260_K	264_K	1.849	1.00
365_E	369_E	1.840	1.00
151_S	155_Q	1.837	1.00
276_M	356_V	1.816	1.00
105_A	109_D	1.800	1.00
71_K	75_H	1.799	1.00
176_V	193_E	1.786	1.00
162_I	183_E	1.783	1.00
257_V	260_K	1.780	1.00
335_T	339_V	1.772	1.00
354_N	358_K	1.771	1.00
49_Y	53_Q	1.768	1.00
68_A	71_K	1.758	1.00
52_E	56_P	1.756	1.00
250_G	253_K	1.755	1.00
287_E	350_N	1.754	1.00
239_V	242_S	1.747	1.00
48_L	52_E	1.746	1.00
166_T	170_N	1.745	1.00
281_E	284_Q	1.744	1.00
368_S	372_E	1.744	1.00
270_V	368_S	1.744	1.00
361_K	365_E	1.723	1.00
375_T	379_R	1.713	1.00
288_K	291_G	1.708	1.00
277_V	281_E	1.707	1.00
343_S	347_N	1.705	1.00
282_I	348_N	1.701	1.00
259_Q	378_N	1.696	1.00
253_K	257_V	1.688	1.00
192_E	196_N	1.672	1.00
411_E	414_R	1.672	1.00
330_K	333_E	1.670	1.00
46_A	49_Y	1.661	1.00
87_S	91_R	1.659	1.00
239_V	243_T	1.655	1.00
278_K	281_E	1.649	1.00
45_D	48_L	1.644	1.00
70_Y	74_D	1.637	1.00
365_E	368_S	1.635	1.00
133_Y	137_F	1.634	1.00
101_Q	105_A	1.627	1.00
275_E	355_I	1.622	1.00
274_K	278_K	1.616	1.00
280_D	357_S	1.600	1.00
185_N	191_Q	1.590	1.00
185_N	189_D	1.571	1.00
181_Q	185_N	1.551	1.00
271_Q	274_K	1.550	1.00
277_V	361_K	1.540	1.00
333_E	337_K	1.539	1.00
196_N	200_Q	1.534	1.00
116_R	120_A	1.524	1.00
176_V	189_D	1.519	1.00
417_S	421_A	1.511	1.00
243_T	246_E	1.510	1.00
294_T	343_S	1.509	1.00
90_D	94_Q	1.508	1.00
263_N	375_T	1.499	1.00
372_E	376_Q	1.494	1.00
369_E	372_E	1.492	1.00
337_K	341_T	1.486	1.00
112_F	116_R	1.484	1.00
358_K	362_D	1.477	1.00
279_L	356_V	1.461	1.00
192_E	195_K	1.457	1.00
165_T	191_Q	1.453	1.00
249_I	253_K	1.449	1.00
274_K	277_V	1.444	1.00
242_S	246_E	1.439	1.00
67_D	71_K	1.438	1.00
267_T	270_V	1.437	1.00
270_V	274_K	1.434	1.00
266_D	371_K	1.424	1.00
89_V	93_K	1.421	1.00
53_Q	57_L	1.420	1.00
203_Q	207_G	1.397	1.00
168_I	192_E	1.392	1.00
225_D	229_G	1.387	1.00
155_Q	158_L	1.385	1.00
195_K	198_L	1.383	1.00
52_E	55_Q	1.376	1.00
165_T	188_R	1.372	1.00
376_Q	379_R	1.370	1.00
154_N	157_E	1.360	1.00
362_D	365_E	1.358	1.00
347_N	351_T	1.358	1.00
383_E	386_H	1.352	1.00
236_A	239_V	1.348	1.00
264_K	366_L	1.344	1.00
71_K	74_D	1.342	1.00
189_D	193_E	1.341	1.00
249_I	389_K	1.341	1.00
36_K	39_K	1.340	1.00
68_A	72_N	1.339	1.00
281_E	285_Q	1.337	1.00
397_K	400_V	1.331	1.00
215_E	218_R	1.329	1.00
271_Q	362_D	1.329	1.00
272_I	360_I	1.328	1.00
418_H	421_A	1.326	1.00
264_K	369_E	1.325	1.00
160_K	178_E	1.320	1.00
88_S	91_R	1.318	1.00
65_I	68_A	1.314	1.00
235_K	239_V	1.313	1.00
193_E	197_L	1.306	1.00
55_Q	59_Q	1.302	1.00
246_E	250_G	1.302	1.00
211_N	215_E	1.300	1.00
159_L	162_I	1.299	1.00
268_S	366_L	1.298	1.00
257_V	373_K	1.297	1.00
191_Q	199_H	1.290	1.00
39_K	55_Q	1.285	1.00
99_H	102_E	1.281	1.00
285_Q	348_N	1.277	1.00
59_Q	63_V	1.273	1.00
109_D	113_I	1.268	1.00
351_T	355_I	1.268	1.00
94_Q	98_R	1.268	1.00
275_E	356_V	1.264	1.00
272_I	363_V	1.262	1.00
113_I	117_N	1.261	1.00
283_A	353_I	1.260	1.00
53_Q	56_P	1.260	1.00
389_K	393_E	1.260	1.00
379_R	383_E	1.259	1.00
285_Q	341_T	1.259	1.00
164_A	177_L	1.257	1.00
244_V	388_M	1.256	1.00
107_V	110_D	1.247	1.00
263_N	267_T	1.245	1.00
37_Q	40_M	1.240	1.00
183_E	186_Q	1.239	1.00
308_S	326_N	1.239	1.00
273_E	364_N	1.237	1.00
132_W	136_A	1.234	1.00
390_I	393_E	1.233	1.00
185_N	192_E	1.230	1.00
209_I	213_F	1.230	1.00
252_K	256_E	1.226	1.00
194_K	197_L	1.220	1.00
176_V	192_E	1.220	1.00
382_D	386_H	1.219	1.00
275_E	359_H	1.212	1.00
265_I	367_V	1.205	1.00
153_T	157_E	1.202	1.00
252_K	382_D	1.201	1.00
182_S	185_N	1.194	1.00
117_N	121_S	1.192	1.00
191_Q	195_K	1.192	1.00
184_Y	191_Q	1.181	1.00
404_A	407_G	1.180	1.00
264_K	267_T	1.179	1.00
284_Q	354_N	1.172	1.00
294_T	298_E	1.171	1.00
262_M	370_S	1.168	1.00
261_Q	369_E	1.167	1.00
162_I	166_T	1.163	1.00
425_S	428_I	1.162	1.00
45_D	49_Y	1.161	1.00
44_G	47_E	1.155	1.00
39_K	42_R	1.150	1.00
108_I	112_F	1.149	1.00
205_T	209_I	1.144	1.00
262_M	265_I	1.140	1.00
195_K	199_H	1.138	1.00
130_P	133_Y	1.130	1.00
168_I	191_Q	1.126	1.00
272_I	359_H	1.125	1.00
253_K	256_E	1.124	1.00
56_P	60_E	1.124	1.00
126_I	129_L	1.121	1.00
247_K	383_E	1.119	1.00
240_T	244_V	1.117	1.00
211_N	214_S	1.115	1.00
166_T	190_E	1.113	1.00
348_N	352_Q	1.112	1.00
184_Y	195_K	1.112	1.00
172_E	175_L	1.109	1.00
83_I	87_S	1.101	1.00
163_K	166_T	1.100	1.00
256_E	260_K	1.100	1.00
282_I	285_Q	1.097	1.00
414_R	418_H	1.096	1.00
197_L	200_Q	1.095	1.00
162_I	187_T	1.095	1.00
161_A	188_R	1.092	1.00
276_M	357_S	1.090	1.00
155_Q	159_L	1.088	1.00
237_G	395_S	1.083	1.00
119_I	123_H	1.083	1.00
214_S	218_R	1.081	1.00
421_A	425_S	1.080	1.00
184_Y	188_R	1.075	1.00
160_K	163_K	1.075	1.00
166_T	187_T	1.073	1.00
261_Q	366_L	1.067	1.00
161_A	184_Y	1.063	1.00
358_K	361_K	1.057	1.00
64_N	68_A	1.057	1.00
184_Y	192_E	1.054	1.00
292_I	338_T	1.053	1.00
254_E	376_Q	1.051	1.00
204_E	208_S	1.051	1.00
242_S	396_G	1.051	1.00
268_S	271_Q	1.050	1.00
49_Y	52_E	1.049	1.00
379_R	382_D	1.049	1.00
160_K	164_A	1.048	1.00
68_A	88_S	1.047	1.00
54_L	58_I	1.045	1.00
67_D	70_Y	1.043	1.00
283_A	349_T	1.043	1.00
400_V	403_Q	1.039	1.00
326_N	329_R	1.039	1.00
128_L	132_W	1.037	1.00
78_S	82_I	1.034	1.00
143_S	146_D	1.031	1.00
337_K	340_S	1.027	1.00
50_V	53_Q	1.022	1.00
308_S	329_R	1.014	1.00
179_A	189_D	1.012	1.00
63_V	67_D	1.010	1.00
163_K	167_K	1.009	1.00
276_M	360_I	1.009	1.00
104_F	107_V	1.008	1.00
161_A	165_T	1.002	1.00
341_T	344_E	0.996	1.00
95_T	99_H	0.995	1.00
280_D	284_Q	0.991	1.00
148_Y	152_I	0.990	1.00
393_E	397_K	0.987	1.00
97_K	101_Q	0.986	1.00
280_D	354_N	0.986	1.00
248_S	385_V	0.985	1.00
93_K	97_K	0.983	1.00
269_L	367_V	0.983	1.00
218_R	222_E	0.982	1.00
130_P	134_M	0.982	1.00
95_T	98_R	0.979	1.00
106_G	109_D	0.977	1.00
246_E	249_I	0.975	1.00
221_Q	413_S	0.971	1.00
260_K	263_N	0.969	1.00
38_L	41_V	0.961	1.00
204_E	207_G	0.959	1.00
248_S	251_G	0.957	1.00
410_Q	413_S	0.955	1.00
277_V	280_D	0.953	1.00
57_L	99_H	0.952	1.00
279_L	349_T	0.950	1.00
271_Q	359_H	0.949	1.00
192_E	198_L	0.946	1.00
386_H	390_I	0.946	1.00
118_R	122_I	0.939	1.00
340_S	343_S	0.939	1.00
91_R	95_T	0.936	1.00
57_L	60_E	0.936	1.00
142_L	146_D	0.934	1.00
396_G	400_V	0.931	1.00
232_Q	236_A	0.929	1.00
102_E	105_A	0.927	1.00
139_E	142_L	0.923	1.00
344_E	348_N	0.923	1.00
91_R	94_Q	0.917	1.00
344_E	347_N	0.917	1.00
66_V	70_Y	0.916	1.00
109_D	112_F	0.914	1.00
261_Q	373_K	0.912	1.00
407_G	411_E	0.911	1.00
84_N	88_S	0.910	1.00
400_V	404_A	0.908	1.00
230_I	244_V	0.907	1.00
410_Q	414_R	0.906	1.00
184_Y	198_L	0.906	1.00
404_A	408_G	0.905	1.00
192_E	199_H	0.899	1.00
58_I	96_L	0.898	1.00
424_D	428_I	0.898	1.00
165_T	187_T	0.897	1.00
191_Q	196_N	0.896	1.00
278_K	355_I	0.895	1.00
372_E	375_T	0.895	1.00
340_S	344_E	0.893	1.00
403_Q	407_G	0.893	1.00
42_R	51_L	0.891	1.00
355_I	358_K	0.887	1.00
77_S	81_D	0.885	1.00
46_A	50_V	0.885	1.00
72_N	80_M	0.882	1.00
225_D	228_E	0.877	1.00
167_K	170_N	0.875	1.00
42_R	48_L	0.875	1.00
232_Q	235_K	0.866	1.00
278_K	282_I	0.863	1.00
93_K	96_L	0.861	1.00
96_L	99_H	0.861	1.00
56_P	59_Q	0.859	1.00
115_K	119_I	0.858	1.00
334_D	341_T	0.852	1.00
164_A	188_R	0.850	1.00
222_E	225_D	0.849	1.00
190_E	194_K	0.848	1.00
289_I	338_T	0.846	1.00
264_K	268_S	0.845	1.00
177_L	189_D	0.843	1.00
390_I	394_Q	0.842	1.00
186_Q	189_D	0.839	1.00
159_L	163_K	0.839	1.00
285_Q	345_L	0.833	1.00
332_S	335_T	0.831	1.00
90_D	93_K	0.829	1.00
201_K	204_E	0.827	1.00
247_K	250_G	0.825	1.00
190_E	193_E	0.822	1.00
60_E	64_N	0.821	1.00
117_N	120_A	0.818	1.00
284_Q	288_K	0.816	1.00
61_N	65_I	0.814	1.00
72_N	77_S	0.812	1.00
223_L	234_S	0.810	1.00
114_E	117_N	0.810	1.00
50_V	106_G	0.809	1.00
182_S	186_Q	0.808	1.00
178_E	189_D	0.801	1.00
73_L	76_E	0.800	1.00
64_N	67_D	0.800	1.00
414_R	417_S	0.799	1.00
289_I	345_L	0.797	1.00
219_S	222_E	0.795	1.00
373_K	376_Q	0.795	1.00
47_E	50_V	0.795	1.00
295_G	298_E	0.794	1.00
294_T	339_V	0.790	1.00
191_Q	194_K	0.788	1.00
350_N	354_N	0.788	1.00
393_E	396_G	0.784	1.00
218_R	221_Q	0.784	1.00
179_A	186_Q	0.783	1.00
367_V	370_S	0.781	1.00
197_L	201_K	0.780	1.00
208_S	212_L	0.776	1.00
421_A	424_D	0.772	1.00
206_S	209_I	0.771	1.00
398_I	401_D	0.770	1.00
92_L	95_T	0.766	1.00
179_A	185_N	0.766	1.00
223_L	226_K	0.765	1.00
203_Q	209_I	0.763	1.00
184_Y	199_H	0.761	1.00
38_L	47_E	0.760	1.00
126_I	130_P	0.760	1.00
38_L	42_R	0.759	1.00
164_A	175_L	0.757	1.00
255_L	377_I	0.756	1.00
228_E	232_Q	0.755	1.00
116_R	119_I	0.753	1.00
353_I	357_S	0.753	1.00
426_L	429_L	0.749	1.00
156_Q	160_K	0.744	1.00
290_F	294_T	0.742	1.00
353_I	356_V	0.742	1.00
251_G	381_F	0.742	1.00
207_G	211_N	0.739	1.00
230_I	233_A	0.737	1.00
175_L	179_A	0.736	1.00
270_V	364_N	0.734	1.00
283_A	289_I	0.734	1.00
273_E	361_K	0.733	1.00
157_E	181_Q	0.733	1.00
98_R	101_Q	0.733	1.00
134_M	138_Q	0.731	1.00
317_H	328_V	0.728	1.00
185_N	199_H	0.728	1.00
94_Q	97_K	0.727	1.00
191_Q	198_L	0.726	1.00
298_E	309_I	0.725	1.00
366_L	369_E	0.723	1.00
188_R	191_Q	0.721	1.00
234_S	237_G	0.718	1.00
119_I	122_I	0.714	1.00
69_F	89_V	0.711	1.00
158_L	181_Q	0.710	1.00
223_L	237_G	0.708	1.00
79_L	82_I	0.707	1.00
241_S	244_V	0.706	1.00
92_L	96_L	0.705	1.00
164_A	167_K	0.702	1.00
259_Q	263_N	0.701	1.00
219_S	223_L	0.700	1.00
222_E	408_G	0.689	1.00
399_D	402_L	0.685	1.00
44_G	48_L	0.684	1.00
411_E	415_A	0.683	1.00
167_K	191_Q	0.678	1.00
89_V	97_K	0.675	1.00
420_A	424_D	0.675	1.00
238_T	241_S	0.674	1.00
295_G	334_D	0.673	1.00
216_T	220_V	0.671	1.00
110_D	113_I	0.668	1.00
65_I	69_F	0.666	1.00
286_I	346_V	0.664	1.00
209_I	212_L	0.664	1.00
301_N	329_R	0.662	1.00
58_I	62_I	0.661	1.00
269_L	363_V	0.659	1.00
424_D	427_V	0.658	1.00
228_E	410_Q	0.655	1.00
348_N	351_T	0.654	1.00
64_N	71_K	0.653	1.00
47_E	107_V	0.647	1.00
127_G	131_K	0.647	1.00
258_Q	377_I	0.646	1.00
291_G	294_T	0.645	1.00
61_N	76_E	0.644	1.00
139_E	146_D	0.644	1.00
136_A	139_E	0.643	1.00
114_E	118_R	0.643	1.00
223_L	409_L	0.643	1.00
76_E	79_L	0.642	1.00
364_N	368_S	0.640	1.00
287_E	290_F	0.638	1.00
108_I	111_E	0.638	1.00
69_F	73_L	0.637	1.00
173_Q	195_K	0.637	1.00
289_I	335_T	0.635	1.00
254_E	257_V	0.634	1.00
129_L	132_W	0.633	1.00
227_S	234_S	0.632	1.00
210_A	214_S	0.631	1.00
159_L	183_E	0.630	1.00
216_T	219_S	0.629	1.00
96_L	103_M	0.627	1.00
179_A	182_S	0.625	1.00
425_S	429_L	0.625	1.00
157_E	182_S	0.624	1.00
289_I	292_I	0.623	1.00
76_E	80_M	0.623	1.00
206_S	213_F	0.622	1.00
213_F	216_T	0.620	1.00
413_S	417_S	0.616	1.00
105_A	108_I	0.616	1.00
416_V	420_A	0.616	1.00
349_T	353_I	0.615	1.00
39_K	51_L	0.615	1.00
72_N	75_H	0.614	1.00
188_R	192_E	0.613	1.00
184_Y	189_D	0.612	1.00
58_I	61_N	0.612	1.00
223_L	244_V	0.612	1.00
101_Q	104_F	0.611	1.00
257_V	369_E	0.610	1.00
133_Y	136_A	0.609	1.00
168_I	188_R	0.606	1.00
79_L	83_I	0.606	1.00
187_T	192_E	0.605	1.00
156_Q	159_L	0.601	1.00
326_N	330_K	0.601	1.00
234_S	244_V	0.601	1.00
115_K	118_R	0.600	1.00
42_R	55_Q	0.599	1.00
223_L	227_S	0.599	1.00
302_L	309_I	0.598	1.00
289_I	346_V	0.598	1.00
66_V	69_F	0.598	1.00
43_L	47_E	0.596	1.00
93_K	107_V	0.596	1.00
155_Q	181_Q	0.596	1.00
185_N	195_K	0.595	1.00
256_E	378_N	0.595	1.00
336_K	340_S	0.594	1.00
139_E	143_S	0.593	1.00
157_E	160_K	0.593	1.00
53_Q	99_H	0.593	1.00
177_L	185_N	0.593	1.00
107_V	111_E	0.592	1.00
351_T	354_N	0.591	1.00
363_V	367_V	0.590	1.00
201_K	205_T	0.589	1.00
189_D	199_H	0.589	1.00
85_D	91_R	0.588	1.00
85_D	88_S	0.587	1.00
89_V	96_L	0.587	1.00
102_E	106_G	0.586	1.00
165_T	168_I	0.585	1.00
181_Q	187_T	0.585	1.00
171_L	195_K	0.585	1.00
308_S	334_D	0.581	1.00
170_N	190_E	0.580	1.00
131_K	135_G	0.578	1.00
334_D	337_K	0.574	1.00
136_A	143_S	0.573	1.00
72_N	84_N	0.573	1.00
158_L	184_Y	0.573	1.00
379_R	386_H	0.573	1.00
243_T	247_K	0.573	1.00
263_N	371_K	0.573	1.00
138_Q	142_L	0.572	1.00
288_K	341_T	0.570	1.00
290_F	343_S	0.570	1.00
162_I	165_T	0.570	1.00
227_S	402_L	0.567	1.00
275_E	352_Q	0.565	1.00
165_T	184_Y	0.561	1.00
264_K	362_D	0.559	1.00
96_L	100_I	0.559	1.00
121_S	124_L	0.558	1.00
420_A	423_V	0.558	1.00
268_S	359_H	0.558	1.00
269_L	360_I	0.557	1.00
391_S	395_S	0.557	1.00
221_Q	225_D	0.555	1.00
288_K	292_I	0.554	1.00
171_L	191_Q	0.553	1.00
160_K	179_A	0.551	1.00
50_V	102_E	0.551	1.00
57_L	95_T	0.551	1.00
80_M	83_I	0.547	0.99
173_Q	199_H	0.546	0.99
279_L	289_I	0.543	0.99
189_D	196_N	0.540	0.99
198_L	202_I	0.540	0.99
251_G	255_L	0.539	0.99
54_L	96_L	0.539	0.99
202_I	206_S	0.538	0.99
57_L	61_N	0.537	0.99
361_K	364_N	0.537	0.99
157_E	161_A	0.533	0.99
70_Y	76_E	0.532	0.99
81_D	84_N	0.531	0.99
237_G	241_S	0.529	0.99
271_Q	275_E	0.523	0.99
294_T	340_S	0.522	0.99
304_S	329_R	0.522	0.99
63_V	66_V	0.521	0.99
149_E	152_I	0.521	0.99
357_S	361_K	0.519	0.99
122_I	125_R	0.519	0.99
200_Q	204_E	0.519	0.99
273_E	277_V	0.518	0.99
398_I	405_F	0.517	0.99
61_N	68_A	0.517	0.99
154_N	158_L	0.517	0.99
397_K	401_D	0.516	0.99
84_N	87_S	0.515	0.99
187_T	195_K	0.513	0.99
273_E	360_I	0.513	0.99
269_L	272_I	0.511	0.99
283_A	350_N	0.511	0.99
185_N	188_R	0.511	0.99
169_L	190_E	0.510	0.99
251_G	377_I	0.510	0.99
86_H	90_D	0.509	0.99
226_K	408_G	0.509	0.99
60_E	92_L	0.508	0.99
279_L	353_I	0.508	0.99
422_S	426_L	0.507	0.99
295_G	330_K	0.505	0.99
168_I	171_L	0.505	0.99
103_M	107_V	0.504	0.99
262_M	371_K	0.504	0.99
252_K	378_N	0.501	0.99
122_I	126_I	0.501	0.99
160_K	180_F	0.500	0.99
298_E	336_K	0.500	0.99
86_H	89_V	0.500	0.99
271_Q	355_I	0.500	0.99
38_L	107_V	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3zx6A	2	0.6505	100	0.347	Contact Map
1qu7A	2	0.4954	100	0.458	Contact Map
2ch7A	2	0.6227	100	0.468	Contact Map
3g67A	2	0.4931	100	0.52	Contact Map
4i3mA	2	0.331	99.9	0.729	Contact Map
2f95B	2	0.1227	98.3	0.875	Contact Map
4cq4A	4	0.1921	98.1	0.884	Contact Map
4gycB	2	0.1412	98	0.886	Contact Map
3zccA	2	0.2338	97.9	0.889	Contact Map
4i5sA	2	0.6019	97.5	0.898	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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