GLTT - BACSU - GREMLIN Contacts

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GLTT - Proton/sodium-glutamate symport protein

UniProt:	O07605	Sequences: MKRIKFGLATQIFVGLILGVIVGVIWYGNPALPTYLQPIGDLFLRLIKMIVIPIVVSSLIIGVAGAGNGKQVGKLGFRTILYFEIITTFAIILGLALANIFHPGTGVNIHEAQKSDISQYVETEKEQSNKSVAETFLHIVPTNFFQSLVEGDLLAIICFTVLFALGISAIGERGKPVLAFFEGVSHAMFHVVNLVMKVAPFGVFALIGVTVSKFGLGSLISLGKLVGLVYVALAFFLIVIFGIVAKIAGISIFKFLAYMKDEILLAFSTSSSETVLPRIMEKMEKIGCPKGIVSFVIPIGYTFNLDGSVLYQSIAALFLAQVYGIDLTIWHQITLVLVLMVTSKGMAAVPGTSFVVLLATLGTIGVPAEGLAFIAGVDRIMDMARTVVNLTGNALAAVVMSKWEGMFNPAKAETVMSQSKTEQNATISG	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	429 (392)
Sequences:	6273 (3675)
Seq/√Len:	185.6

ECOLI - GLTP YDJN DCTA SSTT
BACSU - GLTT DCTA GLTP TCYP
HALSA - Q9HHN5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
146_Q	150_E	4.474	1.00
175_K	179_A	3.619	1.00
99_N	332_Q	3.121	1.00
97_L	232_A	3.080	1.00
18_L	204_F	3.065	1.00
172_E	175_K	3.048	1.00
78_R	404_E	2.975	1.00
190_H	193_N	2.944	1.00
139_I	158_C	2.897	1.00
56_V	160_T	2.859	1.00
60_I	181_F	2.743	1.00
37_Q	41_D	2.735	1.00
42_L	140_V	2.661	1.00
281_E	284_E	2.657	1.00
276_L	297_I	2.612	1.00
11_Q	197_K	2.608	1.00
22_V	204_F	2.604	1.00
289_P	406_M	2.498	1.00
176_P	183_G	2.481	1.00
56_V	60_I	2.444	1.00
284_E	290_K	2.443	1.00
39_I	205_A	2.408	1.00
402_K	409_P	2.396	1.00
102_H	105_T	2.382	1.00
57_S	184_V	2.372	1.00
328_T	331_H	2.361	1.00
7_G	10_T	2.284	1.00
230_Y	384_A	2.261	1.00
289_P	401_S	2.247	1.00
163_F	187_A	2.246	1.00
263_I	391_T	2.214	1.00
227_G	231_V	2.199	1.00
86_I	244_V	2.150	1.00
82_Y	396_A	2.107	1.00
134_E	138_H	2.099	1.00
171_G	174_G	2.054	1.00
262_E	282_K	2.003	1.00
97_L	235_F	1.988	1.00
21_I	25_I	1.981	1.00
246_K	249_G	1.966	1.00
78_R	403_W	1.940	1.00
142_T	146_Q	1.925	1.00
177_V	180_F	1.881	1.00
96_A	100_I	1.878	1.00
101_F	228_L	1.870	1.00
13_F	17_I	1.860	1.00
220_I	224_K	1.859	1.00
288_C	398_V	1.855	1.00
319_L	370_G	1.850	1.00
235_F	239_V	1.828	1.00
92_I	96_A	1.824	1.00
65_G	182_E	1.820	1.00
57_S	188_M	1.819	1.00
233_L	384_A	1.813	1.00
176_P	179_A	1.809	1.00
283_M	394_A	1.809	1.00
98_A	317_L	1.798	1.00
15_G	204_F	1.795	1.00
152_D	155_A	1.785	1.00
281_E	285_K	1.777	1.00
378_D	385_R	1.766	1.00
177_V	183_G	1.753	1.00
167_I	187_A	1.750	1.00
77_F	81_L	1.704	1.00
169_A	190_H	1.703	1.00
50_I	195_V	1.688	1.00
103_P	321_Q	1.683	1.00
258_Y	286_I	1.652	1.00
145_F	148_L	1.648	1.00
74_K	404_E	1.640	1.00
101_F	231_V	1.622	1.00
288_C	401_S	1.620	1.00
296_V	397_A	1.613	1.00
177_V	187_A	1.611	1.00
259_M	394_A	1.607	1.00
248_A	402_K	1.607	1.00
173_R	186_H	1.606	1.00
15_G	19_G	1.605	1.00
98_A	314_I	1.569	1.00
326_D	330_W	1.555	1.00
254_K	257_A	1.540	1.00
97_L	228_L	1.533	1.00
42_L	137_L	1.520	1.00
319_L	366_V	1.495	1.00
279_I	394_A	1.485	1.00
6_F	10_T	1.476	1.00
233_L	388_V	1.469	1.00
232_A	310_L	1.466	1.00
323_Y	370_G	1.463	1.00
144_F	159_F	1.462	1.00
245_A	395_L	1.447	1.00
382_D	386_T	1.442	1.00
64_A	178_L	1.429	1.00
223_G	227_G	1.423	1.00
22_V	26_W	1.401	1.00
273_E	348_A	1.400	1.00
258_Y	285_K	1.400	1.00
263_I	387_V	1.397	1.00
238_I	242_G	1.395	1.00
145_F	149_V	1.392	1.00
10_T	14_V	1.383	1.00
48_K	142_T	1.373	1.00
280_M	293_V	1.371	1.00
401_S	407_F	1.363	1.00
166_G	191_V	1.358	1.00
180_F	183_G	1.351	1.00
169_A	194_L	1.350	1.00
55_V	153_L	1.348	1.00
63_V	161_V	1.346	1.00
138_H	152_D	1.329	1.00
108_N	324_G	1.327	1.00
228_L	314_I	1.327	1.00
61_I	181_F	1.318	1.00
56_V	148_L	1.317	1.00
45_R	142_T	1.311	1.00
41_D	45_R	1.308	1.00
329_I	333_I	1.308	1.00
182_E	186_H	1.300	1.00
49_M	159_F	1.281	1.00
253_F	257_A	1.278	1.00
140_V	158_C	1.265	1.00
176_P	180_F	1.261	1.00
170_I	174_G	1.253	1.00
289_P	292_I	1.252	1.00
16_L	207_I	1.249	1.00
251_S	254_K	1.247	1.00
237_L	388_V	1.243	1.00
244_V	399_V	1.242	1.00
6_F	14_V	1.242	1.00
167_I	177_V	1.237	1.00
302_T	305_L	1.237	1.00
292_I	401_S	1.236	1.00
401_S	405_G	1.234	1.00
79_T	296_V	1.232	1.00
259_M	391_T	1.232	1.00
30_P	212_S	1.228	1.00
95_L	332_Q	1.223	1.00
31_A	34_T	1.221	1.00
194_L	198_V	1.211	1.00
163_F	184_V	1.210	1.00
221_S	224_K	1.203	1.00
316_A	335_L	1.203	1.00
131_S	134_E	1.193	1.00
279_I	297_I	1.192	1.00
26_W	32_L	1.185	1.00
166_G	194_L	1.181	1.00
50_I	192_V	1.181	1.00
226_V	377_V	1.180	1.00
209_V	213_K	1.175	1.00
326_D	331_H	1.173	1.00
224_K	227_G	1.145	1.00
266_A	386_T	1.140	1.00
37_Q	209_V	1.138	1.00
188_M	192_V	1.135	1.00
245_A	250_I	1.122	1.00
193_N	281_E	1.113	1.00
108_N	112_A	1.109	1.00
162_L	191_V	1.108	1.00
52_I	156_I	1.103	1.00
239_V	242_G	1.101	1.00
83_F	296_V	1.101	1.00
146_Q	149_V	1.099	1.00
161_V	165_L	1.095	1.00
71_Q	291_G	1.095	1.00
11_Q	15_G	1.093	1.00
250_I	407_F	1.091	1.00
175_K	178_L	1.089	1.00
261_D	285_K	1.085	1.00
255_F	259_M	1.084	1.00
81_L	85_I	1.076	1.00
21_I	24_V	1.073	1.00
311_Y	378_D	1.070	1.00
335_L	364_I	1.070	1.00
170_I	183_G	1.069	1.00
92_I	336_V	1.064	1.00
96_A	99_N	1.060	1.00
276_L	301_Y	1.059	1.00
85_I	89_F	1.053	1.00
275_V	279_I	1.053	1.00
306_D	343_S	1.051	1.00
57_S	61_I	1.049	1.00
42_L	46_L	1.049	1.00
354_F	375_A	1.045	1.00
177_V	181_F	1.044	1.00
86_I	306_D	1.042	1.00
39_I	198_V	1.042	1.00
59_L	157_I	1.042	1.00
401_S	406_M	1.039	1.00
198_V	201_F	1.038	1.00
249_G	402_K	1.034	1.00
108_N	111_E	1.031	1.00
279_I	390_L	1.031	1.00
283_M	297_I	1.025	1.00
30_P	33_P	1.010	0.99
270_S	379_R	1.009	0.99
311_Y	385_R	1.007	0.99
111_E	114_K	1.007	0.99
236_F	240_I	1.007	0.99
179_A	183_G	1.006	0.99
288_C	293_V	0.997	0.99
84_E	88_T	0.996	0.99
127_Q	130_K	0.993	0.99
75_L	292_I	0.992	0.99
170_I	187_A	0.987	0.99
88_T	92_I	0.986	0.99
333_I	337_L	0.984	0.99
308_S	353_S	0.984	0.99
283_M	288_C	0.978	0.99
246_K	251_S	0.975	0.99
104_G	321_Q	0.974	0.99
236_F	310_L	0.973	0.99
68_N	71_Q	0.966	0.99
179_A	182_E	0.963	0.99
171_G	175_K	0.962	0.99
241_F	244_V	0.958	0.99
158_C	162_L	0.957	0.99
94_G	313_S	0.956	0.99
304_N	393_N	0.953	0.99
92_I	333_I	0.953	0.99
22_V	208_G	0.950	0.99
226_V	380_I	0.948	0.99
224_K	321_Q	0.942	0.99
97_L	101_F	0.940	0.99
257_A	260_K	0.934	0.99
402_K	405_G	0.933	0.99
30_P	35_Y	0.926	0.99
45_R	48_K	0.925	0.99
40_G	206_L	0.923	0.99
250_I	254_K	0.923	0.99
329_I	332_Q	0.922	0.99
18_L	22_V	0.919	0.99
217_G	220_I	0.916	0.99
165_L	169_A	0.913	0.99
162_L	194_L	0.913	0.99
350_P	382_D	0.912	0.99
282_K	285_K	0.906	0.99
242_G	256_L	0.905	0.99
32_L	36_L	0.905	0.99
267_F	383_M	0.904	0.99
50_I	191_V	0.902	0.99
144_F	151_G	0.902	0.99
243_I	246_K	0.899	0.99
258_Y	262_E	0.898	0.99
258_Y	282_K	0.891	0.99
17_I	21_I	0.891	0.99
30_P	34_T	0.890	0.99
190_H	194_L	0.889	0.99
317_L	332_Q	0.889	0.99
22_V	36_L	0.887	0.99
174_G	183_G	0.887	0.99
135_T	141_P	0.885	0.99
312_Q	357_L	0.885	0.99
342_T	360_T	0.882	0.99
95_L	99_N	0.880	0.99
144_F	149_V	0.875	0.99
134_E	137_L	0.873	0.99
311_Y	381_M	0.873	0.99
32_L	35_Y	0.868	0.98
208_G	212_S	0.868	0.98
74_K	78_R	0.867	0.98
275_V	278_R	0.866	0.98
239_V	243_I	0.866	0.98
305_L	393_N	0.862	0.98
231_V	235_F	0.862	0.98
93_L	235_F	0.862	0.98
147_S	159_F	0.861	0.98
272_S	389_N	0.859	0.98
132_V	136_F	0.856	0.98
231_V	234_A	0.856	0.98
128_S	131_S	0.855	0.98
229_V	381_M	0.850	0.98
220_I	223_G	0.850	0.98
240_I	244_V	0.850	0.98
163_F	191_V	0.848	0.98
140_V	143_N	0.848	0.98
242_G	246_K	0.847	0.98
265_L	275_V	0.847	0.98
262_E	279_I	0.847	0.98
57_S	181_F	0.847	0.98
60_I	167_I	0.844	0.98
229_V	314_I	0.841	0.98
193_N	197_K	0.841	0.98
241_F	245_A	0.840	0.98
131_S	135_T	0.840	0.98
90_A	236_F	0.836	0.98
226_V	381_M	0.831	0.98
354_F	371_L	0.826	0.98
283_M	293_V	0.825	0.98
230_Y	234_A	0.825	0.98
138_H	141_P	0.824	0.98
160_T	164_A	0.824	0.98
133_A	137_L	0.823	0.98
61_I	182_E	0.821	0.98
130_K	138_H	0.820	0.98
260_K	264_L	0.816	0.98
137_L	141_P	0.814	0.98
185_S	189_F	0.812	0.98
109_I	112_A	0.812	0.98
7_G	11_Q	0.808	0.98
358_L	371_L	0.807	0.98
36_L	208_G	0.805	0.97
130_K	134_E	0.804	0.97
301_Y	393_N	0.801	0.97
292_I	296_V	0.800	0.97
94_G	314_I	0.800	0.97
262_E	275_V	0.795	0.97
255_F	394_A	0.795	0.97
265_L	278_R	0.789	0.97
225_L	314_I	0.787	0.97
35_Y	38_P	0.786	0.97
159_F	163_F	0.784	0.97
41_D	137_L	0.783	0.97
265_L	269_T	0.782	0.97
31_A	35_Y	0.779	0.97
303_F	344_K	0.779	0.97
167_I	181_F	0.777	0.97
60_I	163_F	0.775	0.97
26_W	36_L	0.775	0.97
226_V	230_Y	0.775	0.97
70_K	73_G	0.774	0.97
174_G	178_L	0.772	0.97
22_V	32_L	0.772	0.97
26_W	208_G	0.772	0.97
315_A	374_I	0.771	0.97
402_K	407_F	0.770	0.97
6_F	11_Q	0.769	0.97
36_L	205_A	0.768	0.97
60_I	160_T	0.766	0.97
40_G	202_G	0.765	0.97
327_L	331_H	0.764	0.97
135_T	138_H	0.762	0.96
204_F	208_G	0.760	0.96
144_F	147_S	0.759	0.96
401_S	408_N	0.758	0.96
97_L	231_V	0.756	0.96
75_L	400_M	0.754	0.96
234_A	238_I	0.749	0.96
143_N	159_F	0.747	0.96
43_F	198_V	0.746	0.96
225_L	381_M	0.745	0.96
316_A	360_T	0.741	0.96
66_A	75_L	0.739	0.96
12_I	199_A	0.738	0.96
262_E	278_R	0.738	0.96
102_H	321_Q	0.734	0.96
270_S	382_D	0.734	0.96
180_F	184_V	0.733	0.96
255_F	398_V	0.733	0.96
199_A	202_G	0.732	0.96
43_F	199_A	0.730	0.96
225_L	311_Y	0.730	0.96
358_L	362_G	0.729	0.95
45_R	138_H	0.729	0.95
19_G	208_G	0.728	0.95
46_L	140_V	0.726	0.95
97_L	100_I	0.726	0.95
124_E	127_Q	0.723	0.95
312_Q	354_F	0.721	0.95
108_N	114_K	0.720	0.95
58_S	185_S	0.720	0.95
354_F	381_M	0.716	0.95
81_L	84_E	0.716	0.95
323_Y	369_E	0.714	0.95
245_A	248_A	0.710	0.95
64_A	168_S	0.708	0.95
71_Q	74_K	0.708	0.95
148_L	159_F	0.707	0.95
279_I	393_N	0.706	0.95
228_L	231_V	0.704	0.95
35_Y	39_I	0.697	0.94
158_C	198_V	0.697	0.94
232_A	314_I	0.697	0.94
299_I	303_F	0.697	0.94
163_F	177_V	0.695	0.94
290_K	294_S	0.694	0.94
74_K	77_F	0.694	0.94
203_V	350_P	0.691	0.94
126_E	129_N	0.691	0.94
201_F	205_A	0.689	0.94
148_L	155_A	0.687	0.94
110_H	113_Q	0.687	0.94
254_K	258_Y	0.686	0.94
225_L	374_I	0.686	0.94
88_T	340_M	0.685	0.94
266_A	390_L	0.683	0.94
11_Q	201_F	0.681	0.94
16_L	203_V	0.680	0.93
316_A	320_A	0.680	0.93
188_M	195_V	0.679	0.93
137_L	140_V	0.679	0.93
406_M	409_P	0.678	0.93
330_W	333_I	0.678	0.93
339_L	356_V	0.677	0.93
34_T	212_S	0.675	0.93
229_V	233_L	0.675	0.93
175_K	180_F	0.673	0.93
308_S	346_M	0.672	0.93
320_A	325_I	0.666	0.93
93_L	232_A	0.665	0.93
308_S	312_Q	0.665	0.93
143_N	147_S	0.663	0.93
69_G	165_L	0.662	0.93
94_G	310_L	0.662	0.93
86_I	90_A	0.661	0.93
172_E	179_A	0.660	0.92
79_T	400_M	0.660	0.92
222_L	225_L	0.659	0.92
237_L	242_G	0.659	0.92
31_A	212_S	0.659	0.92
199_A	269_T	0.657	0.92
334_T	364_I	0.657	0.92
32_L	212_S	0.655	0.92
171_G	178_L	0.654	0.92
170_I	186_H	0.653	0.92
250_I	258_Y	0.651	0.92
182_E	185_S	0.650	0.92
124_E	128_S	0.649	0.92
103_P	106_G	0.645	0.92
346_M	356_V	0.645	0.92
250_I	408_N	0.645	0.92
33_P	212_S	0.644	0.92
135_T	139_I	0.643	0.91
83_F	396_A	0.640	0.91
60_I	184_V	0.637	0.91
183_G	186_H	0.636	0.91
247_I	399_V	0.635	0.91
106_G	109_I	0.631	0.91
338_V	363_T	0.631	0.91
301_Y	305_L	0.627	0.90
186_H	190_H	0.626	0.90
330_W	334_T	0.626	0.90
99_N	329_I	0.623	0.90
173_R	179_A	0.622	0.90
332_Q	336_V	0.621	0.90
297_I	397_A	0.620	0.90
39_I	201_F	0.620	0.90
305_L	346_M	0.619	0.90
177_V	184_V	0.618	0.90
68_N	76_G	0.617	0.90
46_L	162_L	0.614	0.90
225_L	233_L	0.611	0.89
174_G	187_A	0.610	0.89
312_Q	346_M	0.608	0.89
83_F	236_F	0.607	0.89
157_I	323_Y	0.606	0.89
110_H	114_K	0.605	0.89
136_F	140_V	0.604	0.89
106_G	224_K	0.604	0.89
313_S	339_L	0.604	0.89
71_Q	76_G	0.604	0.89
83_F	393_N	0.601	0.89
348_A	351_G	0.600	0.88
42_L	158_C	0.600	0.88
365_G	369_E	0.597	0.88
397_A	401_S	0.597	0.88
52_I	148_L	0.595	0.88
255_F	286_I	0.595	0.88
147_S	151_G	0.595	0.88
286_I	398_V	0.594	0.88
344_K	393_N	0.594	0.88
348_A	352_T	0.594	0.88
399_V	403_W	0.593	0.88
69_G	76_G	0.593	0.88
326_D	329_I	0.592	0.88
87_T	309_V	0.592	0.88
289_P	293_V	0.592	0.88
336_V	339_L	0.591	0.88
46_L	195_V	0.590	0.88
84_E	344_K	0.589	0.88
370_G	373_F	0.589	0.88
54_I	157_I	0.589	0.88
14_V	18_L	0.588	0.87
312_Q	316_A	0.587	0.87
192_V	267_F	0.587	0.87
242_G	245_A	0.586	0.87
183_G	187_A	0.585	0.87
334_T	338_V	0.584	0.87
89_F	92_I	0.584	0.87
61_I	178_L	0.584	0.87
343_S	355_V	0.583	0.87
19_G	23_G	0.582	0.87
236_F	306_D	0.582	0.87
369_E	372_A	0.581	0.87
287_G	408_N	0.581	0.87
102_H	317_L	0.580	0.87
46_L	198_V	0.579	0.87
257_A	261_D	0.579	0.87
225_L	315_A	0.579	0.87
22_V	25_I	0.578	0.87
323_Y	367_P	0.578	0.87
306_D	392_G	0.578	0.87
167_I	178_L	0.577	0.86
93_L	240_I	0.577	0.86
49_M	191_V	0.575	0.86
288_C	397_A	0.574	0.86
259_M	279_I	0.574	0.86
190_H	197_K	0.573	0.86
204_F	215_G	0.572	0.86
126_E	130_K	0.572	0.86
202_G	206_L	0.572	0.86
170_I	173_R	0.570	0.86
170_I	190_H	0.568	0.86
353_S	360_T	0.567	0.85
278_R	281_E	0.566	0.85
280_M	297_I	0.564	0.85
71_Q	406_M	0.564	0.85
97_L	227_G	0.563	0.85
77_F	80_I	0.562	0.85
273_E	301_Y	0.561	0.85
26_W	31_A	0.560	0.85
95_L	336_V	0.559	0.85
125_K	128_S	0.555	0.84
315_A	378_D	0.555	0.84
108_N	113_Q	0.555	0.84
15_G	223_G	0.554	0.84
270_S	274_T	0.554	0.84
54_I	188_M	0.553	0.84
15_G	208_G	0.553	0.84
346_M	353_S	0.553	0.84
275_V	390_L	0.553	0.84
90_A	310_L	0.551	0.84
292_I	406_M	0.551	0.84
99_N	317_L	0.550	0.84
61_I	65_G	0.549	0.84
246_K	252_I	0.549	0.84
66_A	397_A	0.548	0.84
224_K	228_L	0.547	0.83
336_V	340_M	0.547	0.83
238_I	243_I	0.547	0.83
178_L	182_E	0.546	0.83
275_V	301_Y	0.545	0.83
291_G	406_M	0.543	0.83
167_I	183_G	0.543	0.83
266_A	382_D	0.543	0.83
242_G	252_I	0.542	0.83
83_F	300_G	0.541	0.83
327_L	335_L	0.540	0.83
166_G	170_I	0.540	0.83
199_A	203_V	0.539	0.83
405_G	409_P	0.539	0.83
216_L	220_I	0.536	0.82
19_G	207_I	0.536	0.82
16_L	383_M	0.535	0.82
51_V	352_T	0.535	0.82
266_A	387_V	0.534	0.82
101_F	224_K	0.533	0.82
196_M	199_A	0.533	0.82
335_L	339_L	0.533	0.82
89_F	93_L	0.532	0.82
358_L	368_A	0.532	0.82
246_K	253_F	0.531	0.82
316_A	319_L	0.528	0.81
8_L	11_Q	0.528	0.81
86_I	303_F	0.528	0.81
238_I	253_F	0.528	0.81
91_I	340_M	0.528	0.81
149_V	152_D	0.527	0.81
232_A	236_F	0.527	0.81
106_G	221_S	0.525	0.81
75_L	404_E	0.525	0.81
396_A	399_V	0.524	0.81
197_K	201_F	0.523	0.81
222_L	233_L	0.523	0.81
307_G	388_V	0.523	0.81
331_H	334_T	0.523	0.81
308_S	382_D	0.520	0.80
133_A	138_H	0.520	0.80
283_M	393_N	0.520	0.80
389_N	393_N	0.518	0.80
17_I	409_P	0.518	0.80
248_A	395_L	0.517	0.80
379_R	383_M	0.516	0.80
259_M	263_I	0.516	0.80
167_I	174_G	0.516	0.80
255_F	395_L	0.514	0.79
227_G	230_Y	0.513	0.79
241_F	246_K	0.510	0.79
319_L	356_V	0.510	0.79
255_F	391_T	0.510	0.79
284_E	293_V	0.509	0.79
126_E	131_S	0.506	0.78
175_K	183_G	0.506	0.78
52_I	153_L	0.503	0.78
128_S	134_E	0.502	0.78
50_I	54_I	0.501	0.78
304_N	392_G	0.501	0.78
26_W	30_P	0.500	0.78
377_V	381_M	0.500	0.78

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2nwlA	3	0.9021	100	0.08	Contact Map
3klyA	3	0.5198	37.5	0.965	Contact Map
4czbA	2	0.6317	33.8	0.966	Contact Map
4cz8A	2	0.6434	19.5	0.97	Contact Map
3nd0A	2	0.8438	16.8	0.97	Contact Map
4eneA	2	0.8788	16.6	0.97	Contact Map
3kcuA	3	0.5105	14.3	0.971	Contact Map
3zuxA	1	0.3473	11.6	0.972	Contact Map
4n7wA	2	0.3613	8.2	0.974	Contact Map
2zy9A	2	0.2354	7.7	0.975	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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