YHJP - BACSU - GREMLIN Contacts

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YHJP - Uncharacterized protein YhjP

UniProt:	O07570	Sequences: MKLIEHYVALVKTGCAEYGQMNEMTLTEIADCLFCTERNAKLILHKLENSNWIIRESGAGRGRKSKIAFLRRPEELLLQTAKEYTMSGKLKKAKELLQQYQSAFPGLQNEYNMWLSEVFGFVTETGENGAKDVLRLFITPESVSSLDPCQIFLRSEGHFVKQIFDTLFTFDSDMQEPKPHLVHGWEEVGKKQWRFFLRKGVLFHNGQPLTSRDVAFTFQRFLELADNPYKWLLHGVKQVLEKGPYCVELILDKPNALLPYALCDERLSILPAEQGGGKNGTGPFQMNQQHSGMLVLEANERYFKGRPYLDRVEFVFSEQAGEMNGFTIQEKQTCPEQQTVFDERHVQYLSLNLKKKGPLQHRSFRKALRLLISSERLVREAGGHRRIPVTSFLHPSPFEWEGVSPSELLKKSGYEGETIVLYTFSETDHREDAEWIQNICAQHGIRLTLQFCDAADLRRPEIVQMADIIHDSATFYQDSEFGFLHLLLSENSFLYQHLSEKLTQICSGMTERMFSMPDRCSRINILRDIDRQMIQELNAIPLYQNVLQVTSSKNVKGLVLDEEGWIDLYSVWLSK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	575 (448)
Sequences:	17862 (13176)
Seq/√Len:	622.5

ECOLI - YBAE SGRR OPPA MPPA DDPA SAPA YEJA YGIS GSIB DPPA NIKA
BACSU - YHJP OPPA APPA DPPE
HALSA - Q9HMI3 Q9HMW4
SULSO - Q97VF7 Q97UG7 Q97VK5 Q97UH5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
287_N	297_E	4.014	1.00
242_K	248_E	3.206	1.00
363_S	411_K	3.128	1.00
240_L	248_E	3.042	1.00
199_K	245_Y	3.037	1.00
418_T	446_R	3.006	1.00
404_S	407_E	2.984	1.00
243_G	246_C	2.872	1.00
375_E	379_R	2.835	1.00
215_A	219_Q	2.819	1.00
508_G	512_R	2.819	1.00
285_Q	297_E	2.679	1.00
516_M	521_S	2.632	1.00
357_G	360_Q	2.583	1.00
133_V	311_R	2.548	1.00
418_T	448_T	2.537	1.00
215_A	241_E	2.504	1.00
370_L	404_S	2.422	1.00
420_V	450_Q	2.407	1.00
184_G	196_F	2.363	1.00
420_V	448_T	2.362	1.00
373_S	376_R	2.349	1.00
407_E	411_K	2.326	1.00
186_E	196_F	2.323	1.00
368_L	440_C	2.253	1.00
505_I	508_G	2.249	1.00
171_D	176_E	2.219	1.00
192_Q	248_E	2.211	1.00
240_L	250_I	2.201	1.00
207_Q	273_E	2.194	1.00
362_R	366_K	2.133	1.00
209_L	281_T	2.128	1.00
441_A	446_R	2.108	1.00
363_S	366_K	2.101	1.00
192_Q	250_I	2.085	1.00
512_R	525_I	2.080	1.00
521_S	524_N	2.078	1.00
501_K	536_E	2.078	1.00
168_F	185_W	2.076	1.00
212_R	241_E	2.052	1.00
295_V	311_R	2.028	1.00
204_H	299_N	2.023	1.00
194_R	248_E	2.016	1.00
202_L	301_R	2.008	1.00
202_L	208_P	1.988	1.00
171_D	178_K	1.985	1.00
518_D	521_S	1.976	1.00
188_V	191_K	1.973	1.00
187_E	193_W	1.967	1.00
363_S	408_L	1.964	1.00
133_V	313_E	1.950	1.00
503_T	536_E	1.915	1.00
237_K	252_D	1.914	1.00
201_V	209_L	1.905	1.00
165_D	180_H	1.899	1.00
218_F	249_L	1.871	1.00
196_F	246_C	1.866	1.00
503_T	532_Q	1.852	1.00
524_N	528_D	1.846	1.00
212_R	272_A	1.839	1.00
137_F	328_I	1.836	1.00
489_S	502_L	1.836	1.00
147_D	220_R	1.827	1.00
237_K	250_I	1.795	1.00
285_Q	300_E	1.754	1.00
288_Q	293_M	1.753	1.00
288_Q	295_V	1.753	1.00
362_R	536_E	1.737	1.00
183_H	199_K	1.736	1.00
135_R	313_E	1.722	1.00
210_T	213_D	1.719	1.00
513_M	526_L	1.714	1.00
389_V	544_Q	1.703	1.00
506_C	529_I	1.700	1.00
505_I	528_D	1.696	1.00
509_M	528_D	1.695	1.00
437_Q	441_A	1.689	1.00
351_L	540_I	1.681	1.00
489_S	507_S	1.663	1.00
460_P	465_M	1.661	1.00
214_V	247_V	1.650	1.00
183_H	196_F	1.626	1.00
410_K	415_E	1.622	1.00
297_E	311_R	1.616	1.00
505_I	532_Q	1.612	1.00
371_L	443_H	1.601	1.00
531_R	535_Q	1.600	1.00
290_H	293_M	1.590	1.00
212_R	244_P	1.585	1.00
132_D	310_D	1.584	1.00
173_D	176_E	1.577	1.00
238_Q	250_I	1.572	1.00
459_R	463_V	1.572	1.00
513_M	525_I	1.571	1.00
207_Q	271_P	1.563	1.00
200_G	208_P	1.557	1.00
212_R	215_A	1.551	1.00
205_N	271_P	1.543	1.00
504_Q	508_G	1.542	1.00
188_V	192_Q	1.535	1.00
502_L	507_S	1.529	1.00
366_K	404_S	1.526	1.00
213_D	272_A	1.520	1.00
287_N	311_R	1.519	1.00
366_K	537_L	1.516	1.00
528_D	531_R	1.513	1.00
330_E	336_E	1.507	1.00
293_M	313_E	1.506	1.00
284_F	309_L	1.503	1.00
359_L	419_I	1.497	1.00
331_K	335_P	1.492	1.00
183_H	198_R	1.490	1.00
401_E	404_S	1.487	1.00
362_R	535_Q	1.478	1.00
298_A	310_D	1.477	1.00
525_I	528_D	1.460	1.00
351_L	468_I	1.458	1.00
331_K	336_E	1.455	1.00
430_R	434_E	1.453	1.00
211_S	241_E	1.447	1.00
524_N	527_R	1.446	1.00
210_T	244_P	1.442	1.00
372_I	436_I	1.434	1.00
354_K	500_E	1.428	1.00
375_E	388_P	1.407	1.00
194_R	246_C	1.406	1.00
403_V	406_S	1.406	1.00
509_M	525_I	1.393	1.00
369_R	537_L	1.386	1.00
523_I	527_R	1.384	1.00
423_T	449_L	1.384	1.00
295_V	313_E	1.347	1.00
153_L	156_E	1.345	1.00
168_F	195_F	1.339	1.00
287_N	295_V	1.334	1.00
368_L	445_I	1.328	1.00
406_S	410_K	1.321	1.00
165_D	281_T	1.318	1.00
516_M	525_I	1.302	1.00
204_H	285_Q	1.301	1.00
188_V	194_R	1.299	1.00
185_W	195_F	1.282	1.00
131_K	310_D	1.278	1.00
208_P	245_Y	1.274	1.00
512_R	521_S	1.273	1.00
378_V	388_P	1.269	1.00
165_D	303_F	1.263	1.00
215_A	239_V	1.252	1.00
521_S	525_I	1.250	1.00
242_K	246_C	1.249	1.00
532_Q	536_E	1.247	1.00
249_L	258_L	1.243	1.00
439_I	442_Q	1.243	1.00
450_Q	460_P	1.241	1.00
202_L	299_N	1.238	1.00
135_R	315_V	1.238	1.00
135_R	329_Q	1.237	1.00
196_F	245_Y	1.228	1.00
488_L	511_E	1.226	1.00
508_G	511_E	1.222	1.00
253_K	515_S	1.218	1.00
423_T	451_F	1.215	1.00
464_Q	500_E	1.210	1.00
364_F	409_L	1.210	1.00
241_E	244_P	1.209	1.00
509_M	532_Q	1.207	1.00
453_D	456_D	1.206	1.00
205_N	273_E	1.197	1.00
356_K	467_D	1.193	1.00
421_L	447_L	1.191	1.00
378_V	386_R	1.190	1.00
520_C	523_I	1.188	1.00
239_V	247_V	1.186	1.00
350_S	469_I	1.181	1.00
201_V	281_T	1.181	1.00
435_W	439_I	1.176	1.00
419_I	468_I	1.166	1.00
337_Q	553_K	1.162	1.00
366_K	408_L	1.161	1.00
505_I	509_M	1.153	1.00
438_N	442_Q	1.151	1.00
364_F	412_S	1.151	1.00
402_G	443_H	1.145	1.00
512_R	516_M	1.145	1.00
219_Q	223_E	1.143	1.00
329_Q	552_S	1.141	1.00
159_F	296_L	1.140	1.00
408_L	411_K	1.138	1.00
169_T	180_H	1.138	1.00
181_L	281_T	1.138	1.00
501_K	506_C	1.133	1.00
296_L	314_F	1.128	1.00
490_E	507_S	1.127	1.00
419_I	447_L	1.124	1.00
209_L	269_I	1.121	1.00
454_A	458_R	1.120	1.00
402_G	406_S	1.114	1.00
293_M	315_V	1.113	1.00
359_L	368_L	1.109	1.00
169_T	178_K	1.096	1.00
376_R	439_I	1.092	1.00
235_G	255_N	1.090	1.00
198_R	303_F	1.088	1.00
371_L	440_C	1.087	1.00
179_P	185_W	1.078	1.00
407_E	410_K	1.078	1.00
274_Q	278_K	1.076	1.00
193_W	258_L	1.066	1.00
204_H	301_R	1.065	1.00
567_D	570_S	1.064	1.00
437_Q	449_L	1.063	1.00
217_T	269_I	1.062	1.00
285_Q	299_N	1.059	1.00
198_R	201_V	1.059	1.00
362_R	537_L	1.057	1.00
329_Q	554_N	1.055	1.00
490_E	502_L	1.051	1.00
440_C	447_L	1.049	1.00
520_C	524_N	1.049	1.00
568_L	571_V	1.041	1.00
512_R	528_D	1.040	1.00
298_A	307_P	1.037	1.00
195_F	249_L	1.037	1.00
216_F	272_A	1.035	1.00
509_M	512_R	1.033	1.00
181_L	214_V	1.033	1.00
532_Q	535_Q	1.032	1.00
509_M	529_I	1.031	1.00
356_K	360_Q	1.024	1.00
417_E	445_I	1.024	1.00
340_V	546_V	1.008	1.00
436_I	440_C	1.004	1.00
404_S	408_L	1.001	1.00
382_G	543_Y	1.000	1.00
183_H	245_Y	0.996	1.00
214_V	269_I	0.996	1.00
130_A	308_Y	0.993	1.00
219_Q	222_L	0.992	1.00
437_Q	447_L	0.990	1.00
387_I	546_V	0.989	1.00
511_E	515_S	0.989	1.00
181_L	201_V	0.985	1.00
330_E	333_T	0.983	1.00
297_E	300_E	0.978	1.00
134_L	309_L	0.977	1.00
479_S	522_R	0.976	1.00
134_L	555_V	0.975	1.00
213_D	216_F	0.971	1.00
317_S	328_I	0.970	1.00
377_L	432_D	0.968	1.00
456_D	460_P	0.964	1.00
193_W	259_P	0.962	1.00
212_R	216_F	0.957	1.00
506_C	533_M	0.956	1.00
513_M	529_I	0.954	1.00
431_E	434_E	0.952	1.00
186_E	194_R	0.949	1.00
363_S	412_S	0.949	1.00
196_F	199_K	0.948	1.00
366_K	370_L	0.948	1.00
298_A	306_R	0.947	1.00
339_T	551_S	0.945	1.00
403_V	407_E	0.944	1.00
304_K	569_Y	0.943	1.00
378_V	543_Y	0.941	1.00
211_S	242_K	0.938	1.00
203_F	213_D	0.936	1.00
420_V	467_D	0.934	1.00
414_Y	417_E	0.934	1.00
501_K	538_N	0.930	1.00
199_K	208_P	0.930	1.00
332_Q	335_P	0.927	1.00
321_G	324_N	0.925	1.00
366_K	535_Q	0.923	1.00
166_T	268_S	0.922	1.00
402_G	442_Q	0.921	1.00
208_P	244_P	0.920	1.00
191_K	237_K	0.920	1.00
369_R	540_I	0.920	1.00
298_A	305_G	0.919	1.00
423_T	433_A	0.918	1.00
452_C	460_P	0.917	1.00
461_E	469_I	0.916	1.00
519_R	523_I	0.915	1.00
376_R	380_E	0.908	1.00
337_Q	551_S	0.908	1.00
379_R	384_H	0.906	1.00
204_H	279_N	0.905	1.00
196_F	243_G	0.904	1.00
369_R	374_S	0.903	1.00
166_T	180_H	0.902	1.00
333_T	336_E	0.900	1.00
433_A	449_L	0.899	1.00
438_N	441_A	0.897	1.00
142_S	289_Q	0.895	1.00
331_K	334_C	0.894	1.00
351_L	368_L	0.890	1.00
189_G	192_Q	0.890	1.00
191_K	250_I	0.881	1.00
506_C	510_T	0.880	1.00
129_G	132_D	0.878	1.00
193_W	251_L	0.877	1.00
168_F	177_P	0.874	1.00
258_L	262_L	0.873	1.00
361_H	414_Y	0.872	1.00
235_G	253_K	0.870	1.00
395_P	398_F	0.870	1.00
168_F	259_P	0.866	1.00
204_H	286_M	0.862	1.00
194_R	242_K	0.861	1.00
205_N	279_N	0.854	1.00
215_A	247_V	0.853	1.00
162_Q	296_L	0.850	1.00
211_S	247_V	0.844	1.00
364_F	417_E	0.844	1.00
484_L	488_L	0.843	1.00
163_I	296_L	0.839	1.00
219_Q	239_V	0.837	1.00
368_L	419_I	0.836	1.00
251_L	258_L	0.836	1.00
284_F	307_P	0.835	1.00
512_R	515_S	0.835	1.00
213_D	217_T	0.835	1.00
165_D	302_Y	0.834	1.00
132_D	309_L	0.832	1.00
204_H	280_G	0.830	1.00
374_S	388_P	0.829	1.00
527_R	531_R	0.822	1.00
350_S	499_S	0.821	1.00
506_C	532_Q	0.819	1.00
382_G	386_R	0.817	1.00
241_E	247_V	0.817	1.00
345_H	474_T	0.814	1.00
190_K	194_R	0.813	1.00
529_I	532_Q	0.812	1.00
400_W	442_Q	0.810	1.00
296_L	312_V	0.810	1.00
163_I	286_M	0.808	1.00
149_C	221_F	0.807	1.00
172_S	559_V	0.807	1.00
164_F	280_G	0.803	1.00
181_L	209_L	0.803	1.00
336_E	553_K	0.797	1.00
349_L	436_I	0.797	1.00
422_Y	452_C	0.794	1.00
510_T	529_I	0.792	1.00
320_A	324_N	0.788	1.00
128_N	308_Y	0.785	1.00
372_I	377_L	0.784	1.00
148_P	270_L	0.783	1.00
332_Q	336_E	0.783	1.00
349_L	468_I	0.780	1.00
405_P	443_H	0.779	1.00
255_N	261_A	0.776	1.00
168_F	182_V	0.776	1.00
320_A	323_M	0.775	1.00
187_E	190_K	0.771	1.00
528_D	532_Q	0.768	1.00
441_A	445_I	0.767	1.00
171_D	174_M	0.767	1.00
241_E	248_E	0.766	1.00
342_D	546_V	0.766	1.00
430_R	451_F	0.765	1.00
373_S	400_W	0.764	1.00
373_S	439_I	0.763	1.00
217_T	270_L	0.763	1.00
149_C	220_R	0.761	1.00
370_L	408_L	0.761	1.00
354_K	464_Q	0.760	1.00
370_L	400_W	0.760	1.00
426_E	429_H	0.760	1.00
422_Y	460_P	0.757	1.00
558_L	571_V	0.755	1.00
409_L	413_G	0.755	1.00
235_G	252_D	0.754	1.00
236_V	239_V	0.750	1.00
195_F	259_P	0.749	1.00
298_A	309_L	0.748	1.00
504_Q	507_S	0.747	1.00
191_K	253_K	0.746	1.00
422_Y	466_A	0.745	1.00
142_S	291_S	0.744	1.00
367_A	409_L	0.743	1.00
289_Q	294_L	0.743	1.00
488_L	491_N	0.741	1.00
408_L	412_S	0.741	1.00
409_L	412_S	0.739	1.00
371_L	402_G	0.739	1.00
330_E	334_C	0.738	1.00
151_I	160_V	0.738	1.00
203_F	273_E	0.737	1.00
200_G	245_Y	0.737	1.00
274_Q	277_G	0.733	1.00
132_D	308_Y	0.730	1.00
361_H	412_S	0.729	1.00
364_F	414_Y	0.727	1.00
335_P	553_K	0.727	1.00
434_E	437_Q	0.726	1.00
422_Y	450_Q	0.721	1.00
456_D	459_R	0.719	1.00
434_E	449_L	0.719	1.00
182_V	195_F	0.719	1.00
368_L	540_I	0.719	1.00
236_V	249_L	0.718	1.00
142_S	316_F	0.716	1.00
185_W	259_P	0.715	1.00
421_L	433_A	0.714	1.00
377_L	435_W	0.714	1.00
358_P	417_E	0.712	1.00
191_K	254_P	0.708	1.00
370_L	399_E	0.707	1.00
137_F	322_E	0.707	1.00
167_L	182_V	0.706	1.00
201_V	245_Y	0.705	1.00
409_L	414_Y	0.704	1.00
134_L	312_V	0.703	1.00
391_S	530_D	0.701	1.00
222_L	252_D	0.700	1.00
195_F	262_L	0.700	1.00
201_V	303_F	0.697	1.00
286_M	294_L	0.696	1.00
372_I	440_C	0.694	1.00
297_E	310_D	0.694	1.00
207_Q	213_D	0.692	1.00
163_I	280_G	0.691	1.00
223_E	226_D	0.691	1.00
427_T	431_E	0.690	1.00
180_H	303_F	0.686	1.00
392_F	541_P	0.683	1.00
347_Q	429_H	0.683	1.00
351_L	359_L	0.683	1.00
159_F	294_L	0.682	1.00
218_F	262_L	0.681	1.00
497_H	500_E	0.681	1.00
424_F	429_H	0.680	1.00
440_C	445_I	0.680	1.00
421_L	470_H	0.680	1.00
361_H	364_F	0.680	1.00
525_I	529_I	0.679	1.00
209_L	217_T	0.679	1.00
197_L	209_L	0.678	1.00
488_L	510_T	0.678	1.00
211_S	215_A	0.678	1.00
353_L	538_N	0.677	1.00
457_L	469_I	0.674	1.00
256_A	522_R	0.672	1.00
203_F	269_I	0.672	1.00
481_F	485_H	0.671	1.00
162_Q	312_V	0.671	1.00
210_T	245_Y	0.670	1.00
353_L	499_S	0.670	1.00
432_D	436_I	0.669	1.00
215_A	240_L	0.668	1.00
511_E	514_F	0.668	1.00
423_T	430_R	0.660	1.00
368_L	468_I	0.659	1.00
137_F	317_S	0.659	1.00
440_C	468_I	0.658	1.00
271_P	279_N	0.658	1.00
552_S	555_V	0.657	1.00
409_L	445_I	0.653	1.00
372_I	540_I	0.653	1.00
285_Q	301_R	0.652	1.00
157_G	265_E	0.650	1.00
151_I	156_E	0.650	1.00
203_F	280_G	0.649	1.00
476_Y	482_G	0.649	1.00
230_K	234_H	0.648	1.00
300_E	310_D	0.647	1.00
436_I	447_L	0.646	1.00
286_M	289_Q	0.645	1.00
551_S	558_L	0.644	1.00
441_A	447_L	0.644	1.00
239_V	249_L	0.641	1.00
164_F	278_K	0.639	1.00
481_F	514_F	0.639	1.00
409_L	443_H	0.639	1.00
340_V	385_R	0.638	1.00
312_V	568_L	0.635	1.00
179_P	184_G	0.633	1.00
375_E	378_V	0.633	1.00
340_V	548_Q	0.632	1.00
349_L	542_L	0.632	1.00
197_L	245_Y	0.632	1.00
144_S	153_L	0.631	1.00
432_D	543_Y	0.631	1.00
371_L	400_W	0.630	1.00
538_N	541_P	0.630	1.00
183_H	186_E	0.628	1.00
284_F	311_R	0.626	1.00
452_C	456_D	0.624	1.00
304_K	307_P	0.624	1.00
203_F	281_T	0.623	1.00
131_K	308_Y	0.623	1.00
489_S	511_E	0.623	1.00
170_F	177_P	0.622	1.00
187_E	259_P	0.622	1.00
167_L	214_V	0.621	1.00
506_C	509_M	0.616	1.00
337_Q	552_S	0.615	1.00
170_F	263_C	0.613	1.00
501_K	532_Q	0.611	1.00
454_A	471_D	0.610	1.00
372_I	542_L	0.609	1.00
480_E	484_L	0.606	1.00
414_Y	445_I	0.605	1.00
473_A	476_Y	0.603	1.00
209_L	245_Y	0.603	1.00
507_S	511_E	0.602	1.00
326_F	552_S	0.601	1.00
136_L	568_L	0.601	1.00
378_V	382_G	0.601	1.00
253_K	511_E	0.601	1.00
359_L	468_I	0.600	1.00
203_F	210_T	0.599	1.00
185_W	196_F	0.597	1.00
425_S	430_R	0.597	1.00
210_T	272_A	0.596	1.00
190_K	517_P	0.595	1.00
424_F	457_L	0.594	1.00
412_S	416_G	0.594	1.00
219_Q	238_Q	0.594	1.00
309_L	555_V	0.592	1.00
406_S	443_H	0.591	1.00
522_R	526_L	0.590	1.00
452_C	457_L	0.589	1.00
427_T	430_R	0.589	1.00
356_K	359_L	0.589	1.00
458_R	462_I	0.589	1.00
412_S	415_E	0.587	1.00
165_D	304_K	0.586	1.00
354_K	360_Q	0.585	1.00
409_L	417_E	0.585	1.00
477_Q	481_F	0.585	1.00
211_S	245_Y	0.583	1.00
233_L	267_L	0.583	1.00
257_L	479_S	0.581	1.00
361_H	413_G	0.580	1.00
203_F	207_Q	0.580	1.00
164_F	274_Q	0.580	1.00
513_M	522_R	0.580	1.00
294_L	316_F	0.580	1.00
385_R	548_Q	0.579	1.00
370_L	401_E	0.578	1.00
440_C	443_H	0.578	1.00
192_Q	240_L	0.578	1.00
315_V	327_T	0.577	1.00
169_T	304_K	0.577	1.00
163_I	278_K	0.575	1.00
434_E	438_N	0.574	1.00
309_L	312_V	0.573	1.00
351_L	369_R	0.571	1.00
128_N	132_D	0.571	1.00
145_S	150_Q	0.570	1.00
527_R	530_D	0.570	1.00
231_W	234_H	0.569	1.00
166_T	281_T	0.567	1.00
145_S	275_G	0.566	1.00
537_L	540_I	0.566	1.00
346_V	389_V	0.566	1.00
216_F	220_R	0.566	1.00
330_E	335_P	0.565	1.00
164_F	281_T	0.565	1.00
286_M	296_L	0.565	1.00
284_F	298_A	0.563	1.00
347_Q	432_D	0.563	1.00
466_A	469_I	0.563	1.00
211_S	243_G	0.562	1.00
347_Q	545_N	0.561	1.00
349_L	421_L	0.560	1.00
519_R	522_R	0.560	1.00
138_I	314_F	0.559	1.00
402_G	409_L	0.559	1.00
219_Q	272_A	0.559	1.00
203_F	209_L	0.559	1.00
410_K	414_Y	0.558	1.00
425_S	451_F	0.558	1.00
359_L	364_F	0.557	1.00
419_I	467_D	0.557	1.00
485_H	489_S	0.555	1.00
503_T	506_C	0.555	1.00
207_Q	272_A	0.554	1.00
473_A	486_L	0.554	1.00
488_L	492_S	0.553	1.00
435_W	438_N	0.553	1.00
146_L	294_L	0.552	1.00
216_F	273_E	0.552	1.00
160_V	164_F	0.551	1.00
343_E	547_L	0.550	1.00
358_P	467_D	0.549	1.00
143_V	294_L	0.548	1.00
159_F	314_F	0.548	1.00
377_L	381_A	0.547	1.00
377_L	436_I	0.546	0.99
516_M	522_R	0.544	0.99
133_V	295_V	0.544	0.99
162_Q	314_F	0.543	0.99
481_F	526_L	0.542	0.99
477_Q	482_G	0.542	0.99
216_F	270_L	0.541	0.99
144_S	156_E	0.541	0.99
381_A	435_W	0.540	0.99
515_S	525_I	0.538	0.99
433_A	470_H	0.537	0.99
131_K	311_R	0.537	0.99
534_I	537_L	0.537	0.99
509_M	513_M	0.537	0.99
187_E	192_Q	0.537	0.99
276_G	291_S	0.536	0.99
375_E	399_E	0.536	0.99
567_D	571_V	0.533	0.99
517_P	521_S	0.532	0.99
275_G	278_K	0.532	0.99
377_L	542_L	0.531	0.99
349_L	470_H	0.530	0.99
219_Q	241_E	0.529	0.99
134_L	571_V	0.529	0.99
353_L	356_K	0.528	0.99
476_Y	483_F	0.528	0.99
128_N	131_K	0.527	0.99
333_T	337_Q	0.526	0.99
551_S	555_V	0.526	0.99
177_P	259_P	0.525	0.99
353_L	360_Q	0.525	0.99
239_V	242_K	0.524	0.99
143_V	146_L	0.524	0.99
505_I	536_E	0.524	0.99
447_L	468_I	0.524	0.99
154_R	474_T	0.524	0.99
289_Q	316_F	0.523	0.99
395_P	544_Q	0.523	0.99
179_P	182_V	0.522	0.99
342_D	387_I	0.521	0.99
348_Y	539_A	0.520	0.99
337_Q	556_K	0.519	0.99
142_S	292_G	0.518	0.99
363_S	407_E	0.517	0.99
204_H	281_T	0.516	0.99
119_F	122_V	0.515	0.99
149_C	217_T	0.515	0.99
222_L	236_V	0.515	0.99
213_D	273_E	0.515	0.99
348_Y	471_D	0.515	0.99
211_S	244_P	0.514	0.99
487_L	539_A	0.514	0.99
154_R	158_H	0.513	0.99
209_L	214_V	0.513	0.99
534_I	541_P	0.512	0.99
197_L	214_V	0.511	0.99
499_S	539_A	0.510	0.99
413_G	416_G	0.510	0.99
153_L	454_A	0.509	0.99
404_S	411_K	0.508	0.99
229_Y	232_L	0.508	0.99
376_R	435_W	0.508	0.99
135_R	328_I	0.508	0.99
484_L	514_F	0.507	0.99
130_A	310_D	0.507	0.99
168_F	263_C	0.505	0.99
215_A	242_K	0.505	0.99
138_I	143_V	0.505	0.99
168_F	262_L	0.505	0.99
535_Q	538_N	0.504	0.99
454_A	457_L	0.504	0.99
146_L	289_Q	0.504	0.99
401_E	407_E	0.503	0.99
549_V	558_L	0.503	0.99
429_H	472_S	0.502	0.99
429_H	470_H	0.502	0.99
278_K	286_M	0.501	0.99
309_L	571_V	0.500	0.99
530_D	534_I	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3zs6A	1	0.7687	100	0.357	Contact Map
4tozA	1	0.7826	100	0.361	Contact Map
1xocA	2	0.7704	100	0.361	Contact Map
1jetA	1	0.7826	100	0.363	Contact Map
3m8uA	1	0.7687	100	0.364	Contact Map
4qflA	1	0.767	100	0.368	Contact Map
1dpeA	1	0.7652	100	0.37	Contact Map
4gl8A	1	0.7635	100	0.371	Contact Map
3tpaA	1	0.767	100	0.371	Contact Map
1uqwA	1	0.7687	100	0.373	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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