GREMLIN Database
O16G1 - Oligo-1,6-glucosidase 1
UniProt: O06994 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 561 (497)
Sequences: 7907 (5268)
Seq/√Len: 236.3

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
37_D90_R4.8781.00
19_Y35_K4.8381.00
129_D157_Q4.7121.00
81_F191_R4.5181.00
30_Q82_Q4.0931.00
88_H194_D4.0611.00
86_E89_K4.0061.00
54_D69_N3.7151.00
103_T125_Y3.4681.00
86_E90_R3.3341.00
356_T466_Y3.3091.00
19_Y34_Q3.1941.00
54_D65_S3.0411.00
87_V94_I3.0001.00
39_I44_A2.9631.00
30_Q33_I2.9541.00
87_V92_M2.8891.00
150_T165_K2.8861.00
178_R239_E2.7901.00
80_M84_I2.5781.00
122_R155_T2.5641.00
373_I453_V2.4701.00
465_F468_Q2.4161.00
76_T79_D2.3881.00
58_D166_K2.3881.00
234_H274_E2.3831.00
68_K183_D2.3741.00
106_E166_K2.3581.00
329_E371_E2.3451.00
108_A112_E2.3211.00
356_T555_A2.3081.00
41_N468_Q2.2911.00
33_I86_E2.2801.00
13_I32_V2.2621.00
77_N191_R2.2391.00
486_Q499_L2.2041.00
499_L506_K2.1521.00
100_V181_V2.1281.00
30_Q79_D2.1261.00
472_Q476_Q2.1091.00
353_A511_V2.0761.00
103_T170_L2.0761.00
82_Q86_E2.0681.00
232_R235_E2.0491.00
152_D155_T2.0471.00
180_E183_D2.0251.00
8_A45_D1.9891.00
36_L90_R1.9761.00
241_N245_L1.9591.00
151_Y156_G1.9581.00
114_R152_D1.9541.00
390_I413_V1.9501.00
357_V511_V1.9391.00
23_G437_A1.9391.00
52_V96_M1.9021.00
458_E465_F1.8861.00
124_Y180_E1.8841.00
245_L248_Y1.8611.00
45_D475_K1.8551.00
58_D164_S1.8551.00
185_M240_M1.8491.00
182_Y239_E1.8421.00
429_A454_K1.8381.00
33_I82_Q1.8331.00
551_K554_E1.8331.00
186_R190_D1.8241.00
384_M443_P1.8151.00
381_P384_M1.8151.00
47_I87_V1.8091.00
186_R247_H1.8051.00
41_N457_L1.8001.00
112_E121_Y1.7811.00
497_S510_V1.7751.00
32_V83_L1.7721.00
36_L87_V1.7531.00
337_I351_A1.7511.00
486_Q501_E1.7491.00
457_L464_F1.7481.00
501_E506_K1.7371.00
26_F73_K1.7241.00
386_D442_I1.7181.00
112_E119_N1.7141.00
484_D501_E1.7121.00
348_K352_K1.7091.00
355_A467_Y1.7061.00
428_D454_K1.7021.00
40_K90_R1.7001.00
173_E232_R1.6961.00
78_E81_F1.6721.00
105_D166_K1.6641.00
186_R243_E1.6601.00
360_G498_Y1.6531.00
85_D89_K1.6481.00
189_M250_C1.6271.00
9_V471_I1.6121.00
494_Q514_S1.6041.00
499_L508_L1.5881.00
108_A111_A1.5821.00
69_N77_N1.5761.00
53_F96_M1.5711.00
121_Y124_Y1.5701.00
376_V447_R1.5611.00
112_E115_K1.5571.00
179_R183_D1.5571.00
10_V46_V1.5541.00
453_V464_F1.5521.00
68_K187_F1.5521.00
52_V70_M1.5371.00
120_P176_A1.5231.00
519_L547_S1.5201.00
41_N464_F1.5161.00
432_H438_G1.5121.00
533_V536_S1.5091.00
68_K184_V1.4981.00
457_L465_F1.4861.00
190_D247_H1.4851.00
179_R243_E1.4851.00
7_E482_Y1.4721.00
54_D66_D1.4631.00
58_D106_E1.4591.00
57_Q71_Y1.4561.00
456_S465_F1.4561.00
464_F468_Q1.4481.00
432_H436_T1.4411.00
243_E247_H1.4351.00
312_T485_Y1.4271.00
180_E184_V1.4191.00
459_D465_F1.4051.00
103_T177_V1.4021.00
519_L549_S1.4021.00
33_I83_L1.3971.00
30_Q34_Q1.3961.00
469_K472_Q1.3941.00
68_K180_E1.3881.00
66_D69_N1.3841.00
122_R152_D1.3831.00
360_G480_M1.3711.00
494_Q518_A1.3691.00
113_S155_T1.3581.00
80_M96_M1.3571.00
238_Q274_E1.3531.00
105_D168_P1.3411.00
238_Q273_Q1.3381.00
52_V80_M1.3361.00
176_A179_R1.3351.00
425_M453_V1.3241.00
309_K313_R1.3181.00
374_G463_I1.3171.00
329_E336_V1.3161.00
232_R236_F1.3111.00
80_M193_V1.3081.00
375_M426_Q1.3041.00
8_A46_V1.2981.00
479_I507_L1.2911.00
511_V555_A1.2891.00
353_A513_L1.2851.00
54_D72_E1.2841.00
175_E179_R1.2771.00
12_Q50_S1.2701.00
116_S119_N1.2571.00
95_V251_M1.2561.00
13_I39_I1.2551.00
39_I47_I1.2521.00
380_M384_M1.2421.00
517_K549_S1.2341.00
323_W364_T1.2321.00
7_E481_I1.2271.00
111_A114_R1.2261.00
328_F354_F1.2261.00
106_E111_A1.2231.00
348_K459_D1.2181.00
266_K272_R1.2151.00
57_Q73_K1.2151.00
32_V49_L1.2131.00
100_V185_M1.2131.00
115_K119_N1.2071.00
263_E266_K1.1921.00
190_D248_Y1.1871.00
356_T470_L1.1811.00
16_R73_K1.1791.00
112_E116_S1.1781.00
81_F85_D1.1741.00
123_D174_N1.1701.00
351_A463_I1.1661.00
477_Y505_E1.1651.00
70_M80_M1.1641.00
352_K466_Y1.1621.00
117_K157_Q1.1501.00
482_Y502_Y1.1481.00
538_Y551_K1.1391.00
15_P32_V1.1361.00
130_P137_P1.1331.00
305_I309_K1.1331.00
468_Q472_Q1.1301.00
342_N515_E1.1261.00
130_P136_E1.1231.00
253_V366_F1.1211.00
312_T487_L1.1211.00
130_P151_Y1.1101.00
163_F203_S1.1071.00
523_P526_L1.1061.00
111_A115_K1.1061.00
179_R182_Y1.1011.00
479_I505_E1.0971.00
20_D25_G1.0871.00
172_W181_V1.0831.00
153_E156_G1.0821.00
382_L385_Y1.0811.00
359_H471_I1.0741.00
113_S127_W1.0721.00
49_L52_V1.0681.00
336_V340_W1.0671.00
243_E248_Y1.0651.00
480_M507_L1.0641.00
189_M248_Y1.0621.00
205_S232_R1.0571.00
385_Y414_M1.0571.00
360_G470_L1.0511.00
305_I493_P1.0511.00
479_I502_Y1.0481.00
514_S518_A1.0461.00
54_D71_Y1.0441.00
540_Q551_K1.0411.00
238_Q272_R1.0411.00
385_Y390_I1.0401.00
241_N246_S1.0391.00
477_Y507_L1.0391.00
178_R236_F1.0391.00
498_Y509_V1.0381.00
346_L349_E1.0381.00
116_S155_T1.0321.00
29_L52_V1.0261.00
100_V198_M1.0241.00
312_T316_T1.0181.00
507_L534_L1.0101.00
201_I204_I1.0071.00
205_S230_G1.0041.00
319_M484_D1.0011.00
521_E547_S1.0001.00
40_K92_M0.9971.00
119_N122_R0.9961.00
98_L185_M0.9951.00
384_M439_D0.9951.00
79_D82_Q0.9911.00
378_S414_M0.9891.00
306_A309_K0.9881.00
533_V537_N0.9851.00
33_I37_D0.9851.00
533_V538_Y0.9841.00
44_A92_M0.9811.00
44_A47_I0.9801.00
35_K38_Y0.9771.00
124_Y176_A0.9701.00
261_I317_G0.9691.00
46_V251_M0.9681.00
21_A30_Q0.9661.00
40_K91_G0.9661.00
136_E147_S0.9631.00
29_L70_M0.9631.00
148_A160_L0.9601.00
115_K121_Y0.9601.00
237_I240_M0.9581.00
181_V184_V0.9541.00
200_V203_S0.9531.00
494_Q516_E0.9511.00
123_D171_N0.9511.00
95_V195_G0.9491.00
198_M275_L0.9481.00
201_I237_I0.9481.00
58_D105_D0.9471.00
319_M362_K0.9471.00
357_V513_L0.9471.00
84_I94_I0.9431.00
457_L468_Q0.9411.00
173_E236_F0.9341.00
131_K137_P0.9331.00
429_A455_E0.9241.00
178_R182_Y0.9221.00
37_D86_E0.9211.00
454_K458_E0.9211.00
29_L80_M0.9201.00
36_L86_E0.9161.00
242_R246_S0.9131.00
121_Y176_A0.9131.00
23_G438_G0.9131.00
77_N187_F0.9121.00
15_P50_S0.9111.00
22_N26_F0.9111.00
117_K129_D0.9101.00
184_V187_F0.9091.00
359_H365_P0.9041.00
10_V366_F0.9041.00
16_R57_Q0.9001.00
117_K122_R0.8981.00
205_S236_F0.8920.99
487_L490_E0.8920.99
452_N455_E0.8920.99
303_D306_A0.8920.99
466_Y555_A0.8890.99
117_K155_T0.8890.99
185_M244_V0.8870.99
282_E313_R0.8860.99
15_P49_L0.8850.99
390_I417_G0.8840.99
147_S150_T0.8830.99
182_Y240_M0.8800.99
243_E246_S0.8790.99
182_Y243_E0.8770.99
303_D493_P0.8710.99
78_E82_Q0.8700.99
266_K269_D0.8670.99
80_M83_L0.8660.99
352_K463_I0.8660.99
236_F240_M0.8650.99
112_E120_P0.8630.99
341_G350_C0.8630.99
83_L94_I0.8630.99
244_V247_H0.8630.99
373_I426_Q0.8630.99
533_V540_Q0.8620.99
57_Q74_F0.8610.99
453_V457_L0.8600.99
251_M277_M0.8590.99
77_N81_F0.8570.99
492_D518_A0.8560.99
122_R157_Q0.8560.99
30_Q76_T0.8550.99
510_V548_I0.8550.99
87_V90_R0.8540.99
71_Y74_F0.8520.99
234_H238_Q0.8490.99
229_N263_E0.8440.99
465_F469_K0.8440.99
115_K154_G0.8410.99
358_L365_P0.8400.99
39_I92_M0.8350.99
21_A24_D0.8340.99
151_Y155_T0.8340.99
82_Q85_D0.8330.99
187_F191_R0.8330.99
349_E538_Y0.8310.99
378_S385_Y0.8310.99
433_A444_V0.8300.99
114_R155_T0.8300.99
12_Q15_P0.8290.99
29_L83_L0.8270.99
113_S122_R0.8230.99
436_T439_D0.8210.99
485_Y496_F0.8210.99
305_I308_K0.8200.99
207_Y226_Y0.8180.99
328_F357_V0.8170.99
373_I456_S0.8160.99
244_V248_Y0.8140.99
56_P65_S0.8120.99
538_Y554_E0.8090.99
238_Q242_R0.8030.99
284_M287_D0.8020.99
488_L508_L0.8010.99
33_I90_R0.7990.99
138_N209_D0.7980.99
96_M193_V0.7910.99
164_S167_Q0.7880.99
46_V93_K0.7880.99
37_D41_N0.7880.99
20_D24_D0.7870.99
38_Y453_V0.7860.99
300_K306_A0.7850.99
202_G256_A0.7850.99
100_V184_V0.7820.99
488_L499_L0.7790.99
367_I467_Y0.7790.99
497_S508_L0.7780.99
426_Q444_V0.7760.99
501_E504_G0.7750.99
15_P29_L0.7750.99
517_K551_K0.7740.99
179_R239_E0.7740.99
307_L311_M0.7740.99
360_G509_V0.7740.99
347_R456_S0.7670.98
269_D273_Q0.7670.98
428_D432_H0.7660.98
376_V451_I0.7660.98
390_I414_M0.7650.98
142_S146_G0.7630.98
202_G257_N0.7620.98
85_D88_H0.7610.98
9_V44_A0.7590.98
4_W8_A0.7590.98
164_S169_D0.7580.98
277_M364_T0.7580.98
456_S459_D0.7550.98
116_S122_R0.7530.98
480_M483_G0.7530.98
115_K152_D0.7520.98
170_L177_V0.7520.98
356_T360_G0.7480.98
203_S228_S0.7480.98
19_Y31_G0.7480.98
311_M361_M0.7480.98
84_I193_V0.7470.98
9_V359_H0.7450.98
308_K312_T0.7440.98
460_Q465_F0.7430.98
536_S539_P0.7400.98
29_L79_D0.7390.98
257_N333_Q0.7380.98
429_A432_H0.7370.98
338_S341_G0.7370.98
173_E205_S0.7370.98
473_L477_Y0.7350.98
355_A463_I0.7320.98
162_Y227_H0.7320.98
328_F336_V0.7310.98
455_E459_D0.7310.98
93_K194_D0.7290.98
21_A83_L0.7280.98
382_L390_I0.7280.98
306_A310_T0.7270.98
114_R154_G0.7230.98
176_A180_E0.7220.98
536_S554_E0.7220.98
495_V520_F0.7210.98
186_R248_Y0.7200.98
254_G275_L0.7200.98
179_R186_R0.7120.97
197_R332_D0.7120.97
359_H470_L0.7120.97
423_T426_Q0.7110.97
119_N155_T0.7090.97
279_F366_F0.7080.97
285_D288_K0.7080.97
536_S540_Q0.7070.97
21_A32_V0.7070.97
447_R451_I0.7070.97
436_T440_P0.7060.97
88_H93_K0.7060.97
127_W152_D0.7050.97
109_W170_L0.6990.97
204_I233_L0.6990.97
299_I302_F0.6990.97
531_W534_L0.6950.97
432_H439_D0.6940.97
230_G233_L0.6930.97
55_S59_D0.6920.97
429_A452_N0.6920.97
38_Y44_A0.6910.97
310_T313_R0.6900.97
49_L80_M0.6890.97
123_D126_L0.6890.97
36_L92_M0.6890.97
537_N540_Q0.6880.97
510_V550_L0.6880.97
426_Q433_A0.6870.97
38_Y464_F0.6840.97
268_T322_G0.6810.97
101_N169_D0.6810.97
429_A449_Q0.6800.97
113_S119_N0.6790.97
47_I83_L0.6790.97
478_K482_Y0.6750.97
489_Q492_D0.6750.97
300_K303_D0.6740.97
315_Q362_K0.6730.96
336_V371_E0.6730.96
114_R117_K0.6720.96
138_N148_A0.6710.96
186_R244_V0.6700.96
279_F284_M0.6700.96
200_V204_I0.6690.96
349_E352_K0.6660.96
413_V417_G0.6650.96
531_W536_S0.6640.96
94_I194_D0.6640.96
532_K540_Q0.6640.96
21_A34_Q0.6640.96
189_M244_V0.6640.96
448_Y452_N0.6630.96
62_Y199_D0.6630.96
550_L554_E0.6610.96
263_E268_T0.6610.96
199_D332_D0.6610.96
385_Y417_G0.6600.96
143_I228_S0.6600.96
77_N80_M0.6600.96
181_V201_I0.6580.96
371_E467_Y0.6580.96
316_T486_Q0.6570.96
131_K136_E0.6570.96
265_K321_V0.6560.96
328_F358_L0.6560.96
343_D347_R0.6550.96
45_D92_M0.6540.96
185_M198_M0.6520.96
46_V95_V0.6520.96
199_D331_H0.6520.96
49_L83_L0.6510.96
286_I310_T0.6500.96
367_I471_I0.6500.96
8_A93_K0.6500.96
304_L308_K0.6500.96
169_D172_W0.6490.96
229_N267_Y0.6490.96
456_S462_S0.6480.96
10_V95_V0.6480.96
532_K536_S0.6470.96
117_K120_P0.6470.96
348_K461_D0.6450.96
533_V539_P0.6450.96
239_E243_E0.6440.95
99_V102_H0.6430.95
22_N28_D0.6420.95
164_S388_L0.6420.95
499_L502_Y0.6410.95
348_K463_I0.6400.95
152_D157_Q0.6390.95
57_Q60_N0.6380.95
207_Y230_G0.6360.95
167_Q171_N0.6350.95
334_P339_R0.6340.95
143_I203_S0.6310.95
163_F167_Q0.6300.95
33_I79_D0.6290.95
244_V252_T0.6290.95
242_R245_L0.6280.95
62_Y332_D0.6280.95
378_S446_S0.6280.95
355_A367_I0.6280.95
347_R350_C0.6270.95
433_A452_N0.6260.95
130_P158_Y0.6230.95
245_L276_N0.6230.95
356_T511_V0.6220.95
33_I87_V0.6190.94
7_E478_K0.6180.94
535_I538_Y0.6180.94
98_L198_M0.6180.94
165_K169_D0.6170.94
62_Y197_R0.6160.94
283_H307_L0.6160.94
162_Y203_S0.6150.94
334_P340_W0.6130.94
118_D121_Y0.6130.94
241_N247_H0.6130.94
235_E240_M0.6120.94
385_Y413_V0.6120.94
282_E285_D0.6110.94
478_K505_E0.6110.94
16_R74_F0.6090.94
177_V180_E0.6080.94
478_K481_I0.6080.94
447_R450_D0.6070.94
261_I268_T0.6070.94
142_S148_A0.6070.94
197_R331_H0.6050.94
36_L47_I0.6050.94
38_Y457_L0.6040.94
369_Q425_M0.6040.94
284_M327_Y0.6020.94
418_R422_R0.6010.94
359_H371_E0.6010.94
130_P133_D0.6010.94
334_P338_S0.5990.93
28_D31_G0.5980.93
127_W130_P0.5980.93
336_V354_F0.5970.93
116_S120_P0.5950.93
433_A448_Y0.5940.93
116_S121_Y0.5940.93
360_G511_V0.5940.93
107_H110_F0.5940.93
177_V184_V0.5940.93
311_M315_Q0.5930.93
350_C353_A0.5930.93
461_D539_P0.5930.93
20_D28_D0.5920.93
173_E208_T0.5910.93
121_Y180_E0.5900.93
269_D272_R0.5880.93
313_R317_G0.5870.93
455_E458_E0.5860.93
428_D448_Y0.5850.93
102_H331_H0.5850.93
69_N78_E0.5850.93
237_I241_N0.5840.93
432_H444_V0.5840.93
13_I50_S0.5810.92
233_L237_I0.5810.92
29_L49_L0.5800.92
461_D465_F0.5790.92
178_R205_S0.5790.92
263_E269_D0.5760.92
304_L307_L0.5760.92
21_A28_D0.5760.92
261_I266_K0.5750.92
534_L537_N0.5740.92
186_R246_S0.5740.92
198_M245_L0.5730.92
183_D190_D0.5730.92
545_L548_I0.5730.92
182_Y186_R0.5710.92
112_E118_D0.5700.92
428_D452_N0.5700.92
113_S152_D0.5700.92
502_Y505_E0.5680.92
510_V520_F0.5680.92
151_Y154_G0.5680.92
456_S464_F0.5670.91
54_D74_F0.5670.91
379_D385_Y0.5670.91
390_I416_K0.5660.91
345_K349_E0.5660.91
84_I194_D0.5660.91
353_A553_Y0.5640.91
531_W540_Q0.5640.91
310_T314_W0.5620.91
65_S106_E0.5620.91
254_G278_I0.5620.91
84_I88_H0.5620.91
168_P171_N0.5620.91
284_M288_K0.5620.91
515_E553_Y0.5610.91
84_I96_M0.5610.91
311_M314_W0.5610.91
56_P59_D0.5600.91
444_V448_Y0.5600.91
316_T319_M0.5590.91
137_P140_W0.5580.91
373_I463_I0.5580.91
431_K436_T0.5570.91
385_Y388_L0.5570.91
109_W180_E0.5550.91
335_R338_S0.5550.91
47_I92_M0.5550.91
10_V364_T0.5550.91
312_T315_Q0.5550.91
138_N208_T0.5540.90
287_D416_K0.5530.90
489_Q495_V0.5530.90
172_W204_I0.5520.90
102_H197_R0.5520.90
521_E545_L0.5520.90
98_L184_V0.5520.90
6_K482_Y0.5510.90
9_V365_P0.5490.90
280_T284_M0.5490.90
260_D263_E0.5480.90
261_I269_D0.5480.90
24_D28_D0.5470.90
202_G258_G0.5470.90
487_L496_F0.5460.90
535_I539_P0.5460.90
484_D502_Y0.5450.90
19_Y437_A0.5450.90
120_P124_Y0.5450.90
251_M276_N0.5440.90
532_K535_I0.5440.90
265_K268_T0.5440.90
356_T509_V0.5440.90
281_F284_M0.5440.90
485_Y498_Y0.5420.90
450_D455_E0.5420.90
477_Y480_M0.5420.90
365_P470_L0.5410.89
484_D499_L0.5410.89
301_P304_L0.5410.89
199_D255_E0.5380.89
226_Y230_G0.5380.89
100_V240_M0.5370.89
27_G31_G0.5360.89
167_Q172_W0.5350.89
29_L32_V0.5350.89
541_E544_D0.5350.89
235_E238_Q0.5340.89
492_D495_V0.5340.89
202_G259_S0.5340.89
334_P337_I0.5330.89
526_L531_W0.5330.89
113_S121_Y0.5320.89
10_V251_M0.5310.89
15_P74_F0.5310.89
151_Y157_Q0.5310.89
88_H94_I0.5310.89
97_D197_R0.5300.88
302_F305_I0.5300.88
350_C553_Y0.5300.88
70_M77_N0.5290.88
380_M385_Y0.5290.88
443_P446_S0.5290.88
16_R71_Y0.5290.88
496_F511_V0.5280.88
46_V92_M0.5280.88
177_V181_V0.5280.88
49_L87_V0.5270.88
202_G228_S0.5260.88
102_H199_D0.5260.88
41_N465_F0.5250.88
424_P427_W0.5240.88
41_N472_Q0.5240.88
380_M383_E0.5240.88
531_W535_I0.5230.88
495_V550_L0.5230.88
338_S377_N0.5230.88
532_K537_N0.5230.88
473_L534_L0.5230.88
164_S168_P0.5220.88
240_M244_V0.5210.88
229_N258_G0.5210.88
311_M496_F0.5170.87
22_N30_Q0.5170.87
26_F57_Q0.5160.87
233_L236_F0.5160.87
307_L328_F0.5150.87
333_Q421_A0.5140.87
359_H367_I0.5140.87
461_D469_K0.5130.87
70_M96_M0.5110.87
273_Q276_N0.5110.87
78_E191_R0.5110.87
351_A355_A0.5110.87
183_D186_R0.5100.87
240_M243_E0.5100.87
98_L181_V0.5090.86
241_N276_N0.5080.86
335_R339_R0.5080.86
39_I471_I0.5080.86
495_V518_A0.5070.86
520_F548_I0.5070.86
384_M390_I0.5070.86
325_T366_F0.5060.86
278_I282_E0.5060.86
64_I99_V0.5060.86
275_L281_F0.5060.86
309_K312_T0.5050.86
342_N350_C0.5050.86
280_T327_Y0.5050.86
142_S145_S0.5040.86
18_F39_I0.5040.86
241_N244_V0.5040.86
62_Y331_H0.5040.86
336_V467_Y0.5030.86
38_Y41_N0.5020.86
257_N285_D0.5000.85
302_F306_A0.5000.85
209_D226_Y0.5000.85
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4mb1A 1 0.9929 100 0.152 Contact Map
2ze0A 2 0.9394 100 0.169 Contact Map
1uokA 1 0.9911 100 0.17 Contact Map
3aj7A 1 0.9911 100 0.185 Contact Map
4hphA 1 0.9822 100 0.186 Contact Map
3wy2A 1 0.9269 100 0.188 Contact Map
4aieA 1 0.9537 100 0.19 Contact Map
2zicA 1 0.9465 100 0.197 Contact Map
1zjaA 1 0.9804 100 0.2 Contact Map
3zo9A 4 0.8895 100 0.22 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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