GREMLIN Database
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E. coli
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Complexes (2014)
PFAM (2013)
YFMO
- Multidrug efflux protein YfmO
UniProt:
O06473
Sequences:
MDKTTQVNQKTGLLSQPKAVWAVAFACVISFMGIGLVDPILPAIAAQLHASPSEVSLLFTSYLLVTGFMMFFSGAISSRIGAKWTLILGLIFIIVFAGLGGSSSSIAQLVGYRGGWGLGNALFISTALAVIVGVSVGGSAQAIILYEAALGLGISVGPLAGGELGSISWRAPFFGVSVLMFIALIAISFMLPKLPKPAKRVGVFDAMKALKYKGLLTMAVSAFLYNFGFFILLAYSPFVLDLDEHGLGYVFFGWGLLLAITSVFTAPLVHKALGTVRSLVVLFIAFAAILVIMGIWTDHQTLIITCIVVAGAVLGMVNTIMTTAVMGSAPVERSIASSAYSSVRFIGGALAPWIAGMLSEHFTASTPYTVGGIVVFVGMLVLLMGRKHLAGIKAGH
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.
Date: 2015_01
Length:
396 (363)
Sequences:
162395 (117540)
Seq/√Len:
6169.2
ECOLI
-
MDFA
NEPI
YDJE
MDTM
YEBQ
MHPT
UHPT
YAAU
NANT
RHMT
YJJL
SOTB
YGCS
KGTP
UHPC
TSGA
HSRA
YBJJ
NARU
YJIJ
YDHP
NARK
MDTG
YDJK
PROP
ARAE
YHHS
GALP
YDIN
MDTH
MDTL
YHJE
YJHB
YDIM
SHIA
GLPT
ENTS
FUCP
YDEE
GUDP
ARAJ
EMRD
YHJX
YNFM
SETB
BCR
MDTD
YDHC
FSR
XYLE
CYNX
YGAY
YAJR
EXUT
SETC
DGOT
SETA
LACY
YQCE
YIHN
YIHP
EMRY
YCAD
XAPB
GARP
EMRB
NUPG
YIHO
AMPG
UIDB
YFCJ
YICJ
YDFJ
YEGT
YEAN
LPLT
YAGG
MELB
HCAT
DTPA
BACSU
-
YFMO
YWFA
MMR
YCNB
YFHI
YFNC
YTBD
YYBO
YVMA
YHJO
YYCB
NASA
YBCL
BMR1
YCEJ
YWOD
ARAE
PBUE
YBFB
GUDP
CSBX
GLPT
YYBF
YFKL
YYAJ
YFIG
YCXA
TCRB
YWOG
BMR2
YJBB
YITG
YJMB
YDGK
YUBD
EXUT
YFKF
YNCC
NAIP
YDDS
CSBC
YQJV
NARK
GUTA
LMRB
YTTB
YWBF
YQGE
GLCP
YXAM
IOLF
YHCA
YWTG
YVKA
IOLT
YXLH
YFIS
YVQJ
YUXJ
YDEG
YOAB
BBEX
YFMI
YDER
YNAJ
YKUC
BMR3
YUSP
YFIU
YXIO
YCLF
HALSA
-
Q9HRX5
Q9HSM8
O54630
Q9HMR5
Q9HSK3
Q9HPD6
Q9HS33
Q9HN67
Q9HMQ8
Q9HSE5
SULSO
-
Q97WR1
Q97U43
Q7LX71
Q97U80
Q97YL8
Q97YY8
Q7LX65
Q97VV2
Q97X47
Q97U99
Q97VU3
Q97X63
Q97WR9
Q97Y43
Q97YH0
Q97UD8
Q97VT2
Q97WS7
Q97UR4
Q97UY7
Q97VB9
Q97U98
Q97U76
Q97U91
Q97ZC9
Q97WT1
Q97Y11
Q97VC8
Q97VB7
Q97V89
Q97Z36
Q97XW7
Q97VQ5
Q980K3
Q97X92
Q97YG2
Q97Z05
Q97X02
Q97Y15
Q97VD1
Q97Z07
Q97WP8
Q97UJ4
Q97UK1
Q97WJ7
Q97U71
Q97YI4
Q97YW8
Q97XG8
Q97UY6
No predictions exist for 'O06473'
There is enough sequences (162395 > 100) to run GREMLIN, this page will be updated soon.
Sequence Conservation
(Image Generated using
WebLogo v3
)
Legend:
Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.
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