GREMLIN Database
YDIF - Uncharacterized ABC transporter ATP-binding protein YdiF
UniProt: O05519 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 642 (520)
Sequences: 5292 (3622)
Seq/√Len: 158.8

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
593_N619_D5.0541.00
579_R633_E4.2321.00
223_D245_S4.0941.00
331_D345_E3.9281.00
273_Q277_D3.4991.00
329_V332_L3.4241.00
405_S443_H3.3141.00
406_K414_D3.1741.00
586_T626_E3.1441.00
505_N527_D2.9741.00
624_N628_E2.8861.00
612_K615_A2.7751.00
334_I380_D2.7391.00
330_Q383_T2.7241.00
228_Q239_K2.7111.00
276_V293_R2.6841.00
609_D612_K2.6231.00
622_K626_E2.5771.00
403_T406_K2.5411.00
594_I623_L2.4881.00
238_K254_Q2.4851.00
334_I372_T2.4531.00
332_L379_P2.4411.00
158_T162_S2.4041.00
341_P344_T2.3851.00
335_S380_D2.3651.00
586_T630_L2.3521.00
587_V627_L2.3401.00
593_N596_R2.3131.00
280_L293_R2.3091.00
246_A250_Q2.2521.00
598_D620_N2.2451.00
618_A622_K2.2381.00
583_I630_L2.2191.00
596_R600_L2.2121.00
590_I630_L2.1731.00
226_V229_V2.1711.00
597_N616_I2.1701.00
582_E586_T2.1551.00
600_L612_K2.1391.00
594_I620_N2.1291.00
262_Y266_Q2.1121.00
615_A619_D2.1061.00
134_G137_Q2.1061.00
619_D622_K2.0391.00
600_L603_D2.0381.00
293_R297_E2.0161.00
370_L497_V1.9991.00
206_Q224_K1.9891.00
141_D180_Q1.9561.00
129_E133_K1.9361.00
249_D253_A1.9351.00
354_E510_R1.9291.00
598_D624_N1.9211.00
240_Y254_Q1.9141.00
333_T381_Q1.9031.00
577_L581_E1.8831.00
246_A249_D1.8661.00
130_F135_G1.8581.00
357_A504_I1.8551.00
350_L356_A1.8541.00
372_T379_P1.8211.00
250_Q253_A1.8051.00
597_N623_L1.8021.00
631_L635_E1.7801.00
590_I623_L1.7801.00
331_D347_S1.7511.00
578_R581_E1.7491.00
589_T593_N1.7481.00
155_D158_T1.7411.00
419_L423_E1.7371.00
290_Q293_R1.7321.00
291_S294_K1.7311.00
593_N623_L1.7001.00
442_V453_L1.6961.00
202_E224_K1.6931.00
588_Q592_E1.6911.00
628_E632_S1.6811.00
592_E596_R1.6771.00
257_K261_M1.6771.00
594_I624_N1.6761.00
268_E271_K1.6751.00
372_T384_I1.6601.00
586_T589_T1.6561.00
614_Q618_A1.6521.00
282_R285_T1.6431.00
290_Q294_K1.6311.00
252_A256_E1.6291.00
159_Q162_S1.6161.00
335_S341_P1.6141.00
620_N624_N1.5931.00
578_R582_E1.5931.00
611_E615_A1.5911.00
253_A257_K1.5901.00
185_I215_V1.5861.00
374_I467_I1.5851.00
356_A512_L1.5721.00
231_E247_Y1.5621.00
580_I637_L1.5521.00
510_R521_E1.5431.00
626_E630_L1.5301.00
329_V348_F1.5131.00
284_S287_K1.4971.00
253_A256_E1.4861.00
626_E629_S1.4801.00
267_D270_A1.4751.00
337_E341_P1.4751.00
343_L346_V1.4711.00
294_K297_E1.4701.00
371_K376_T1.4701.00
585_T588_Q1.4531.00
274_D277_D1.4431.00
372_T380_D1.4421.00
587_V591_E1.4401.00
632_S635_E1.4371.00
357_A508_A1.4321.00
619_D623_L1.4191.00
160_V171_L1.4101.00
574_R578_R1.4061.00
272_L295_Q1.4061.00
588_Q591_E1.4041.00
623_L626_E1.3981.00
595_S598_D1.3841.00
408_V442_V1.3791.00
302_M305_P1.3791.00
600_L616_I1.3791.00
629_S632_S1.3761.00
329_V373_L1.3761.00
122_T125_R1.3701.00
338_N341_P1.3681.00
617_H621_E1.3631.00
273_Q301_V1.3591.00
288_R296_L1.3591.00
598_D602_C1.3581.00
530_T533_K1.3551.00
269_I301_V1.3491.00
230_Y237_S1.3471.00
586_T590_I1.3411.00
408_V453_L1.3361.00
593_N600_L1.3291.00
487_L494_L1.3231.00
529_Y533_K1.3161.00
595_S599_E1.3111.00
629_S633_E1.3071.00
243_N246_A1.2951.00
591_E627_L1.2941.00
404_S443_H1.2921.00
573_E577_L1.2911.00
276_V296_L1.2911.00
344_T518_H1.2901.00
567_K570_K1.2841.00
621_E625_Q1.2831.00
590_I627_L1.2811.00
332_L372_T1.2791.00
496_F508_A1.2731.00
615_A618_A1.2661.00
583_I637_L1.2621.00
594_I627_L1.2591.00
163_L171_L1.2491.00
594_I598_D1.2491.00
625_Q628_E1.2471.00
250_Q254_Q1.2461.00
290_Q296_L1.2361.00
440_K444_S1.2331.00
125_R129_E1.2301.00
128_Q131_K1.2281.00
231_E251_K1.2281.00
525_D528_Y1.2281.00
515_S520_E1.2251.00
632_S636_E1.2241.00
117_E121_K1.2231.00
410_D413_W1.2171.00
618_A621_E1.2141.00
325_E385_S1.2141.00
242_G250_Q1.2121.00
128_Q132_D1.2091.00
348_F512_L1.2011.00
152_S155_D1.1981.00
576_R637_L1.1981.00
568_E571_K1.1951.00
139_E143_R1.1901.00
329_V384_I1.1871.00
407_R410_D1.1861.00
625_Q629_S1.1851.00
290_Q298_R1.1851.00
262_Y265_Q1.1811.00
562_S565_E1.1771.00
230_Y239_K1.1761.00
633_E636_E1.1731.00
294_K298_R1.1721.00
289_A294_K1.1721.00
581_E585_T1.1701.00
411_E457_K1.1601.00
560_K563_Y1.1581.00
292_R296_L1.1571.00
279_N282_R1.1561.00
242_G246_A1.1551.00
291_S296_L1.1551.00
580_I638_S1.1541.00
361_P364_I1.1521.00
288_R291_S1.1521.00
411_E442_V1.1501.00
420_P423_E1.1501.00
291_S298_R1.1491.00
196_D361_P1.1451.00
330_Q347_S1.1431.00
356_A495_L1.1401.00
575_Q578_R1.1341.00
628_E635_E1.1331.00
590_I594_I1.1311.00
292_R299_M1.1291.00
406_K411_E1.1281.00
612_K616_I1.1261.00
328_R385_S1.1241.00
266_Q269_I1.1221.00
185_I213_L1.1211.00
575_Q579_R1.1191.00
121_K125_R1.1161.00
633_E637_L1.1161.00
597_N620_N1.1131.00
287_K290_Q1.1121.00
623_L627_L1.1111.00
289_A293_R1.1101.00
334_I377_L1.1071.00
284_S288_R1.1011.00
168_K398_E1.0991.00
605_E608_Q1.0971.00
259_L263_E1.0960.99
405_S441_P1.0960.99
275_F288_R1.0950.99
579_R583_I1.0910.99
393_G463_A1.0910.99
296_L299_M1.0890.99
183_L211_A1.0880.99
622_K625_Q1.0870.99
419_L422_K1.0860.99
268_E299_M1.0850.99
332_L384_I1.0850.99
280_L286_T1.0840.99
568_E572_K1.0840.99
214_I226_V1.0800.99
563_Y567_K1.0720.99
628_E631_L1.0710.99
463_A490_Y1.0690.99
343_L372_T1.0680.99
406_K410_D1.0650.99
603_D606_V1.0640.99
285_T288_R1.0590.99
561_R564_E1.0580.99
391_S461_Q1.0580.99
596_R599_E1.0550.99
287_K292_R1.0520.99
496_F507_I1.0520.99
437_D440_K1.0510.99
582_E585_T1.0500.99
336_Y377_L1.0450.99
322_S390_V1.0420.99
287_K291_S1.0410.99
601_L606_V1.0400.99
288_R294_K1.0390.99
621_E624_N1.0390.99
220_Y502_Y1.0350.99
180_Q209_S1.0330.99
265_Q302_M1.0320.99
292_R298_R1.0300.99
371_K377_L1.0260.99
528_Y532_K1.0240.99
522_Y532_K1.0230.99
564_E567_K1.0220.99
558_D561_R1.0220.99
269_I296_L1.0220.99
289_A292_R1.0210.99
467_I495_L1.0210.99
288_R292_R1.0190.99
256_E260_K1.0130.99
496_F503_F1.0120.99
386_Y390_V1.0090.99
291_S299_M1.0040.99
563_Y566_E1.0020.99
587_V631_L1.0010.99
289_A296_L1.0000.99
583_I633_E0.9920.99
279_N285_T0.9920.99
289_A298_R0.9860.99
203_H206_Q0.9850.99
565_E569_W0.9840.99
232_V237_S0.9830.99
288_R293_R0.9820.99
367_S371_K0.9800.99
137_Q141_D0.9780.99
286_T290_Q0.9780.99
573_E576_R0.9770.99
537_L540_E0.9760.99
285_T293_R0.9750.99
124_D128_Q0.9740.99
562_S566_E0.9740.99
597_N619_D0.9740.99
255_Y259_L0.9730.99
129_E132_D0.9720.99
293_R296_L0.9710.99
283_A286_T0.9680.99
487_L507_I0.9680.99
604_P607_Y0.9670.99
289_A300_D0.9640.99
422_K426_T0.9630.99
286_T289_A0.9620.99
287_K293_R0.9550.99
205_L212_I0.9540.99
496_F504_I0.9500.99
600_L619_D0.9490.99
574_R577_L0.9450.99
524_G529_Y0.9450.99
616_I619_D0.9400.98
565_E568_E0.9390.98
290_Q300_D0.9370.98
298_R302_M0.9370.98
240_Y247_Y0.9370.98
513_E529_Y0.9360.98
288_R295_Q0.9360.98
465_F495_L0.9360.98
564_E568_E0.9350.98
268_E272_L0.9350.98
468_L494_L0.9320.98
566_E570_K0.9300.98
561_R565_E0.9270.98
299_M302_M0.9260.98
601_L617_H0.9240.98
203_H207_G0.9210.98
583_I587_V0.9210.98
538_E542_M0.9200.98
233_S238_K0.9190.98
585_T589_T0.9170.98
611_E614_Q0.9160.98
277_D280_L0.9150.98
576_R580_I0.9140.98
346_V512_L0.9110.98
281_A286_T0.9100.98
122_T126_L0.9080.98
274_D278_R0.9060.98
409_L413_W0.9050.98
592_E595_S0.9050.98
324_N351_T0.9050.98
601_L613_V0.9040.98
513_E533_K0.9030.98
613_V617_H0.8990.98
291_S300_D0.8980.98
379_P384_I0.8950.98
538_E541_K0.8950.98
333_T344_T0.8940.98
617_H620_N0.8940.98
291_S295_Q0.8930.98
257_K260_K0.8920.98
336_Y342_L0.8910.98
556_K560_K0.8910.98
504_I508_A0.8900.98
477_L481_E0.8900.98
256_E259_L0.8890.98
527_D531_E0.8880.98
571_K574_R0.8870.98
533_K536_Q0.8860.98
614_Q617_H0.8780.98
271_K274_D0.8760.98
559_S563_Y0.8760.98
541_K544_Q0.8700.97
584_E638_S0.8670.97
590_I593_N0.8670.97
320_K391_S0.8670.97
610_H614_Q0.8660.97
297_E301_V0.8650.97
258_D302_M0.8630.97
606_V613_V0.8610.97
599_E603_D0.8610.97
570_K574_R0.8610.97
526_Y529_Y0.8560.97
143_R153_H0.8560.97
576_R579_R0.8560.97
298_R301_V0.8550.97
428_L431_F0.8510.97
528_Y531_E0.8480.97
223_D243_N0.8480.97
559_S562_S0.8450.97
119_I122_T0.8450.97
283_A290_Q0.8440.97
537_L541_K0.8420.97
318_I491_P0.8410.97
284_S293_R0.8390.97
118_S122_T0.8370.97
409_L424_I0.8350.97
160_V172_A0.8340.97
327_L386_Y0.8340.97
593_N597_N0.8310.97
375_D386_Y0.8310.97
330_Q385_S0.8310.97
531_E534_T0.8230.96
328_R349_M0.8220.96
265_Q299_M0.8220.96
543_N546_E0.8170.96
284_S289_A0.8160.96
590_I626_E0.8150.96
627_L630_L0.8150.96
270_A274_D0.8130.96
334_I368_T0.8130.96
181_P208_Y0.8130.96
488_I506_R0.8110.96
519_I522_Y0.8090.96
216_S222_L0.8020.96
278_R281_A0.8010.96
322_S465_F0.8010.96
436_D439_L0.7990.96
560_K564_E0.7990.96
569_W572_K0.7990.96
149_L174_G0.7950.96
285_T289_A0.7940.96
539_L542_M0.7930.96
512_L521_E0.7910.96
529_Y532_K0.7910.96
289_A299_M0.7910.96
335_S338_N0.7900.95
240_Y250_Q0.7900.95
327_L350_L0.7900.95
571_K578_R0.7880.95
542_M545_Q0.7850.95
555_V558_D0.7830.95
300_D304_K0.7800.95
335_S372_T0.7800.95
326_V493_T0.7760.95
536_Q539_L0.7760.95
441_P444_S0.7720.95
372_T378_K0.7710.95
275_F292_R0.7710.95
467_I497_V0.7700.95
127_Q131_K0.7700.95
117_E120_M0.7690.95
515_S518_H0.7680.95
526_Y530_T0.7680.95
413_W424_I0.7670.95
530_T534_T0.7620.95
229_V243_N0.7620.95
373_L495_L0.7610.94
524_G528_Y0.7610.94
572_K576_R0.7600.94
263_E267_D0.7570.94
208_Y212_I0.7560.94
222_L247_Y0.7560.94
426_T430_N0.7540.94
545_Q548_T0.7510.94
335_S342_L0.7500.94
158_T163_L0.7490.94
606_V616_I0.7480.94
323_G326_V0.7480.94
579_R582_E0.7440.94
183_L213_L0.7430.94
126_L129_E0.7420.94
294_K300_D0.7420.94
279_N286_T0.7410.94
393_G458_L0.7410.94
403_T411_E0.7390.94
429_G434_S0.7380.94
260_K263_E0.7360.93
607_Y613_V0.7360.93
152_S156_D0.7350.93
323_G387_G0.7350.93
410_D414_D0.7340.93
425_R438_V0.7330.93
370_L467_I0.7310.93
579_R586_T0.7270.93
275_F282_R0.7270.93
134_G141_D0.7240.93
283_A288_R0.7210.93
610_H613_V0.7190.93
427_C456_A0.7190.93
518_H521_E0.7190.93
564_E570_K0.7170.93
333_T341_P0.7160.93
554_T558_D0.7160.93
591_E631_L0.7140.92
485_N489_D0.7140.92
344_T516_S0.7140.92
575_Q581_E0.7140.92
599_E602_C0.7110.92
275_F279_N0.7080.92
281_A293_R0.7080.92
589_T592_E0.7070.92
260_K264_K0.7060.92
275_F284_S0.7050.92
285_T290_Q0.7050.92
334_I337_E0.7020.92
138_Y178_L0.7010.92
566_E569_W0.7010.92
374_I392_V0.7000.92
423_E426_T0.7000.92
279_N293_R0.6980.92
591_E595_S0.6960.91
543_N547_E0.6960.91
123_Y127_Q0.6950.91
418_G423_E0.6950.91
277_D282_R0.6950.91
619_D626_E0.6930.91
621_E628_E0.6930.91
176_L184_L0.6920.91
350_L512_L0.6920.91
415_E457_K0.6910.91
627_L631_L0.6910.91
286_T293_R0.6900.91
531_E535_E0.6890.91
283_A287_K0.6890.91
557_S560_K0.6880.91
514_L519_I0.6880.91
264_K268_E0.6870.91
419_L424_I0.6870.91
317_D462_K0.6870.91
369_L373_L0.6840.91
289_A295_Q0.6830.91
140_A144_S0.6810.91
557_S563_Y0.6810.91
288_R300_D0.6810.91
364_I514_L0.6780.90
223_D502_Y0.6730.90
293_R299_M0.6720.90
322_S326_V0.6710.90
259_L262_Y0.6710.90
335_S339_Q0.6700.90
254_Q257_K0.6680.90
286_T292_R0.6670.90
584_E588_Q0.6670.90
212_I225_V0.6640.89
354_E509_T0.6630.89
280_L289_A0.6630.89
313_N316_F0.6630.89
532_K536_Q0.6610.89
409_L438_V0.6610.89
296_L300_D0.6580.89
131_K135_G0.6570.89
205_L225_V0.6570.89
288_R298_R0.6560.89
275_F281_A0.6560.89
277_D281_A0.6550.89
408_V414_D0.6530.89
556_K563_Y0.6530.89
634_W638_S0.6520.89
536_Q540_E0.6510.88
558_D562_S0.6490.88
153_H157_S0.6490.88
373_L384_I0.6480.88
554_T559_S0.6480.88
288_R302_M0.6470.88
282_R286_T0.6470.88
138_Y142_V0.6470.88
395_Y451_A0.6470.88
597_N600_L0.6460.88
419_L460_L0.6460.88
386_Y392_V0.6420.88
392_V465_F0.6410.88
532_K535_E0.6400.88
291_S297_E0.6390.88
283_A291_S0.6390.88
279_N288_R0.6380.87
151_F163_L0.6380.87
123_Y130_F0.6380.87
534_T537_L0.6370.87
402_L411_E0.6360.87
268_E295_Q0.6350.87
344_T381_Q0.6350.87
231_E254_Q0.6350.87
206_Q225_V0.6350.87
295_Q298_R0.6350.87
269_I273_Q0.6340.87
153_H156_D0.6340.87
290_Q297_E0.6340.87
151_F171_L0.6320.87
265_Q269_I0.6320.87
359_V511_V0.6300.87
137_Q140_A0.6290.87
275_F283_A0.6290.87
350_L493_T0.6280.87
131_K136_Y0.6280.87
552_P557_S0.6280.87
614_Q621_E0.6270.87
308_D311_S0.6260.86
293_R298_R0.6250.86
303_S306_L0.6250.86
338_N342_L0.6240.86
289_A302_M0.6240.86
333_T345_E0.6230.86
192_H456_A0.6230.86
121_K124_D0.6230.86
412_L456_A0.6220.86
560_K565_E0.6220.86
529_Y536_Q0.6210.86
284_S290_Q0.6190.86
287_K299_M0.6180.86
571_K581_E0.6170.86
291_S302_M0.6170.86
547_E551_T0.6170.86
409_L439_L0.6160.86
429_G435_G0.6140.85
427_C430_N0.6130.85
296_L302_M0.6130.85
604_P608_Q0.6110.85
334_I343_L0.6110.85
554_T557_S0.6100.85
333_T343_L0.6100.85
290_Q299_M0.6090.85
587_V630_L0.6050.85
130_F136_Y0.6050.85
572_K575_Q0.6040.84
545_Q549_D0.6030.84
287_K298_R0.6030.84
593_N626_E0.6020.84
177_L200_W0.6020.84
579_R637_L0.6010.84
269_I276_V0.6010.84
282_R291_S0.5990.84
570_K573_E0.5980.84
331_D381_Q0.5980.84
560_K566_E0.5970.84
609_D615_A0.5970.84
144_S148_G0.5950.84
195_I199_T0.5940.84
287_K296_L0.5940.84
573_E578_R0.5930.83
130_F134_G0.5930.83
350_L495_L0.5930.83
546_E550_K0.5920.83
555_V560_K0.5900.83
160_V168_K0.5900.83
202_E501_R0.5890.83
353_G493_T0.5890.83
542_M546_E0.5880.83
297_E300_D0.5880.83
289_A297_E0.5880.83
541_K545_Q0.5880.83
123_Y131_K0.5870.83
279_N290_Q0.5870.83
287_K294_K0.5850.83
126_L130_F0.5840.82
325_E328_R0.5840.82
557_S564_E0.5840.82
282_R288_R0.5840.82
143_R147_H0.5830.82
404_S453_L0.5810.82
288_R297_E0.5810.82
543_N595_S0.5810.82
272_L275_F0.5810.82
609_D613_V0.5800.82
540_E543_N0.5790.82
297_E304_K0.5790.82
580_I583_I0.5780.82
561_R567_K0.5780.82
594_I597_N0.5770.82
498_S504_I0.5770.82
346_V519_I0.5760.82
552_P558_D0.5760.82
296_L303_S0.5740.81
367_S401_E0.5730.81
244_Y248_L0.5730.81
285_T295_Q0.5730.81
333_T380_D0.5720.81
549_D553_A0.5720.81
220_Y505_N0.5720.81
547_E555_V0.5700.81
518_H522_Y0.5700.81
427_C460_L0.5700.81
238_K247_Y0.5700.81
290_Q304_K0.5670.81
215_V465_F0.5660.80
593_N622_K0.5660.80
228_Q241_H0.5660.80
515_S533_K0.5650.80
556_K564_E0.5650.80
490_Y494_L0.5640.80
555_V559_S0.5640.80
373_L386_Y0.5630.80
544_Q547_E0.5620.80
331_D334_I0.5610.80
610_H617_H0.5600.80
278_R286_T0.5600.80
265_Q276_V0.5590.80
604_P609_D0.5590.80
294_K302_M0.5580.80
378_K386_Y0.5560.79
192_H473_N0.5560.79
567_K575_Q0.5560.79
241_H246_A0.5560.79
269_I300_D0.5550.79
502_Y506_R0.5540.79
264_K267_D0.5540.79
548_T553_A0.5540.79
572_K579_R0.5530.79
344_T517_S0.5530.79
145_V204_Y0.5530.79
275_F285_T0.5520.79
320_K389_N0.5520.79
571_K575_Q0.5500.79
512_L519_I0.5500.79
273_Q276_V0.5490.78
526_Y533_K0.5490.78
387_G464_N0.5480.78
167_Q395_Y0.5470.78
258_D261_M0.5470.78
282_R293_R0.5460.78
606_V612_K0.5460.78
407_R441_P0.5450.78
276_V280_L0.5450.78
323_G503_F0.5450.78
323_G388_S0.5440.78
548_T556_K0.5440.78
155_D163_L0.5440.78
551_T592_E0.5440.78
563_Y570_K0.5430.78
285_T291_S0.5430.78
149_L200_W0.5430.78
293_R300_D0.5420.78
292_R295_Q0.5420.78
533_K537_L0.5420.78
415_E461_Q0.5400.77
498_S503_F0.5400.77
378_K595_S0.5390.77
145_V178_L0.5380.77
591_E635_E0.5380.77
231_E240_Y0.5370.77
243_N250_Q0.5370.77
569_W573_E0.5370.77
355_S509_T0.5370.77
287_K295_Q0.5370.77
355_S494_L0.5360.77
556_K559_S0.5360.77
276_V297_E0.5350.77
630_L633_E0.5350.77
336_Y341_P0.5340.77
327_L465_F0.5320.76
154_F158_T0.5320.76
282_R290_Q0.5320.76
557_S562_S0.5300.76
376_T396_D0.5300.76
515_S522_Y0.5290.76
484_E506_R0.5290.76
627_L634_W0.5280.76
517_S521_E0.5280.76
125_R128_Q0.5280.76
454_A457_K0.5270.76
541_K552_P0.5270.76
260_K453_L0.5260.75
248_L481_E0.5260.75
612_K619_D0.5260.75
173_L197_T0.5250.75
147_H156_D0.5240.75
574_R581_E0.5230.75
625_Q632_S0.5230.75
323_G389_N0.5230.75
288_R303_S0.5200.75
173_L193_L0.5200.75
142_V145_V0.5170.74
275_F280_L0.5170.74
294_K299_M0.5160.74
214_I225_V0.5150.74
351_T354_E0.5150.74
284_S292_R0.5150.74
435_G438_V0.5140.74
265_Q301_V0.5140.74
556_K562_S0.5110.73
162_S167_Q0.5110.73
245_S249_D0.5100.73
618_A625_Q0.5090.73
143_R156_D0.5090.73
281_A285_T0.5090.73
120_M123_Y0.5080.73
284_S291_S0.5070.73
412_L424_I0.5070.73
396_D400_A0.5060.73
570_K577_L0.5050.73
555_V563_Y0.5040.72
354_E493_T0.5040.72
550_K558_D0.5030.72
274_D280_L0.5030.72
535_E541_K0.5020.72
339_Q516_S0.5020.72
338_N380_D0.5010.72
609_D618_A0.5000.72
589_T629_S0.5000.72
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4finA 2 0.8302 100 0.441 Contact Map
2iw3A 2 0.6713 100 0.502 Contact Map
3bk7A 1 0.7819 100 0.552 Contact Map
1yqtA 1 0.7757 100 0.56 Contact Map
3ozxA 1 0.7773 100 0.569 Contact Map
4q9hA 1 0.7679 100 0.57 Contact Map
3j16B 1 0.796 100 0.575 Contact Map
4f4cA 1 0.7212 100 0.577 Contact Map
3ux8A 2 0.6651 100 0.612 Contact Map
2vf7A 2 0.7227 100 0.673 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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