PTEC - BACSU - GREMLIN Contacts

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PTEC - Oligo-beta-mannoside permease IIC component

UniProt:	O05507	Sequences: MFEKISQFLVPIAGRLNNNRYLQVLRDAFMLAFPLTIFGSIFVVLTNLPFLNKIMNASMLTSFQSHFGIASTATMGIMSVFVVFGIGYYLSKSYQVEAVFGGAIALVSFLLLTPFIIQPETGDAITGVIPVDRLGAKGMFLGMITAFLSGEIYRRIVQKNLTIKMPAGVPPAVAKSFAALIPAFITLTVFLLINVMVTLFFKTNMHDVIYHAIQAPLVGLGSGIIPTLIAVFFIQILWFFGLHGQIIINSVMDPIWNTLQVENLSAYTAGKEIPHIISKPFMEIYTVGMGGTGMTLAIVFTILIFMKSRQMKQVSKLGLAPGIFNVNEPIIFGLPIVMNPIIIVPWVLAPMVVTLVTYLAMSAGLVPPPTGVTVPWTVPLFINGIMATNSIMGGVMQLINLLIVFVIWFPFLKAMDKLNLAKEKEQAVQETAAQQNDNSIKM	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	442 (412)
Sequences:	2129 (1537)
Seq/√Len:	75.7

ECOLI - PTQC
BACSU - PTEC PTJC YWBA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
84_F	102_G	4.732	1.00
366_V	396_M	4.318	1.00
295_T	327_N	4.242	1.00
356_V	403_I	3.887	1.00
297_A	404_V	3.810	1.00
299_V	330_I	3.032	1.00
266_A	274_P	2.958	1.00
367_P	390_S	2.888	1.00
239_F	343_I	2.879	1.00
391_I	395_V	2.820	1.00
86_I	143_M	2.808	1.00
353_V	404_V	2.801	1.00
352_V	407_I	2.771	1.00
306_M	416_D	2.709	1.00
262_E	275_H	2.544	1.00
79_S	142_G	2.476	1.00
353_V	400_N	2.417	1.00
197_V	208_V	2.391	1.00
356_V	396_M	2.390	1.00
349_A	352_V	2.357	1.00
417_K	421_A	2.301	1.00
94_Y	154_R	2.292	1.00
402_L	406_V	2.236	1.00
192_L	196_M	2.178	1.00
156_I	185_I	2.175	1.00
21_Y	90_L	2.142	1.00
349_A	407_I	2.136	1.00
352_V	403_I	2.122	1.00
83_V	105_A	2.104	1.00
224_I	355_L	2.094	1.00
305_F	409_F	2.062	1.00
91_S	101_G	2.043	1.00
20_R	94_Y	2.020	1.00
421_A	425_E	2.006	1.00
357_T	361_M	1.987	1.00
300_F	401_L	1.968	1.00
419_N	422_K	1.965	1.00
94_Y	151_E	1.939	1.00
242_L	247_I	1.930	1.00
367_P	392_M	1.899	1.00
385_I	394_G	1.890	1.00
396_M	400_N	1.886	1.00
228_L	351_M	1.882	1.00
232_F	351_M	1.880	1.00
399_I	403_I	1.879	1.00
384_G	397_Q	1.848	1.00
308_S	416_D	1.833	1.00
87_G	101_G	1.814	1.00
21_Y	151_E	1.812	1.00
342_I	415_M	1.795	1.00
267_Y	273_I	1.791	1.00
359_L	363_A	1.786	1.00
306_M	412_L	1.786	1.00
420_L	424_K	1.783	1.00
360_A	365_L	1.779	1.00
266_A	273_I	1.766	1.00
357_T	400_N	1.765	1.00
360_A	396_M	1.764	1.00
222_S	275_H	1.764	1.00
301_T	304_I	1.764	1.00
295_T	322_G	1.739	1.00
59_M	63_F	1.724	1.00
388_T	393_G	1.718	1.00
384_G	393_G	1.711	1.00
336_I	342_I	1.687	1.00
6_S	11_P	1.685	1.00
265_S	269_A	1.681	1.00
151_E	154_R	1.676	1.00
297_A	405_F	1.658	1.00
360_A	366_V	1.639	1.00
297_A	401_L	1.633	1.00
349_A	404_V	1.629	1.00
278_S	369_P	1.628	1.00
254_P	258_T	1.623	1.00
236_I	240_F	1.605	1.00
365_L	392_M	1.605	1.00
20_R	93_S	1.573	0.99
381_F	394_G	1.573	0.99
357_T	396_M	1.561	0.99
224_I	228_L	1.545	0.99
415_M	419_N	1.543	0.99
311_M	415_M	1.543	0.99
112_L	145_T	1.540	0.99
97_E	175_K	1.539	0.99
301_T	412_L	1.537	0.99
146_A	150_G	1.536	0.99
154_R	158_Q	1.531	0.99
87_G	102_G	1.525	0.99
228_L	355_L	1.525	0.99
301_T	405_F	1.524	0.99
274_P	368_P	1.518	0.99
392_M	395_V	1.517	0.99
383_N	397_Q	1.508	0.99
406_V	409_F	1.493	0.99
238_W	244_G	1.489	0.99
166_P	169_V	1.489	0.99
365_L	396_M	1.480	0.99
294_M	353_V	1.478	0.99
88_Y	99_V	1.476	0.99
84_F	106_L	1.454	0.99
41_I	45_L	1.450	0.99
51_L	55_M	1.438	0.99
155_R	159_K	1.422	0.99
90_L	151_E	1.418	0.99
87_G	105_A	1.404	0.99
55_M	63_F	1.403	0.99
60_L	63_F	1.401	0.99
4_K	8_F	1.399	0.99
232_F	236_I	1.397	0.99
204_N	207_D	1.396	0.99
245_Q	292_T	1.396	0.99
310_Q	419_N	1.395	0.99
261_V	265_S	1.393	0.99
108_S	190_F	1.392	0.99
25_L	147_F	1.375	0.98
108_S	186_T	1.373	0.98
308_S	423_E	1.361	0.98
156_I	161_L	1.336	0.98
161_L	185_I	1.316	0.98
107_V	187_L	1.315	0.98
381_F	398_L	1.315	0.98
285_Y	361_M	1.314	0.98
312_K	316_K	1.313	0.98
343_I	347_V	1.311	0.98
19_N	151_E	1.309	0.98
358_Y	362_S	1.307	0.98
398_L	402_L	1.307	0.98
356_V	360_A	1.301	0.98
148_L	189_V	1.295	0.98
90_L	94_Y	1.292	0.98
28_A	85_G	1.292	0.98
21_Y	147_F	1.283	0.98
231_V	354_T	1.275	0.97
380_L	401_L	1.272	0.97
355_L	359_L	1.268	0.97
302_I	315_S	1.266	0.97
83_V	146_A	1.259	0.97
331_I	346_W	1.251	0.97
28_A	89_Y	1.251	0.97
296_L	401_L	1.250	0.97
266_A	272_E	1.248	0.97
279_K	283_E	1.248	0.97
390_S	393_G	1.244	0.97
162_T	178_A	1.243	0.97
421_A	424_K	1.228	0.97
301_T	305_F	1.226	0.97
35_L	81_F	1.218	0.97
311_M	419_N	1.217	0.97
132_D	137_K	1.215	0.97
322_G	327_N	1.212	0.97
259_L	275_H	1.207	0.96
341_I	414_A	1.206	0.96
82_V	139_M	1.205	0.96
211_H	215_A	1.202	0.96
267_Y	371_G	1.196	0.96
42_F	70_A	1.192	0.96
356_V	400_N	1.190	0.96
308_S	420_L	1.183	0.96
152_I	186_T	1.179	0.96
309_R	313_Q	1.171	0.96
113_T	206_H	1.167	0.96
83_V	142_G	1.167	0.96
71_S	76_G	1.166	0.96
31_L	85_G	1.166	0.96
47_N	68_G	1.158	0.96
32_A	85_G	1.156	0.95
63_F	67_F	1.151	0.95
301_T	315_S	1.148	0.95
83_V	87_G	1.140	0.95
313_Q	316_K	1.139	0.95
291_G	295_T	1.137	0.95
314_V	318_G	1.116	0.95
83_V	102_G	1.114	0.94
5_I	11_P	1.113	0.94
301_T	409_F	1.113	0.94
37_I	180_L	1.112	0.94
165_M	169_V	1.099	0.94
300_F	405_F	1.098	0.94
39_G	74_T	1.097	0.94
70_A	191_L	1.096	0.94
287_V	354_T	1.094	0.94
266_A	271_K	1.087	0.94
378_V	386_M	1.086	0.94
142_G	146_A	1.086	0.94
381_F	397_Q	1.085	0.94
273_I	371_G	1.084	0.94
413_K	416_D	1.082	0.94
291_G	327_N	1.072	0.93
141_L	206_H	1.072	0.93
165_M	168_G	1.071	0.93
20_R	151_E	1.057	0.93
348_L	352_V	1.054	0.93
380_L	397_Q	1.046	0.92
273_I	368_P	1.035	0.92
264_L	268_T	1.035	0.92
361_M	368_P	1.034	0.92
315_S	412_L	1.029	0.92
265_S	268_T	1.028	0.92
225_I	229_I	1.023	0.92
293_G	327_N	1.023	0.92
290_G	296_L	1.021	0.91
4_K	11_P	1.021	0.91
261_V	264_L	1.014	0.91
250_S	254_P	1.014	0.91
305_F	405_F	1.014	0.91
346_W	408_W	1.013	0.91
104_I	183_A	1.006	0.91
327_N	331_I	1.006	0.91
72_T	76_G	1.003	0.91
51_L	54_I	1.003	0.91
299_V	315_S	1.002	0.91
262_E	266_A	1.000	0.91
5_I	414_A	1.000	0.91
90_L	150_G	0.997	0.90
303_L	315_S	0.997	0.90
28_A	146_A	0.995	0.90
29_F	82_V	0.994	0.90
92_K	98_A	0.994	0.90
145_T	190_F	0.992	0.90
80_V	110_L	0.992	0.90
289_M	294_M	0.991	0.90
148_L	190_F	0.988	0.90
297_A	300_F	0.987	0.90
381_F	384_G	0.986	0.90
89_Y	92_K	0.982	0.90
150_G	154_R	0.982	0.90
28_A	86_I	0.981	0.90
285_Y	388_T	0.975	0.89
264_L	371_G	0.973	0.89
304_I	409_F	0.973	0.89
266_A	269_A	0.972	0.89
96_V	154_R	0.970	0.89
200_F	203_T	0.968	0.89
303_L	319_L	0.968	0.89
253_D	279_K	0.967	0.89
77_I	81_F	0.964	0.89
84_F	99_V	0.964	0.89
196_M	199_L	0.962	0.89
148_L	152_I	0.957	0.89
222_S	259_L	0.957	0.89
294_M	297_A	0.955	0.88
418_L	421_A	0.954	0.88
225_I	228_L	0.953	0.88
231_V	287_V	0.952	0.88
88_Y	98_A	0.952	0.88
400_N	404_V	0.948	0.88
361_M	369_P	0.941	0.88
28_A	147_F	0.930	0.87
290_G	294_M	0.930	0.87
24_V	93_S	0.922	0.87
349_A	353_V	0.922	0.87
230_A	252_M	0.920	0.87
356_V	399_I	0.919	0.86
305_F	412_L	0.919	0.86
46_T	68_G	0.919	0.86
80_V	134_L	0.918	0.86
21_Y	94_Y	0.917	0.86
196_M	200_F	0.915	0.86
360_A	363_A	0.914	0.86
416_D	423_E	0.911	0.86
54_I	57_A	0.906	0.86
181_I	185_I	0.903	0.86
104_I	186_T	0.902	0.85
359_L	362_S	0.900	0.85
366_V	390_S	0.895	0.85
207_D	211_H	0.894	0.85
96_V	158_Q	0.884	0.84
5_I	74_T	0.884	0.84
109_F	142_G	0.883	0.84
304_I	416_D	0.883	0.84
47_N	377_T	0.881	0.84
108_S	149_S	0.881	0.84
330_I	336_I	0.880	0.84
194_N	198_T	0.880	0.84
331_I	336_I	0.879	0.84
360_A	364_G	0.879	0.84
402_L	405_F	0.877	0.84
32_A	82_V	0.875	0.84
7_Q	11_P	0.874	0.84
129_I	134_L	0.871	0.83
43_V	75_M	0.867	0.83
46_T	67_F	0.865	0.83
366_V	392_M	0.864	0.83
54_I	58_S	0.860	0.83
170_P	216_P	0.859	0.83
230_A	248_I	0.859	0.83
290_G	293_G	0.858	0.82
33_F	36_T	0.857	0.82
216_P	329_P	0.851	0.82
412_L	416_D	0.846	0.82
299_V	302_I	0.843	0.81
266_A	270_G	0.840	0.81
395_V	399_I	0.839	0.81
416_D	420_L	0.839	0.81
82_V	86_I	0.838	0.81
391_I	394_G	0.837	0.81
298_I	408_W	0.836	0.81
92_K	95_Q	0.835	0.81
220_L	229_I	0.834	0.81
109_F	134_L	0.831	0.80
322_G	330_I	0.830	0.80
144_I	209_I	0.826	0.80
152_I	189_V	0.825	0.80
174_A	178_A	0.821	0.80
238_W	243_H	0.819	0.79
243_H	328_E	0.816	0.79
285_Y	357_T	0.815	0.79
170_P	329_P	0.814	0.79
79_S	83_V	0.814	0.79
396_M	399_I	0.812	0.79
394_G	397_Q	0.812	0.79
27_D	93_S	0.812	0.79
101_G	153_Y	0.810	0.79
27_D	172_A	0.808	0.79
325_N	376_W	0.805	0.78
145_T	149_S	0.805	0.78
96_V	157_V	0.802	0.78
6_S	10_V	0.801	0.78
98_A	102_G	0.801	0.78
227_T	354_T	0.801	0.78
298_I	412_L	0.801	0.78
55_M	60_L	0.798	0.78
163_I	166_P	0.793	0.77
228_L	232_F	0.791	0.77
374_V	387_A	0.789	0.77
260_Q	280_P	0.788	0.77
152_I	185_I	0.787	0.77
117_I	128_V	0.784	0.76
366_V	393_G	0.784	0.76
289_M	296_L	0.782	0.76
328_E	332_F	0.781	0.76
409_F	412_L	0.776	0.76
297_A	406_V	0.776	0.76
11_P	14_G	0.776	0.76
235_Q	292_T	0.773	0.75
349_A	403_I	0.772	0.75
305_F	312_K	0.771	0.75
163_I	169_V	0.771	0.75
276_I	361_M	0.769	0.75
252_M	256_W	0.767	0.75
203_T	208_V	0.767	0.75
341_I	418_L	0.765	0.75
110_L	134_L	0.765	0.75
161_L	181_I	0.761	0.74
16_L	22_L	0.760	0.74
414_A	418_L	0.759	0.74
420_L	423_E	0.758	0.74
369_P	388_T	0.758	0.74
151_E	155_R	0.755	0.74
364_G	368_P	0.754	0.74
304_I	315_S	0.753	0.73
22_L	338_M	0.753	0.73
12_I	16_L	0.748	0.73
189_V	192_L	0.747	0.73
400_N	403_I	0.747	0.73
22_L	26_R	0.740	0.72
46_T	70_A	0.738	0.72
57_A	60_L	0.738	0.72
293_G	346_W	0.735	0.72
149_S	190_F	0.733	0.71
303_L	316_K	0.730	0.71
360_A	399_I	0.730	0.71
401_L	405_F	0.727	0.71
73_A	110_L	0.726	0.71
213_I	237_L	0.723	0.70
18_N	103_A	0.720	0.70
259_L	262_E	0.720	0.70
133_R	207_D	0.720	0.70
20_R	24_V	0.719	0.70
47_N	50_F	0.715	0.70
157_V	162_T	0.715	0.70
306_M	311_M	0.715	0.70
302_I	412_L	0.712	0.69
165_M	177_F	0.712	0.69
276_I	281_F	0.712	0.69
43_V	71_S	0.711	0.69
350_P	408_W	0.711	0.69
294_M	404_V	0.710	0.69
149_S	186_T	0.708	0.69
220_L	322_G	0.707	0.69
399_I	402_L	0.707	0.69
14_G	18_N	0.705	0.68
422_K	425_E	0.704	0.68
293_G	408_W	0.700	0.68
109_F	113_T	0.700	0.68
170_P	177_F	0.699	0.68
19_N	94_Y	0.698	0.68
267_Y	274_P	0.696	0.68
266_A	368_P	0.695	0.67
311_M	342_I	0.693	0.67
27_D	89_Y	0.691	0.67
178_A	181_I	0.690	0.67
235_Q	288_G	0.689	0.67
302_I	334_L	0.688	0.67
291_G	408_W	0.687	0.66
257_N	261_V	0.685	0.66
305_F	316_K	0.684	0.66
28_A	82_V	0.684	0.66
81_F	107_V	0.684	0.66
30_M	355_L	0.683	0.66
106_L	134_L	0.682	0.66
80_V	106_L	0.680	0.66
285_Y	366_V	0.679	0.66
362_S	367_P	0.678	0.65
5_I	9_L	0.677	0.65
96_V	150_G	0.676	0.65
55_M	58_S	0.670	0.65
299_V	322_G	0.670	0.65
16_L	355_L	0.670	0.65
318_G	330_I	0.668	0.64
348_L	407_I	0.667	0.64
53_K	57_A	0.665	0.64
101_G	150_G	0.663	0.64
285_Y	387_A	0.663	0.64
227_T	282_M	0.662	0.64
195_V	199_L	0.661	0.64
24_V	90_L	0.661	0.64
69_I	194_N	0.659	0.63
405_F	409_F	0.658	0.63
29_F	44_V	0.658	0.63
226_P	240_F	0.656	0.63
384_G	394_G	0.655	0.63
310_Q	416_D	0.653	0.63
403_I	407_I	0.652	0.62
224_I	359_L	0.652	0.62
24_V	28_A	0.651	0.62
299_V	412_L	0.649	0.62
170_P	173_V	0.648	0.62
77_I	80_V	0.648	0.62
58_S	62_S	0.646	0.62
413_K	417_K	0.646	0.62
205_M	208_V	0.646	0.62
281_F	357_T	0.645	0.62
235_Q	346_W	0.642	0.61
22_L	256_W	0.642	0.61
84_F	87_G	0.640	0.61
353_V	357_T	0.639	0.61
157_V	160_N	0.637	0.61
345_P	411_F	0.636	0.61
228_L	354_T	0.635	0.60
53_K	56_N	0.634	0.60
7_Q	232_F	0.634	0.60
238_W	338_M	0.632	0.60
160_N	164_K	0.630	0.60
290_G	327_N	0.630	0.60
314_V	330_I	0.630	0.60
8_F	11_P	0.629	0.60
43_V	46_T	0.629	0.60
166_P	170_P	0.629	0.60
167_A	171_P	0.629	0.60
308_S	311_M	0.629	0.60
141_L	145_T	0.628	0.60
260_Q	373_T	0.628	0.60
308_S	315_S	0.627	0.59
243_H	332_F	0.627	0.59
303_L	334_L	0.626	0.59
381_F	401_L	0.625	0.59
183_A	187_L	0.625	0.59
86_I	147_F	0.624	0.59
55_M	59_M	0.623	0.59
87_G	91_S	0.623	0.59
267_Y	270_G	0.622	0.59
91_S	150_G	0.621	0.59
73_A	111_L	0.621	0.59
303_L	416_D	0.619	0.58
367_P	393_G	0.618	0.58
277_I	358_Y	0.617	0.58
296_L	323_I	0.617	0.58
409_F	413_K	0.616	0.58
117_I	126_T	0.615	0.58
292_T	346_W	0.615	0.58
331_I	337_V	0.611	0.57
23_Q	26_R	0.611	0.57
259_L	278_S	0.611	0.57
290_G	298_I	0.610	0.57
175_K	178_A	0.608	0.57
319_L	323_I	0.608	0.57
101_G	149_S	0.607	0.57
218_V	258_T	0.607	0.57
13_A	19_N	0.607	0.57
68_G	71_S	0.607	0.57
295_T	318_G	0.607	0.57
112_L	190_F	0.607	0.57
37_I	375_P	0.605	0.57
77_I	110_L	0.605	0.57
176_S	180_L	0.602	0.56
403_I	406_V	0.602	0.56
297_A	408_W	0.601	0.56
296_L	322_G	0.601	0.56
311_M	315_S	0.599	0.56
212_A	395_V	0.598	0.56
19_N	90_L	0.598	0.56
51_L	60_L	0.596	0.56
51_L	63_F	0.596	0.56
348_L	351_M	0.595	0.56
315_S	318_G	0.595	0.56
365_L	399_I	0.594	0.55
226_P	239_F	0.592	0.55
300_F	344_V	0.591	0.55
307_K	413_K	0.585	0.54
276_I	358_Y	0.584	0.54
299_V	319_L	0.583	0.54
5_I	8_F	0.581	0.54
238_W	328_E	0.581	0.54
269_A	272_E	0.581	0.54
146_A	149_S	0.580	0.54
369_P	393_G	0.575	0.53
336_I	346_W	0.574	0.53
414_A	417_K	0.570	0.52
413_K	420_L	0.569	0.52
304_I	316_K	0.567	0.52
366_V	400_N	0.567	0.52
78_M	257_N	0.566	0.52
394_G	398_L	0.566	0.52
156_I	160_N	0.565	0.52
4_K	7_Q	0.564	0.52
367_P	394_G	0.561	0.51
238_W	292_T	0.560	0.51
85_G	89_Y	0.560	0.51
26_R	97_E	0.559	0.51
244_G	350_P	0.558	0.51
351_M	355_L	0.557	0.51
173_V	375_P	0.555	0.50
71_S	75_M	0.555	0.50
244_G	346_W	0.554	0.50
234_I	288_G	0.554	0.50
374_V	378_V	0.552	0.50
180_L	375_P	0.551	0.50
109_F	135_G	0.551	0.50
327_N	346_W	0.550	0.50
67_F	191_L	0.550	0.50
208_V	213_I	0.548	0.50
19_N	24_V	0.547	0.49
258_T	262_E	0.546	0.49
231_V	282_M	0.546	0.49
197_V	205_M	0.546	0.49
87_G	150_G	0.545	0.49
306_M	310_Q	0.544	0.49
293_G	350_P	0.544	0.49
311_M	412_L	0.542	0.49
64_Q	68_G	0.542	0.49
318_G	322_G	0.542	0.49
133_R	206_H	0.542	0.49
199_L	202_K	0.541	0.49
258_T	261_V	0.540	0.49
378_V	384_G	0.538	0.48
17_N	22_L	0.538	0.48
90_L	154_R	0.536	0.48
164_K	167_A	0.536	0.48
45_L	189_V	0.535	0.48
106_L	181_I	0.535	0.48
342_I	408_W	0.534	0.48
5_I	128_V	0.534	0.48
309_R	312_K	0.534	0.48
350_P	401_L	0.534	0.48
25_L	139_M	0.534	0.48
111_L	187_L	0.534	0.48
18_N	23_Q	0.534	0.48
280_P	284_I	0.534	0.48
238_W	332_F	0.533	0.48
372_V	375_P	0.533	0.48
311_M	334_L	0.533	0.48
4_K	363_A	0.532	0.48
184_F	188_T	0.532	0.48
280_P	369_P	0.531	0.47
173_V	176_S	0.531	0.47
376_W	380_L	0.530	0.47
191_L	194_N	0.529	0.47
168_G	309_R	0.529	0.47
66_H	191_L	0.527	0.47
8_F	398_L	0.527	0.47
220_L	226_P	0.527	0.47
346_W	350_P	0.527	0.47
320_A	343_I	0.526	0.47
51_L	59_M	0.525	0.47
105_A	108_S	0.525	0.47
218_V	226_P	0.525	0.47
39_G	179_A	0.524	0.47
281_F	396_M	0.524	0.47
374_V	386_M	0.524	0.47
264_L	372_V	0.524	0.47
61_T	64_Q	0.523	0.46
170_P	254_P	0.522	0.46
22_L	27_D	0.521	0.46
95_Q	271_K	0.521	0.46
8_F	307_K	0.520	0.46
22_L	305_F	0.519	0.46
53_K	58_S	0.519	0.46
26_R	30_M	0.518	0.46
186_T	189_V	0.518	0.46
352_V	356_V	0.517	0.46
20_R	37_I	0.517	0.46
152_I	190_F	0.515	0.45
215_A	219_G	0.515	0.45
147_F	151_E	0.514	0.45
285_Y	393_G	0.514	0.45
281_F	361_M	0.513	0.45
56_N	60_L	0.512	0.45
143_M	254_P	0.512	0.45
168_G	320_A	0.512	0.45
304_I	405_F	0.512	0.45
96_V	101_G	0.509	0.45
227_T	277_I	0.509	0.45
271_K	274_P	0.509	0.45
7_Q	348_L	0.508	0.45
5_I	323_I	0.506	0.44
47_N	408_W	0.505	0.44
38_F	187_L	0.504	0.44
20_R	154_R	0.504	0.44
296_L	405_F	0.504	0.44
92_K	97_E	0.504	0.44
375_P	378_V	0.503	0.44
243_H	337_V	0.503	0.44
109_F	165_M	0.502	0.44
366_V	375_P	0.502	0.44
208_V	356_V	0.501	0.44
162_T	175_K	0.500	0.44
37_I	280_P	0.500	0.44

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3qnqA	2	0.9683	100	0.302	Contact Map
3mktA	1	0.3733	28.6	0.972	Contact Map
4humA	1	0.3665	23.6	0.973	Contact Map
4lz6A	1	0.3439	20.7	0.974	Contact Map
3w4tA	1	0.3348	18.1	0.975	Contact Map
1pw4A	1	0.4548	9.3	0.978	Contact Map
2rddB	1	0.0837	8.1	0.978	Contact Map
2kluA	1	0.1267	7.5	0.979	Contact Map
4twkA	2	0.1403	7.3	0.979	Contact Map
2kncA	1	0.1176	6.8	0.979	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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