O16G3 - BACSU - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

O16G3 - Probable oligo-1,6-glucosidase 3

UniProt:	O05242	Sequences: MKKAWWKEAVVYQIYPRSFKDSNGDGIGDIQGIRTKLSYIKELGADVIWICPLYDSPNADNGYDIRDYQNILSEFGTMEDFDELLGDIHDLDMKLIMDLVVNHTSDEHPWFIESRSSIHSEKRDWYIWKDGKNGKTPNNWESIFGGPAWEYDQKTSQYYLHLFDKKQPDLNWENEKVRNAVYDMINWWLDKGIDGFRVDAITHIKKKEGFPDMPNPKGLDYVPSFPYHMNADGIMDLLTELKENTFSRYPIMTVGEANGVAAKEAADWAGEKNGIFSMIFQFEHLGLWDVEINESIDIVAFKRILTDWQDSLEGIGWNALFMENHDQPRSVSVWGDDGVYLKESAKALSAVYFLMKGTPFIYQGQELGMTNVAFPSIEDYDDVALKRLYETKTAKGTSHEDVMKIVWKKGRDNSRTPMQWNAGPYAGFSEAKPWIGINENYKWLNAEAQKNDKTSVYHFYKSLIKLRQTYDVFINGTYELILPEDQQIFAYLRKNESHTALIAANLTGTPALFRHSGLPLSSDALVLSNIETEPHKHMTSVLLKPYEARIYLWC	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	554 (499)
Sequences:	8166 (5410)
Seq/√Len:	242.2

ECOLI - TREC SUCP MALZ GLGX YGAQ AMY2 AMY1 GLGB
BACSU - O16G3 O16G2 O16G1 TREC BBMA GLGB PULA AMY
SULSO - TREZ Q7LX99

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
20_K	36_K	4.901	1.00
38_S	91_L	4.889	1.00
130_D	157_Q	4.753	1.00
82_D	191_K	4.620	1.00
31_Q	83_E	4.169	1.00
89_H	194_D	4.136	1.00
87_D	90_D	4.058	1.00
55_D	70_N	3.719	1.00
104_T	126_Y	3.614	1.00
87_D	91_L	3.405	1.00
350_A	459_F	3.315	1.00
20_K	35_T	3.241	1.00
88_I	95_L	3.105	1.00
40_I	45_A	3.082	1.00
55_D	66_R	3.025	1.00
31_Q	34_R	2.997	1.00
88_I	93_M	2.893	1.00
150_E	165_K	2.792	1.00
178_R	240_E	2.788	1.00
81_F	85_L	2.633	1.00
123_R	155_T	2.598	1.00
77_T	80_D	2.558	1.00
367_L	446_A	2.470	1.00
458_H	461_K	2.435	1.00
78_M	191_K	2.395	1.00
34_R	87_D	2.393	1.00
42_E	461_K	2.380	1.00
107_E	166_K	2.369	1.00
59_A	166_K	2.360	1.00
235_M	275_I	2.353	1.00
323_E	365_Q	2.340	1.00
350_A	548_A	2.336	1.00
14_I	33_I	2.308	1.00
479_E	492_L	2.278	1.00
69_Q	183_D	2.276	1.00
115_R	152_D	2.212	1.00
31_Q	80_D	2.210	1.00
109_P	113_E	2.192	1.00
492_L	499_T	2.177	1.00
83_E	87_D	2.139	1.00
104_T	170_L	2.124	1.00
465_K	469_T	2.121	1.00
24_G	430_E	2.112	1.00
347_A	504_A	2.091	1.00
101_V	181_V	2.077	1.00
9_A	46_D	2.071	1.00
152_D	155_T	2.048	1.00
180_A	183_D	2.032	1.00
151_Y	156_S	1.997	1.00
37_L	91_L	1.965	1.00
375_P	379_D	1.921	1.00
233_G	236_D	1.915	1.00
185_I	241_L	1.914	1.00
125_W	180_A	1.907	1.00
351_V	504_A	1.906	1.00
451_N	458_H	1.904	1.00
331_V	345_A	1.889	1.00
34_R	83_E	1.884	1.00
186_N	248_R	1.860	1.00
494_K	499_T	1.856	1.00
46_D	468_Q	1.855	1.00
113_E	116_S	1.851	1.00
422_A	447_E	1.847	1.00
53_L	97_M	1.843	1.00
33_I	84_L	1.842	1.00
544_K	547_E	1.840	1.00
59_A	164_D	1.831	1.00
48_I	88_I	1.829	1.00
349_S	460_Y	1.807	1.00
42_E	450_K	1.804	1.00
379_D	436_G	1.772	1.00
450_K	457_Y	1.757	1.00
479_E	494_K	1.744	1.00
182_Y	240_E	1.742	1.00
490_A	503_A	1.725	1.00
477_T	494_K	1.719	1.00
37_L	88_I	1.715	1.00
342_K	346_K	1.713	1.00
41_K	91_L	1.707	1.00
354_L	491_Y	1.706	1.00
189_L	251_I	1.703	1.00
70_N	78_M	1.698	1.00
113_E	120_S	1.692	1.00
421_N	447_E	1.684	1.00
381_D	435_I	1.672	1.00
173_E	233_G	1.660	1.00
27_I	74_E	1.659	1.00
79_E	82_D	1.653	1.00
106_D	166_K	1.650	1.00
492_L	501_L	1.635	1.00
86_G	90_D	1.634	1.00
525_L	528_S	1.628	1.00
113_E	122_K	1.626	1.00
11_V	47_V	1.620	1.00
42_E	457_Y	1.597	1.00
10_V	464_I	1.595	1.00
53_L	71_I	1.580	1.00
186_N	190_D	1.575	1.00
109_P	112_I	1.550	1.00
117_S	120_S	1.548	1.00
179_N	183_D	1.546	1.00
186_N	244_N	1.542	1.00
8_E	475_N	1.541	1.00
122_K	125_W	1.531	1.00
487_Q	507_T	1.528	1.00
69_Q	187_W	1.527	1.00
31_Q	35_T	1.505	1.00
425_Y	431_A	1.500	1.00
512_L	542_L	1.493	1.00
512_L	540_S	1.489	1.00
121_E	176_K	1.486	1.00
242_K	246_F	1.483	1.00
4_A	7_K	1.478	1.00
446_A	457_Y	1.476	1.00
69_Q	184_M	1.475	1.00
54_Y	97_M	1.465	1.00
55_D	67_D	1.461	1.00
81_F	97_M	1.457	1.00
370_T	440_N	1.456	1.00
457_Y	461_K	1.446	1.00
179_N	244_N	1.446	1.00
450_K	458_H	1.434	1.00
58_N	72_L	1.415	1.00
59_A	107_E	1.414	1.00
180_A	184_M	1.396	1.00
368_G	456_V	1.384	1.00
449_Q	458_H	1.383	1.00
239_T	274_G	1.381	1.00
425_Y	429_S	1.380	1.00
104_T	177_V	1.379	1.00
67_D	70_N	1.377	1.00
69_Q	180_A	1.374	1.00
306_T	478_Y	1.367	1.00
239_T	275_I	1.363	1.00
354_L	473_F	1.357	1.00
34_R	84_L	1.354	1.00
53_L	81_F	1.353	1.00
246_F	249_Y	1.352	1.00
472_V	500_A	1.349	1.00
462_S	465_K	1.349	1.00
233_G	237_L	1.342	1.00
242_K	247_S	1.341	1.00
123_R	152_D	1.335	1.00
132_K	135_K	1.331	1.00
9_A	47_V	1.328	1.00
452_D	458_H	1.320	1.00
176_K	179_N	1.309	1.00
504_A	548_A	1.306	1.00
114_S	155_T	1.304	1.00
106_D	168_P	1.296	1.00
8_E	474_I	1.291	1.00
510_P	542_L	1.288	1.00
323_E	330_S	1.284	1.00
267_D	273_N	1.283	1.00
81_F	193_I	1.282	1.00
190_D	248_R	1.276	1.00
303_R	307_D	1.268	1.00
347_A	506_L	1.267	1.00
14_I	40_I	1.265	1.00
190_D	249_Y	1.261	1.00
330_S	334_W	1.257	1.00
96_I	252_M	1.252	1.00
55_D	73_S	1.245	1.00
346_K	459_F	1.237	1.00
33_I	50_I	1.233	1.00
264_E	267_D	1.231	1.00
132_K	212_D	1.226	1.00
369_M	419_Q	1.225	1.00
40_I	48_I	1.223	1.00
317_W	358_T	1.222	1.00
13_Q	51_C	1.221	1.00
112_I	115_R	1.219	1.00
82_D	86_G	1.216	1.00
322_M	348_L	1.208	1.00
350_A	463_L	1.207	1.00
487_Q	511_A	1.199	1.00
418_M	446_A	1.196	1.00
500_A	526_V	1.190	1.00
58_N	74_E	1.189	1.00
491_Y	502_I	1.188	1.00
342_K	452_D	1.183	1.00
175_E	179_N	1.180	1.00
16_P	33_I	1.175	1.00
470_Y	498_H	1.174	1.00
101_V	185_I	1.171	1.00
380_Y	407_W	1.166	1.00
17_R	74_E	1.150	1.00
300_A	303_R	1.150	1.00
107_E	112_I	1.143	1.00
306_T	310_D	1.142	1.00
525_L	530_I	1.139	1.00
198_V	276_F	1.137	1.00
461_K	465_K	1.136	1.00
179_N	182_Y	1.135	1.00
353_F	464_I	1.131	1.00
530_I	544_K	1.130	1.00
124_D	174_N	1.130	1.00
189_L	249_Y	1.119	1.00
116_S	120_S	1.115	1.00
381_D	386_K	1.114	1.00
473_F	500_A	1.114	1.00
131_G	151_Y	1.109	1.00
244_N	248_R	1.107	1.00
345_A	456_V	1.100	1.00
139_N	212_D	1.093	1.00
114_S	128_W	1.092	1.00
475_N	495_N	1.091	1.00
514_R	540_S	1.090	1.00
71_I	81_F	1.087	1.00
55_D	72_L	1.086	1.00
112_I	116_S	1.085	1.00
354_L	463_L	1.084	1.00
163_F	203_H	1.083	1.00
101_V	198_V	1.078	1.00
373_A	407_W	1.077	1.00
172_W	181_V	1.074	1.00
380_Y	385_L	1.071	1.00
205_K	233_G	1.065	1.00
239_T	273_N	1.062	1.00
306_T	480_L	1.058	1.00
117_S	155_T	1.054	1.00
153_Q	156_S	1.053	1.00
120_S	123_R	1.046	1.00
254_V	360_F	1.046	1.00
30_I	53_L	1.041	1.00
131_G	137_P	1.041	1.00
16_P	50_I	1.039	1.00
50_I	53_L	1.034	1.00
113_E	117_S	1.025	1.00
34_R	38_S	1.022	1.00
30_I	71_I	1.018	1.00
96_I	195_G	1.017	1.00
472_V	495_N	1.017	1.00
336_D	508_G	1.013	1.00
21_D	26_G	1.012	1.00
201_I	204_I	1.011	1.00
299_V	486_Q	1.009	1.00
45_A	93_M	1.002	1.00
99_L	185_I	0.995	1.00
178_R	237_L	0.989	1.00
205_K	231_A	0.989	1.00
41_K	93_M	0.984	1.00
16_P	51_C	0.982	1.00
116_S	154_K	0.980	1.00
297_D	300_A	0.978	1.00
532_T	544_K	0.977	1.00
132_K	137_P	0.973	1.00
136_T	147_P	0.972	1.00
205_K	237_L	0.972	1.00
118_I	157_Q	0.971	1.00
173_E	237_L	0.969	1.00
470_Y	500_A	0.968	1.00
78_M	187_W	0.967	1.00
22_S	31_Q	0.966	1.00
351_V	506_L	0.964	1.00
36_K	39_Y	0.962	1.00
252_M	278_M	0.962	1.00
79_E	83_E	0.960	1.00
131_G	136_T	0.958	1.00
30_I	81_F	0.957	1.00
164_D	167_Q	0.956	1.00
472_V	498_H	0.954	1.00
148_A	160_L	0.950	1.00
125_W	176_K	0.950	1.00
422_A	425_Y	0.949	1.00
379_D	432_K	0.948	1.00
207_K	211_P	0.947	1.00
329_R	332_S	0.947	1.00
528_S	531_E	0.946	1.00
187_W	191_K	0.946	1.00
200_A	203_H	0.946	1.00
24_G	431_A	0.938	1.00
471_D	475_N	0.937	1.00
353_F	359_P	0.937	1.00
239_T	243_E	0.936	1.00
147_P	150_E	0.935	1.00
58_N	75_F	0.930	1.00
182_Y	244_N	0.929	1.00
487_Q	509_T	0.926	1.00
59_A	106_D	0.925	1.00
85_L	95_L	0.925	1.00
346_K	456_V	0.924	1.00
41_K	92_D	0.924	1.00
450_K	461_K	0.923	1.00
485_D	511_A	0.920	1.00
184_M	187_W	0.918	1.00
47_V	252_M	0.918	1.00
80_D	83_E	0.917	1.00
45_A	48_I	0.917	1.00
178_R	182_Y	0.912	1.00
299_V	303_R	0.911	1.00
507_T	511_A	0.909	1.00
11_V	360_F	0.908	1.00
335_G	344_S	0.900	1.00
138_N	142_S	0.899	1.00
262_A	311_S	0.898	1.00
57_P	66_R	0.897	1.00
113_E	121_E	0.896	1.00
447_E	451_N	0.894	1.00
525_L	529_N	0.893	1.00
129_K	210_F	0.891	1.00
17_R	58_N	0.889	1.00
255_G	276_F	0.888	1.00
422_A	448_A	0.888	1.00
37_L	87_D	0.885	1.00
201_I	238_L	0.885	1.00
185_I	245_T	0.885	1.00
530_I	547_E	0.885	1.00
458_H	462_S	0.884	1.00
23_N	27_I	0.881	0.99
340_Y	343_E	0.880	0.99
181_V	184_M	0.879	0.99
39_Y	446_A	0.879	0.99
84_L	95_L	0.877	0.99
115_R	154_K	0.871	0.99
182_Y	241_L	0.870	0.99
138_N	209_G	0.866	0.99
83_E	86_G	0.865	0.99
34_R	91_L	0.864	0.99
40_I	93_M	0.864	0.99
480_L	483_P	0.861	0.99
118_I	155_T	0.861	0.99
244_N	247_S	0.857	0.99
13_Q	16_P	0.855	0.99
417_P	420_W	0.854	0.99
446_A	450_K	0.853	0.99
481_I	501_L	0.850	0.99
142_S	146_G	0.850	0.99
10_V	45_A	0.848	0.99
78_M	82_D	0.847	0.99
21_D	25_D	0.846	0.99
88_I	91_L	0.845	0.99
122_K	176_K	0.844	0.99
30_I	84_L	0.842	0.99
238_L	241_L	0.841	0.99
151_Y	155_T	0.841	0.99
114_S	123_R	0.841	0.99
283_E	307_D	0.840	0.99
137_P	140_W	0.839	0.99
118_I	130_D	0.838	0.99
97_M	193_I	0.837	0.99
230_N	264_E	0.836	0.99
207_K	210_F	0.831	0.99
72_L	75_F	0.830	0.99
114_S	120_S	0.829	0.99
50_I	81_F	0.825	0.99
297_D	486_Q	0.824	0.99
245_T	249_Y	0.824	0.99
385_L	410_G	0.823	0.99
481_I	492_L	0.822	0.99
124_D	171_N	0.822	0.99
523_D	528_S	0.821	0.99
367_L	419_Q	0.821	0.99
22_S	25_D	0.821	0.99
123_R	157_Q	0.821	0.99
429_S	433_P	0.815	0.99
419_Q	437_I	0.813	0.99
503_A	541_V	0.812	0.99
449_Q	452_D	0.811	0.99
494_K	497_S	0.811	0.99
30_I	80_D	0.805	0.99
361_I	460_Y	0.805	0.99
482_L	485_D	0.804	0.99
385_L	407_W	0.803	0.99
244_N	249_Y	0.801	0.99
245_T	248_R	0.795	0.99
116_S	122_K	0.794	0.99
117_S	123_R	0.794	0.99
478_Y	489_F	0.789	0.99
38_S	87_D	0.786	0.99
367_L	449_Q	0.782	0.99
305_L	355_M	0.781	0.99
329_R	334_W	0.780	0.99
523_D	526_V	0.778	0.99
352_Y	359_P	0.777	0.99
164_D	169_D	0.775	0.99
488_I	513_F	0.775	0.99
313_E	356_K	0.773	0.99
302_K	306_T	0.773	0.99
20_K	32_G	0.773	0.99
85_L	193_I	0.772	0.99
4_A	475_N	0.772	0.99
39_Y	457_Y	0.772	0.99
459_F	548_A	0.771	0.99
299_V	302_K	0.771	0.99
203_H	229_M	0.768	0.99
16_P	30_I	0.767	0.99
5_W	9_A	0.766	0.99
445_N	448_A	0.766	0.99
322_M	351_V	0.765	0.99
490_A	501_L	0.762	0.99
443_W	448_A	0.758	0.98
10_V	353_F	0.757	0.98
372_V	380_Y	0.756	0.98
199_D	326_D	0.754	0.98
47_V	94_K	0.753	0.98
86_G	89_H	0.753	0.98
246_F	253_T	0.753	0.98
243_E	247_S	0.751	0.98
81_F	84_L	0.750	0.98
278_M	358_T	0.750	0.98
440_N	444_L	0.749	0.98
295_S	300_A	0.749	0.98
258_N	327_Q	0.748	0.98
267_D	270_G	0.748	0.98
165_K	169_D	0.748	0.98
337_D	340_Y	0.747	0.98
471_D	498_H	0.747	0.98
419_Q	426_A	0.747	0.98
137_P	142_S	0.745	0.98
421_N	425_Y	0.743	0.98
131_G	135_K	0.739	0.98
270_G	274_G	0.739	0.98
429_S	432_K	0.739	0.98
269_A	316_G	0.739	0.98
353_F	463_L	0.735	0.98
354_L	502_I	0.735	0.98
280_F	360_F	0.735	0.98
101_V	184_M	0.734	0.98
528_S	547_E	0.732	0.98
163_F	167_Q	0.730	0.98
202_T	257_A	0.727	0.98
510_P	544_K	0.726	0.98
110_W	170_L	0.724	0.98
350_A	354_L	0.721	0.98
38_S	42_E	0.720	0.98
37_L	48_I	0.720	0.98
523_D	527_L	0.719	0.98
197_R	326_D	0.717	0.98
120_S	155_T	0.716	0.98
370_T	444_L	0.713	0.98
94_K	194_D	0.711	0.98
416_T	419_Q	0.711	0.98
332_S	335_G	0.710	0.98
471_D	474_I	0.708	0.98
415_R	419_Q	0.708	0.98
78_M	81_F	0.707	0.98
331_V	334_W	0.702	0.97
508_G	546_Y	0.702	0.97
331_V	335_G	0.700	0.97
526_V	529_N	0.700	0.97
453_K	458_H	0.700	0.97
124_D	127_I	0.697	0.97
170_L	177_V	0.696	0.97
264_E	269_A	0.696	0.97
426_A	437_I	0.695	0.97
179_N	240_E	0.693	0.97
46_D	93_M	0.693	0.97
189_L	245_T	0.692	0.97
118_I	123_R	0.692	0.97
167_Q	171_N	0.692	0.97
495_N	498_H	0.691	0.97
22_S	84_L	0.689	0.97
95_L	194_D	0.689	0.97
9_A	94_K	0.689	0.97
11_V	96_I	0.686	0.97
342_K	456_V	0.686	0.97
525_L	532_T	0.684	0.97
525_L	531_E	0.684	0.97
235_M	239_T	0.683	0.97
287_L	304_I	0.683	0.97
171_N	174_N	0.682	0.97
343_E	530_I	0.682	0.97
169_D	172_W	0.679	0.97
237_L	241_L	0.679	0.97
142_S	148_A	0.678	0.97
4_A	8_E	0.678	0.97
102_N	169_D	0.676	0.97
415_R	418_M	0.676	0.97
349_S	456_V	0.675	0.97
341_L	449_Q	0.675	0.97
22_S	33_I	0.674	0.97
466_L	470_Y	0.673	0.97
179_N	186_N	0.673	0.97
28_G	32_G	0.672	0.97
343_E	346_K	0.672	0.97
422_A	445_N	0.671	0.97
448_A	452_D	0.669	0.97
22_S	35_T	0.668	0.97
336_D	339_V	0.668	0.97
37_L	93_M	0.664	0.96
115_R	155_T	0.664	0.96
309_Q	356_K	0.664	0.96
202_T	258_N	0.664	0.96
524_A	528_S	0.663	0.96
173_E	205_K	0.663	0.96
270_G	273_N	0.661	0.96
204_I	234_I	0.659	0.96
280_F	285_L	0.657	0.96
322_M	330_S	0.655	0.96
373_A	380_Y	0.654	0.96
137_P	141_E	0.653	0.96
292_I	295_S	0.653	0.96
100_V	103_H	0.652	0.96
492_L	495_N	0.651	0.96
421_N	445_N	0.651	0.96
132_K	136_T	0.649	0.96
58_N	61_N	0.648	0.96
89_H	94_K	0.646	0.96
164_D	383_V	0.646	0.96
528_S	532_T	0.646	0.96
350_A	504_A	0.644	0.96
411_R	415_R	0.644	0.96
31_Q	77_T	0.644	0.96
186_N	249_Y	0.643	0.96
322_M	352_Y	0.643	0.96
342_K	454_T	0.641	0.96
185_I	198_V	0.641	0.96
380_Y	410_G	0.639	0.96
365_Q	460_Y	0.638	0.96
47_V	96_I	0.636	0.95
164_D	168_P	0.636	0.95
300_A	304_I	0.636	0.95
436_G	439_E	0.635	0.95
63_Y	199_D	0.634	0.95
284_H	301_F	0.633	0.95
478_Y	481_I	0.632	0.95
85_L	97_M	0.632	0.95
140_W	144_F	0.631	0.95
4_A	250_P	0.630	0.95
329_R	335_G	0.629	0.95
283_E	286_G	0.629	0.95
372_V	375_P	0.628	0.95
29_D	32_G	0.628	0.95
361_I	464_I	0.627	0.95
128_W	152_D	0.627	0.95
142_S	145_G	0.627	0.95
114_S	122_K	0.627	0.95
384_A	388_L	0.625	0.95
523_D	532_T	0.625	0.95
385_L	388_L	0.623	0.95
39_Y	45_A	0.622	0.95
425_Y	432_K	0.622	0.95
514_R	517_G	0.621	0.95
50_I	84_L	0.620	0.95
524_A	530_I	0.620	0.95
200_A	204_I	0.620	0.95
294_E	300_A	0.619	0.95
524_A	532_T	0.616	0.95
339_V	343_E	0.615	0.95
329_R	333_V	0.615	0.95
63_Y	326_D	0.614	0.95
240_E	243_E	0.614	0.95
288_W	409_K	0.612	0.94
199_D	325_H	0.612	0.94
176_K	180_A	0.612	0.94
108_H	111_F	0.611	0.94
380_Y	383_V	0.609	0.94
503_A	543_L	0.608	0.94
421_N	424_P	0.608	0.94
63_Y	197_R	0.607	0.94
310_D	479_E	0.607	0.94
21_D	29_D	0.606	0.94
39_Y	450_K	0.604	0.94
143_I	229_M	0.603	0.94
166_K	169_D	0.603	0.94
449_Q	455_S	0.603	0.94
30_I	33_I	0.602	0.94
186_N	245_T	0.601	0.94
441_Y	445_N	0.601	0.94
524_A	529_N	0.600	0.94
34_R	88_I	0.599	0.94
162_L	203_H	0.599	0.94
480_L	484_E	0.599	0.94
99_L	198_V	0.598	0.94
415_R	420_W	0.598	0.94
422_A	426_A	0.598	0.94
186_N	247_S	0.597	0.94
48_I	93_M	0.597	0.94
138_N	148_A	0.596	0.94
529_N	532_T	0.596	0.94
363_Q	418_M	0.596	0.94
66_R	107_E	0.594	0.94
139_N	142_S	0.594	0.94
354_L	504_A	0.593	0.94
70_N	79_E	0.593	0.94
25_D	29_D	0.593	0.94
208_E	211_P	0.592	0.93
528_S	533_E	0.591	0.93
165_K	171_N	0.590	0.93
524_A	527_L	0.588	0.93
388_L	407_W	0.588	0.93
177_V	184_M	0.588	0.93
138_N	141_E	0.587	0.93
269_A	273_N	0.586	0.93
115_R	118_I	0.586	0.93
197_R	325_H	0.584	0.93
167_Q	172_W	0.584	0.93
296_I	300_A	0.584	0.93
440_N	443_W	0.582	0.93
271_E	274_G	0.581	0.93
305_L	489_F	0.581	0.93
266_A	315_I	0.579	0.93
353_F	365_Q	0.579	0.93
114_S	152_D	0.578	0.93
136_T	140_W	0.574	0.92
65_I	100_V	0.574	0.92
413_N	417_P	0.573	0.92
202_T	260_V	0.572	0.92
367_L	456_V	0.571	0.92
527_L	530_I	0.571	0.92
473_F	476_G	0.571	0.92
477_T	492_L	0.571	0.92
448_A	451_N	0.570	0.92
255_G	279_I	0.570	0.92
285_L	321_F	0.570	0.92
23_N	29_D	0.568	0.92
288_W	291_E	0.568	0.92
177_V	180_A	0.568	0.92
16_P	75_F	0.568	0.92
20_K	430_E	0.567	0.92
304_I	307_D	0.566	0.92
57_P	107_E	0.566	0.92
454_T	458_H	0.566	0.92
410_G	414_S	0.565	0.92
344_S	546_Y	0.565	0.92
301_F	305_L	0.564	0.92
380_Y	409_K	0.564	0.92
385_L	409_K	0.564	0.92
248_R	251_I	0.564	0.92
138_N	210_F	0.562	0.92
330_S	365_Q	0.562	0.92
449_Q	457_Y	0.562	0.92
181_V	201_I	0.561	0.92
22_S	29_D	0.561	0.92
478_Y	491_Y	0.561	0.92
372_V	407_W	0.560	0.91
140_W	143_I	0.560	0.91
123_R	126_Y	0.559	0.91
241_L	248_R	0.559	0.91
182_Y	186_N	0.559	0.91
237_L	240_E	0.558	0.91
183_D	186_N	0.558	0.91
138_N	208_E	0.557	0.91
353_F	361_I	0.557	0.91
330_S	348_L	0.557	0.91
139_N	143_I	0.557	0.91
426_A	441_Y	0.557	0.91
349_S	361_I	0.557	0.91
17_R	75_F	0.556	0.91
230_N	268_W	0.556	0.91
424_P	429_S	0.556	0.91
121_E	125_W	0.555	0.91
152_D	157_Q	0.555	0.91
85_L	194_D	0.555	0.91
198_V	246_F	0.554	0.91
287_L	296_I	0.553	0.91
234_I	268_W	0.553	0.91
143_I	203_H	0.553	0.91
85_L	191_K	0.551	0.91
30_I	50_I	0.550	0.91
508_G	545_P	0.546	0.90
116_S	152_D	0.546	0.90
128_W	131_G	0.545	0.90
131_G	158_Y	0.545	0.90
234_I	238_L	0.544	0.90
116_S	119_H	0.544	0.90
85_L	89_H	0.544	0.90
173_E	208_E	0.544	0.90
422_A	442_K	0.544	0.90
481_I	484_E	0.543	0.90
125_W	128_W	0.543	0.90
42_E	465_K	0.543	0.90
178_R	205_K	0.543	0.90
42_E	458_H	0.540	0.90
138_N	211_P	0.540	0.90
240_E	244_N	0.539	0.90
48_I	84_L	0.539	0.90
454_T	462_S	0.539	0.90
34_R	80_D	0.538	0.90
127_I	130_D	0.537	0.90
424_P	430_E	0.537	0.90
137_P	144_F	0.536	0.90
89_H	95_L	0.534	0.89
10_V	359_P	0.533	0.89
236_D	239_T	0.533	0.89
71_I	78_M	0.532	0.89
14_I	51_C	0.532	0.89
414_S	418_M	0.532	0.89
103_H	325_H	0.532	0.89
304_I	308_W	0.531	0.89
421_N	441_Y	0.531	0.89
425_Y	437_I	0.529	0.89
47_V	93_M	0.528	0.89
138_N	144_F	0.528	0.89
425_Y	445_N	0.528	0.89
337_D	341_L	0.527	0.89
124_D	128_W	0.527	0.89
310_D	313_E	0.527	0.89
480_L	489_F	0.527	0.89
103_H	197_R	0.526	0.89
307_D	311_S	0.526	0.89
410_G	413_N	0.526	0.89
543_L	547_E	0.525	0.89
55_D	75_F	0.525	0.89
242_K	253_T	0.523	0.88
17_R	72_L	0.523	0.88
303_R	306_T	0.523	0.88
414_S	417_P	0.523	0.88
199_D	256_E	0.522	0.88
254_V	280_F	0.522	0.88
11_V	252_M	0.522	0.88
119_H	122_K	0.521	0.88
296_I	299_V	0.520	0.88
122_K	180_A	0.520	0.88
347_A	546_Y	0.519	0.88
167_Q	170_L	0.519	0.88
466_L	526_V	0.519	0.88
481_I	490_A	0.518	0.88
345_A	349_S	0.518	0.88
39_Y	42_E	0.518	0.88
527_L	532_T	0.517	0.88
321_F	324_N	0.515	0.88
136_T	139_N	0.515	0.88
282_F	285_L	0.514	0.88
99_L	184_M	0.513	0.87
162_L	228_H	0.513	0.87
232_D	236_D	0.512	0.87
63_Y	325_H	0.512	0.87
197_R	256_E	0.512	0.87
373_A	439_E	0.511	0.87
285_L	288_W	0.511	0.87
79_E	191_K	0.510	0.87
117_S	122_K	0.510	0.87
6_W	9_A	0.510	0.87
423_G	447_E	0.510	0.87
488_I	511_A	0.509	0.87
538_M	541_V	0.509	0.87
207_K	231_A	0.509	0.87
234_I	237_L	0.508	0.87
414_S	420_W	0.508	0.87
242_K	277_S	0.507	0.87
103_H	199_D	0.507	0.87
266_A	269_A	0.507	0.87
257_A	260_V	0.507	0.87
9_A	96_I	0.506	0.87
388_L	409_K	0.506	0.87
257_A	279_I	0.506	0.87
414_S	419_Q	0.506	0.87
165_K	168_P	0.505	0.87
63_Y	256_E	0.505	0.87
281_Q	286_G	0.505	0.87
426_A	445_N	0.504	0.87
374_F	442_K	0.504	0.87
330_S	460_Y	0.502	0.86
11_V	358_T	0.502	0.86
319_A	360_F	0.502	0.86
279_I	283_E	0.500	0.86

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2ze0A	2	0.9567	100	0.127	Contact Map
1uokA	1	0.9964	100	0.146	Contact Map
4mb1A	1	0.9856	100	0.156	Contact Map
4hphA	1	0.9928	100	0.168	Contact Map
4aieA	1	0.9585	100	0.17	Contact Map
2zicA	1	0.9531	100	0.171	Contact Map
3aj7A	1	0.9964	100	0.174	Contact Map
1zjaA	1	0.9928	100	0.175	Contact Map
3wy2A	1	0.9404	100	0.18	Contact Map
3zo9A	4	0.9043	100	0.213	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0128 seconds.