GREMLIN Database
O16G3 - Probable oligo-1,6-glucosidase 3
UniProt: O05242 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 554 (499)
Sequences: 8166 (5410)
Seq/√Len: 242.2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
20_K36_K4.9011.00
38_S91_L4.8891.00
130_D157_Q4.7531.00
82_D191_K4.6201.00
31_Q83_E4.1691.00
89_H194_D4.1361.00
87_D90_D4.0581.00
55_D70_N3.7191.00
104_T126_Y3.6141.00
87_D91_L3.4051.00
350_A459_F3.3151.00
20_K35_T3.2411.00
88_I95_L3.1051.00
40_I45_A3.0821.00
55_D66_R3.0251.00
31_Q34_R2.9971.00
88_I93_M2.8931.00
150_E165_K2.7921.00
178_R240_E2.7881.00
81_F85_L2.6331.00
123_R155_T2.5981.00
77_T80_D2.5581.00
367_L446_A2.4701.00
458_H461_K2.4351.00
78_M191_K2.3951.00
34_R87_D2.3931.00
42_E461_K2.3801.00
107_E166_K2.3691.00
59_A166_K2.3601.00
235_M275_I2.3531.00
323_E365_Q2.3401.00
350_A548_A2.3361.00
14_I33_I2.3081.00
479_E492_L2.2781.00
69_Q183_D2.2761.00
115_R152_D2.2121.00
31_Q80_D2.2101.00
109_P113_E2.1921.00
492_L499_T2.1771.00
83_E87_D2.1391.00
104_T170_L2.1241.00
465_K469_T2.1211.00
24_G430_E2.1121.00
347_A504_A2.0911.00
101_V181_V2.0771.00
9_A46_D2.0711.00
152_D155_T2.0481.00
180_A183_D2.0321.00
151_Y156_S1.9971.00
37_L91_L1.9651.00
375_P379_D1.9211.00
233_G236_D1.9151.00
185_I241_L1.9141.00
125_W180_A1.9071.00
351_V504_A1.9061.00
451_N458_H1.9041.00
331_V345_A1.8891.00
34_R83_E1.8841.00
186_N248_R1.8601.00
494_K499_T1.8561.00
46_D468_Q1.8551.00
113_E116_S1.8511.00
422_A447_E1.8471.00
53_L97_M1.8431.00
33_I84_L1.8421.00
544_K547_E1.8401.00
59_A164_D1.8311.00
48_I88_I1.8291.00
349_S460_Y1.8071.00
42_E450_K1.8041.00
379_D436_G1.7721.00
450_K457_Y1.7571.00
479_E494_K1.7441.00
182_Y240_E1.7421.00
490_A503_A1.7251.00
477_T494_K1.7191.00
37_L88_I1.7151.00
342_K346_K1.7131.00
41_K91_L1.7071.00
354_L491_Y1.7061.00
189_L251_I1.7031.00
70_N78_M1.6981.00
113_E120_S1.6921.00
421_N447_E1.6841.00
381_D435_I1.6721.00
173_E233_G1.6601.00
27_I74_E1.6591.00
79_E82_D1.6531.00
106_D166_K1.6501.00
492_L501_L1.6351.00
86_G90_D1.6341.00
525_L528_S1.6281.00
113_E122_K1.6261.00
11_V47_V1.6201.00
42_E457_Y1.5971.00
10_V464_I1.5951.00
53_L71_I1.5801.00
186_N190_D1.5751.00
109_P112_I1.5501.00
117_S120_S1.5481.00
179_N183_D1.5461.00
186_N244_N1.5421.00
8_E475_N1.5411.00
122_K125_W1.5311.00
487_Q507_T1.5281.00
69_Q187_W1.5271.00
31_Q35_T1.5051.00
425_Y431_A1.5001.00
512_L542_L1.4931.00
512_L540_S1.4891.00
121_E176_K1.4861.00
242_K246_F1.4831.00
4_A7_K1.4781.00
446_A457_Y1.4761.00
69_Q184_M1.4751.00
54_Y97_M1.4651.00
55_D67_D1.4611.00
81_F97_M1.4571.00
370_T440_N1.4561.00
457_Y461_K1.4461.00
179_N244_N1.4461.00
450_K458_H1.4341.00
58_N72_L1.4151.00
59_A107_E1.4141.00
180_A184_M1.3961.00
368_G456_V1.3841.00
449_Q458_H1.3831.00
239_T274_G1.3811.00
425_Y429_S1.3801.00
104_T177_V1.3791.00
67_D70_N1.3771.00
69_Q180_A1.3741.00
306_T478_Y1.3671.00
239_T275_I1.3631.00
354_L473_F1.3571.00
34_R84_L1.3541.00
53_L81_F1.3531.00
246_F249_Y1.3521.00
472_V500_A1.3491.00
462_S465_K1.3491.00
233_G237_L1.3421.00
242_K247_S1.3411.00
123_R152_D1.3351.00
132_K135_K1.3311.00
9_A47_V1.3281.00
452_D458_H1.3201.00
176_K179_N1.3091.00
504_A548_A1.3061.00
114_S155_T1.3041.00
106_D168_P1.2961.00
8_E474_I1.2911.00
510_P542_L1.2881.00
323_E330_S1.2841.00
267_D273_N1.2831.00
81_F193_I1.2821.00
190_D248_R1.2761.00
303_R307_D1.2681.00
347_A506_L1.2671.00
14_I40_I1.2651.00
190_D249_Y1.2611.00
330_S334_W1.2571.00
96_I252_M1.2521.00
55_D73_S1.2451.00
346_K459_F1.2371.00
33_I50_I1.2331.00
264_E267_D1.2311.00
132_K212_D1.2261.00
369_M419_Q1.2251.00
40_I48_I1.2231.00
317_W358_T1.2221.00
13_Q51_C1.2211.00
112_I115_R1.2191.00
82_D86_G1.2161.00
322_M348_L1.2081.00
350_A463_L1.2071.00
487_Q511_A1.1991.00
418_M446_A1.1961.00
500_A526_V1.1901.00
58_N74_E1.1891.00
491_Y502_I1.1881.00
342_K452_D1.1831.00
175_E179_N1.1801.00
16_P33_I1.1751.00
470_Y498_H1.1741.00
101_V185_I1.1711.00
380_Y407_W1.1661.00
17_R74_E1.1501.00
300_A303_R1.1501.00
107_E112_I1.1431.00
306_T310_D1.1421.00
525_L530_I1.1391.00
198_V276_F1.1371.00
461_K465_K1.1361.00
179_N182_Y1.1351.00
353_F464_I1.1311.00
530_I544_K1.1301.00
124_D174_N1.1301.00
189_L249_Y1.1191.00
116_S120_S1.1151.00
381_D386_K1.1141.00
473_F500_A1.1141.00
131_G151_Y1.1091.00
244_N248_R1.1071.00
345_A456_V1.1001.00
139_N212_D1.0931.00
114_S128_W1.0921.00
475_N495_N1.0911.00
514_R540_S1.0901.00
71_I81_F1.0871.00
55_D72_L1.0861.00
112_I116_S1.0851.00
354_L463_L1.0841.00
163_F203_H1.0831.00
101_V198_V1.0781.00
373_A407_W1.0771.00
172_W181_V1.0741.00
380_Y385_L1.0711.00
205_K233_G1.0651.00
239_T273_N1.0621.00
306_T480_L1.0581.00
117_S155_T1.0541.00
153_Q156_S1.0531.00
120_S123_R1.0461.00
254_V360_F1.0461.00
30_I53_L1.0411.00
131_G137_P1.0411.00
16_P50_I1.0391.00
50_I53_L1.0341.00
113_E117_S1.0251.00
34_R38_S1.0221.00
30_I71_I1.0181.00
96_I195_G1.0171.00
472_V495_N1.0171.00
336_D508_G1.0131.00
21_D26_G1.0121.00
201_I204_I1.0111.00
299_V486_Q1.0091.00
45_A93_M1.0021.00
99_L185_I0.9951.00
178_R237_L0.9891.00
205_K231_A0.9891.00
41_K93_M0.9841.00
16_P51_C0.9821.00
116_S154_K0.9801.00
297_D300_A0.9781.00
532_T544_K0.9771.00
132_K137_P0.9731.00
136_T147_P0.9721.00
205_K237_L0.9721.00
118_I157_Q0.9711.00
173_E237_L0.9691.00
470_Y500_A0.9681.00
78_M187_W0.9671.00
22_S31_Q0.9661.00
351_V506_L0.9641.00
36_K39_Y0.9621.00
252_M278_M0.9621.00
79_E83_E0.9601.00
131_G136_T0.9581.00
30_I81_F0.9571.00
164_D167_Q0.9561.00
472_V498_H0.9541.00
148_A160_L0.9501.00
125_W176_K0.9501.00
422_A425_Y0.9491.00
379_D432_K0.9481.00
207_K211_P0.9471.00
329_R332_S0.9471.00
528_S531_E0.9461.00
187_W191_K0.9461.00
200_A203_H0.9461.00
24_G431_A0.9381.00
471_D475_N0.9371.00
353_F359_P0.9371.00
239_T243_E0.9361.00
147_P150_E0.9351.00
58_N75_F0.9301.00
182_Y244_N0.9291.00
487_Q509_T0.9261.00
59_A106_D0.9251.00
85_L95_L0.9251.00
346_K456_V0.9241.00
41_K92_D0.9241.00
450_K461_K0.9231.00
485_D511_A0.9201.00
184_M187_W0.9181.00
47_V252_M0.9181.00
80_D83_E0.9171.00
45_A48_I0.9171.00
178_R182_Y0.9121.00
299_V303_R0.9111.00
507_T511_A0.9091.00
11_V360_F0.9081.00
335_G344_S0.9001.00
138_N142_S0.8991.00
262_A311_S0.8981.00
57_P66_R0.8971.00
113_E121_E0.8961.00
447_E451_N0.8941.00
525_L529_N0.8931.00
129_K210_F0.8911.00
17_R58_N0.8891.00
255_G276_F0.8881.00
422_A448_A0.8881.00
37_L87_D0.8851.00
201_I238_L0.8851.00
185_I245_T0.8851.00
530_I547_E0.8851.00
458_H462_S0.8841.00
23_N27_I0.8810.99
340_Y343_E0.8800.99
181_V184_M0.8790.99
39_Y446_A0.8790.99
84_L95_L0.8770.99
115_R154_K0.8710.99
182_Y241_L0.8700.99
138_N209_G0.8660.99
83_E86_G0.8650.99
34_R91_L0.8640.99
40_I93_M0.8640.99
480_L483_P0.8610.99
118_I155_T0.8610.99
244_N247_S0.8570.99
13_Q16_P0.8550.99
417_P420_W0.8540.99
446_A450_K0.8530.99
481_I501_L0.8500.99
142_S146_G0.8500.99
10_V45_A0.8480.99
78_M82_D0.8470.99
21_D25_D0.8460.99
88_I91_L0.8450.99
122_K176_K0.8440.99
30_I84_L0.8420.99
238_L241_L0.8410.99
151_Y155_T0.8410.99
114_S123_R0.8410.99
283_E307_D0.8400.99
137_P140_W0.8390.99
118_I130_D0.8380.99
97_M193_I0.8370.99
230_N264_E0.8360.99
207_K210_F0.8310.99
72_L75_F0.8300.99
114_S120_S0.8290.99
50_I81_F0.8250.99
297_D486_Q0.8240.99
245_T249_Y0.8240.99
385_L410_G0.8230.99
481_I492_L0.8220.99
124_D171_N0.8220.99
523_D528_S0.8210.99
367_L419_Q0.8210.99
22_S25_D0.8210.99
123_R157_Q0.8210.99
429_S433_P0.8150.99
419_Q437_I0.8130.99
503_A541_V0.8120.99
449_Q452_D0.8110.99
494_K497_S0.8110.99
30_I80_D0.8050.99
361_I460_Y0.8050.99
482_L485_D0.8040.99
385_L407_W0.8030.99
244_N249_Y0.8010.99
245_T248_R0.7950.99
116_S122_K0.7940.99
117_S123_R0.7940.99
478_Y489_F0.7890.99
38_S87_D0.7860.99
367_L449_Q0.7820.99
305_L355_M0.7810.99
329_R334_W0.7800.99
523_D526_V0.7780.99
352_Y359_P0.7770.99
164_D169_D0.7750.99
488_I513_F0.7750.99
313_E356_K0.7730.99
302_K306_T0.7730.99
20_K32_G0.7730.99
85_L193_I0.7720.99
4_A475_N0.7720.99
39_Y457_Y0.7720.99
459_F548_A0.7710.99
299_V302_K0.7710.99
203_H229_M0.7680.99
16_P30_I0.7670.99
5_W9_A0.7660.99
445_N448_A0.7660.99
322_M351_V0.7650.99
490_A501_L0.7620.99
443_W448_A0.7580.98
10_V353_F0.7570.98
372_V380_Y0.7560.98
199_D326_D0.7540.98
47_V94_K0.7530.98
86_G89_H0.7530.98
246_F253_T0.7530.98
243_E247_S0.7510.98
81_F84_L0.7500.98
278_M358_T0.7500.98
440_N444_L0.7490.98
295_S300_A0.7490.98
258_N327_Q0.7480.98
267_D270_G0.7480.98
165_K169_D0.7480.98
337_D340_Y0.7470.98
471_D498_H0.7470.98
419_Q426_A0.7470.98
137_P142_S0.7450.98
421_N425_Y0.7430.98
131_G135_K0.7390.98
270_G274_G0.7390.98
429_S432_K0.7390.98
269_A316_G0.7390.98
353_F463_L0.7350.98
354_L502_I0.7350.98
280_F360_F0.7350.98
101_V184_M0.7340.98
528_S547_E0.7320.98
163_F167_Q0.7300.98
202_T257_A0.7270.98
510_P544_K0.7260.98
110_W170_L0.7240.98
350_A354_L0.7210.98
38_S42_E0.7200.98
37_L48_I0.7200.98
523_D527_L0.7190.98
197_R326_D0.7170.98
120_S155_T0.7160.98
370_T444_L0.7130.98
94_K194_D0.7110.98
416_T419_Q0.7110.98
332_S335_G0.7100.98
471_D474_I0.7080.98
415_R419_Q0.7080.98
78_M81_F0.7070.98
331_V334_W0.7020.97
508_G546_Y0.7020.97
331_V335_G0.7000.97
526_V529_N0.7000.97
453_K458_H0.7000.97
124_D127_I0.6970.97
170_L177_V0.6960.97
264_E269_A0.6960.97
426_A437_I0.6950.97
179_N240_E0.6930.97
46_D93_M0.6930.97
189_L245_T0.6920.97
118_I123_R0.6920.97
167_Q171_N0.6920.97
495_N498_H0.6910.97
22_S84_L0.6890.97
95_L194_D0.6890.97
9_A94_K0.6890.97
11_V96_I0.6860.97
342_K456_V0.6860.97
525_L532_T0.6840.97
525_L531_E0.6840.97
235_M239_T0.6830.97
287_L304_I0.6830.97
171_N174_N0.6820.97
343_E530_I0.6820.97
169_D172_W0.6790.97
237_L241_L0.6790.97
142_S148_A0.6780.97
4_A8_E0.6780.97
102_N169_D0.6760.97
415_R418_M0.6760.97
349_S456_V0.6750.97
341_L449_Q0.6750.97
22_S33_I0.6740.97
466_L470_Y0.6730.97
179_N186_N0.6730.97
28_G32_G0.6720.97
343_E346_K0.6720.97
422_A445_N0.6710.97
448_A452_D0.6690.97
22_S35_T0.6680.97
336_D339_V0.6680.97
37_L93_M0.6640.96
115_R155_T0.6640.96
309_Q356_K0.6640.96
202_T258_N0.6640.96
524_A528_S0.6630.96
173_E205_K0.6630.96
270_G273_N0.6610.96
204_I234_I0.6590.96
280_F285_L0.6570.96
322_M330_S0.6550.96
373_A380_Y0.6540.96
137_P141_E0.6530.96
292_I295_S0.6530.96
100_V103_H0.6520.96
492_L495_N0.6510.96
421_N445_N0.6510.96
132_K136_T0.6490.96
58_N61_N0.6480.96
89_H94_K0.6460.96
164_D383_V0.6460.96
528_S532_T0.6460.96
350_A504_A0.6440.96
411_R415_R0.6440.96
31_Q77_T0.6440.96
186_N249_Y0.6430.96
322_M352_Y0.6430.96
342_K454_T0.6410.96
185_I198_V0.6410.96
380_Y410_G0.6390.96
365_Q460_Y0.6380.96
47_V96_I0.6360.95
164_D168_P0.6360.95
300_A304_I0.6360.95
436_G439_E0.6350.95
63_Y199_D0.6340.95
284_H301_F0.6330.95
478_Y481_I0.6320.95
85_L97_M0.6320.95
140_W144_F0.6310.95
4_A250_P0.6300.95
329_R335_G0.6290.95
283_E286_G0.6290.95
372_V375_P0.6280.95
29_D32_G0.6280.95
361_I464_I0.6270.95
128_W152_D0.6270.95
142_S145_G0.6270.95
114_S122_K0.6270.95
384_A388_L0.6250.95
523_D532_T0.6250.95
385_L388_L0.6230.95
39_Y45_A0.6220.95
425_Y432_K0.6220.95
514_R517_G0.6210.95
50_I84_L0.6200.95
524_A530_I0.6200.95
200_A204_I0.6200.95
294_E300_A0.6190.95
524_A532_T0.6160.95
339_V343_E0.6150.95
329_R333_V0.6150.95
63_Y326_D0.6140.95
240_E243_E0.6140.95
288_W409_K0.6120.94
199_D325_H0.6120.94
176_K180_A0.6120.94
108_H111_F0.6110.94
380_Y383_V0.6090.94
503_A543_L0.6080.94
421_N424_P0.6080.94
63_Y197_R0.6070.94
310_D479_E0.6070.94
21_D29_D0.6060.94
39_Y450_K0.6040.94
143_I229_M0.6030.94
166_K169_D0.6030.94
449_Q455_S0.6030.94
30_I33_I0.6020.94
186_N245_T0.6010.94
441_Y445_N0.6010.94
524_A529_N0.6000.94
34_R88_I0.5990.94
162_L203_H0.5990.94
480_L484_E0.5990.94
99_L198_V0.5980.94
415_R420_W0.5980.94
422_A426_A0.5980.94
186_N247_S0.5970.94
48_I93_M0.5970.94
138_N148_A0.5960.94
529_N532_T0.5960.94
363_Q418_M0.5960.94
66_R107_E0.5940.94
139_N142_S0.5940.94
354_L504_A0.5930.94
70_N79_E0.5930.94
25_D29_D0.5930.94
208_E211_P0.5920.93
528_S533_E0.5910.93
165_K171_N0.5900.93
524_A527_L0.5880.93
388_L407_W0.5880.93
177_V184_M0.5880.93
138_N141_E0.5870.93
269_A273_N0.5860.93
115_R118_I0.5860.93
197_R325_H0.5840.93
167_Q172_W0.5840.93
296_I300_A0.5840.93
440_N443_W0.5820.93
271_E274_G0.5810.93
305_L489_F0.5810.93
266_A315_I0.5790.93
353_F365_Q0.5790.93
114_S152_D0.5780.93
136_T140_W0.5740.92
65_I100_V0.5740.92
413_N417_P0.5730.92
202_T260_V0.5720.92
367_L456_V0.5710.92
527_L530_I0.5710.92
473_F476_G0.5710.92
477_T492_L0.5710.92
448_A451_N0.5700.92
255_G279_I0.5700.92
285_L321_F0.5700.92
23_N29_D0.5680.92
288_W291_E0.5680.92
177_V180_A0.5680.92
16_P75_F0.5680.92
20_K430_E0.5670.92
304_I307_D0.5660.92
57_P107_E0.5660.92
454_T458_H0.5660.92
410_G414_S0.5650.92
344_S546_Y0.5650.92
301_F305_L0.5640.92
380_Y409_K0.5640.92
385_L409_K0.5640.92
248_R251_I0.5640.92
138_N210_F0.5620.92
330_S365_Q0.5620.92
449_Q457_Y0.5620.92
181_V201_I0.5610.92
22_S29_D0.5610.92
478_Y491_Y0.5610.92
372_V407_W0.5600.91
140_W143_I0.5600.91
123_R126_Y0.5590.91
241_L248_R0.5590.91
182_Y186_N0.5590.91
237_L240_E0.5580.91
183_D186_N0.5580.91
138_N208_E0.5570.91
353_F361_I0.5570.91
330_S348_L0.5570.91
139_N143_I0.5570.91
426_A441_Y0.5570.91
349_S361_I0.5570.91
17_R75_F0.5560.91
230_N268_W0.5560.91
424_P429_S0.5560.91
121_E125_W0.5550.91
152_D157_Q0.5550.91
85_L194_D0.5550.91
198_V246_F0.5540.91
287_L296_I0.5530.91
234_I268_W0.5530.91
143_I203_H0.5530.91
85_L191_K0.5510.91
30_I50_I0.5500.91
508_G545_P0.5460.90
116_S152_D0.5460.90
128_W131_G0.5450.90
131_G158_Y0.5450.90
234_I238_L0.5440.90
116_S119_H0.5440.90
85_L89_H0.5440.90
173_E208_E0.5440.90
422_A442_K0.5440.90
481_I484_E0.5430.90
125_W128_W0.5430.90
42_E465_K0.5430.90
178_R205_K0.5430.90
42_E458_H0.5400.90
138_N211_P0.5400.90
240_E244_N0.5390.90
48_I84_L0.5390.90
454_T462_S0.5390.90
34_R80_D0.5380.90
127_I130_D0.5370.90
424_P430_E0.5370.90
137_P144_F0.5360.90
89_H95_L0.5340.89
10_V359_P0.5330.89
236_D239_T0.5330.89
71_I78_M0.5320.89
14_I51_C0.5320.89
414_S418_M0.5320.89
103_H325_H0.5320.89
304_I308_W0.5310.89
421_N441_Y0.5310.89
425_Y437_I0.5290.89
47_V93_M0.5280.89
138_N144_F0.5280.89
425_Y445_N0.5280.89
337_D341_L0.5270.89
124_D128_W0.5270.89
310_D313_E0.5270.89
480_L489_F0.5270.89
103_H197_R0.5260.89
307_D311_S0.5260.89
410_G413_N0.5260.89
543_L547_E0.5250.89
55_D75_F0.5250.89
242_K253_T0.5230.88
17_R72_L0.5230.88
303_R306_T0.5230.88
414_S417_P0.5230.88
199_D256_E0.5220.88
254_V280_F0.5220.88
11_V252_M0.5220.88
119_H122_K0.5210.88
296_I299_V0.5200.88
122_K180_A0.5200.88
347_A546_Y0.5190.88
167_Q170_L0.5190.88
466_L526_V0.5190.88
481_I490_A0.5180.88
345_A349_S0.5180.88
39_Y42_E0.5180.88
527_L532_T0.5170.88
321_F324_N0.5150.88
136_T139_N0.5150.88
282_F285_L0.5140.88
99_L184_M0.5130.87
162_L228_H0.5130.87
232_D236_D0.5120.87
63_Y325_H0.5120.87
197_R256_E0.5120.87
373_A439_E0.5110.87
285_L288_W0.5110.87
79_E191_K0.5100.87
117_S122_K0.5100.87
6_W9_A0.5100.87
423_G447_E0.5100.87
488_I511_A0.5090.87
538_M541_V0.5090.87
207_K231_A0.5090.87
234_I237_L0.5080.87
414_S420_W0.5080.87
242_K277_S0.5070.87
103_H199_D0.5070.87
266_A269_A0.5070.87
257_A260_V0.5070.87
9_A96_I0.5060.87
388_L409_K0.5060.87
257_A279_I0.5060.87
414_S419_Q0.5060.87
165_K168_P0.5050.87
63_Y256_E0.5050.87
281_Q286_G0.5050.87
426_A445_N0.5040.87
374_F442_K0.5040.87
330_S460_Y0.5020.86
11_V358_T0.5020.86
319_A360_F0.5020.86
279_I283_E0.5000.86
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2ze0A 2 0.9567 100 0.127 Contact Map
1uokA 1 0.9964 100 0.146 Contact Map
4mb1A 1 0.9856 100 0.156 Contact Map
4hphA 1 0.9928 100 0.168 Contact Map
4aieA 1 0.9585 100 0.17 Contact Map
2zicA 1 0.9531 100 0.171 Contact Map
3aj7A 1 0.9964 100 0.174 Contact Map
1zjaA 1 0.9928 100 0.175 Contact Map
3wy2A 1 0.9404 100 0.18 Contact Map
3zo9A 4 0.9043 100 0.213 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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