YWRK - BACSU - GREMLIN Contacts

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YWRK - Putative arsenical pump membrane protein

UniProt:	O05224	Sequences: MLAFFVTMIFIFWRPKGLNEAIPATFGALMVLLCGSVSLADLGEIGTKVTGASVTILATMIMAIALESFGFFYWVAAKLLQQSKGSGIKLFWLTNLLCFLMTIFLNNDGSILITTPILLLVLKYLGLKKHQKAPYLLSGVLIATASSAPIGVSNIVNLISLKIIGMDLYLHTAMMFVPSMMGLIFMTCLLFMFFYKRLPKSLPDIPGHFQSLRHRRYHPLHSPSAPLPERNQTKIMLFVLAFVFLVRMSLFAASYTGISVPLVAVIGSFILLSWRWIYFKTSPRDLLYKSPWHIFIFAFTMYVLIYGLHNIGFTELLVSYFEPVVSGSLAHATFASGISTSVFSNLFNNHPALMISTFTLTEMTLNPSTTKIIYLANIIGSDIGSLLLPMGTLATLIWMHILKQHDESISWGEYIKTTIIIIPLTVLFTLTCLYFWISWLFL	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	442 (398)
Sequences:	4799 (3157)
Seq/√Len:	158.3

ECOLI - ARSB YBIR YBHI TTDT CITT YFJV YFBS
BACSU - YWRK YDFA YFLS
HALSA - Q9HMC9
SULSO - Q980X8

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
86_S	89_K	3.772	1.00
237_L	241_A	3.723	1.00
78_K	82_Q	3.654	1.00
118_L	139_G	3.623	1.00
389_P	399_M	3.549	1.00
57_L	295_F	3.029	1.00
41_D	310_N	2.931	1.00
413_E	416_K	2.856	1.00
111_I	143_A	2.693	1.00
68_S	285_D	2.669	1.00
74_W	78_K	2.652	1.00
418_T	422_I	2.615	1.00
12_F	15_P	2.585	1.00
6_V	9_I	2.540	1.00
230_R	234_K	2.517	1.00
98_C	114_T	2.493	1.00
128_K	132_K	2.491	1.00
146_S	183_L	2.449	1.00
111_I	398_W	2.427	1.00
315_E	319_S	2.353	1.00
341_S	426_V	2.347	1.00
136_L	398_W	2.290	1.00
6_V	13_W	2.281	1.00
415_I	419_I	2.225	1.00
232_Q	236_M	2.203	1.00
159_I	357_T	2.169	1.00
431_T	435_F	2.141	1.00
4_F	8_M	2.128	1.00
7_T	14_R	2.122	1.00
167_D	170_L	2.107	1.00
119_L	407_E	2.106	1.00
151_G	161_L	2.102	1.00
233_T	236_M	2.090	1.00
345_N	387_L	2.077	1.00
10_F	14_R	2.045	1.00
376_A	380_G	2.022	1.00
7_T	11_I	2.014	1.00
147_S	154_N	2.013	1.00
39_L	43_G	1.990	1.00
235_I	239_V	1.978	1.00
247_R	251_F	1.966	1.00
338_I	430_L	1.959	1.00
7_T	15_P	1.940	1.00
271_L	275_R	1.933	1.00
96_L	183_L	1.916	1.00
83_S	93_L	1.912	1.00
170_L	173_A	1.902	1.00
8_M	15_P	1.879	1.00
10_F	13_W	1.857	1.00
6_V	10_F	1.846	1.00
181_M	432_C	1.840	1.00
221_H	225_A	1.828	1.00
419_I	422_I	1.824	1.00
10_F	16_K	1.808	1.00
38_S	41_D	1.772	1.00
88_I	191_F	1.769	1.00
40_A	44_E	1.769	1.00
238_F	242_F	1.755	1.00
237_L	240_L	1.733	1.00
9_I	13_W	1.732	1.00
238_F	241_A	1.729	1.00
236_M	239_V	1.702	1.00
169_Y	173_A	1.698	1.00
234_K	237_L	1.687	1.00
260_V	263_V	1.686	1.00
123_K	405_H	1.685	1.00
284_R	288_Y	1.620	1.00
246_V	250_L	1.606	1.00
128_K	197_R	1.599	1.00
39_L	42_L	1.597	1.00
4_F	13_W	1.597	1.00
115_T	136_L	1.591	1.00
267_G	271_L	1.587	1.00
316_L	319_S	1.583	1.00
334_F	430_L	1.571	1.00
231_N	234_K	1.565	1.00
4_F	12_F	1.563	1.00
30_M	34_C	1.561	1.00
7_T	13_W	1.544	1.00
395_T	398_W	1.527	1.00
10_F	15_P	1.524	1.00
173_A	177_V	1.521	1.00
342_V	346_L	1.518	1.00
12_F	16_K	1.511	1.00
11_I	15_P	1.502	1.00
194_F	417_T	1.498	1.00
42_L	45_I	1.498	1.00
106_N	109_G	1.491	1.00
58_A	268_S	1.486	1.00
188_C	192_M	1.480	1.00
6_V	12_F	1.468	1.00
32_L	35_G	1.465	1.00
185_F	428_F	1.449	1.00
148_A	179_S	1.444	1.00
4_F	14_R	1.440	1.00
100_L	104_F	1.433	1.00
11_I	14_R	1.421	1.00
74_W	77_A	1.416	1.00
403_K	408_S	1.405	1.00
40_A	43_G	1.402	1.00
8_M	13_W	1.395	1.00
133_A	413_E	1.392	1.00
233_T	237_L	1.387	1.00
339_S	343_F	1.387	1.00
61_I	287_L	1.381	1.00
45_I	306_Y	1.380	1.00
92_W	191_F	1.378	1.00
8_M	12_F	1.372	1.00
270_I	274_W	1.372	1.00
68_S	289_K	1.365	1.00
340_T	381_S	1.355	1.00
24_A	33_L	1.352	1.00
6_V	14_R	1.348	1.00
78_K	81_Q	1.344	1.00
264_A	271_L	1.344	1.00
427_L	431_T	1.330	1.00
330_A	434_Y	1.329	1.00
234_K	238_F	1.325	1.00
228_P	231_N	1.315	1.00
95_N	138_S	1.300	1.00
338_I	342_V	1.295	1.00
182_G	425_T	1.293	1.00
227_L	231_N	1.292	1.00
224_S	230_R	1.289	1.00
92_W	187_T	1.288	1.00
234_K	241_A	1.280	1.00
231_N	235_I	1.262	1.00
31_V	35_G	1.256	1.00
134_P	190_L	1.254	1.00
410_S	413_E	1.251	1.00
422_I	426_V	1.248	1.00
232_Q	235_I	1.245	1.00
6_V	11_I	1.245	1.00
412_G	416_K	1.244	1.00
376_A	433_L	1.244	1.00
137_L	141_L	1.243	1.00
176_F	180_M	1.240	1.00
140_V	398_W	1.237	1.00
77_A	81_Q	1.235	1.00
13_W	16_K	1.235	1.00
29_L	33_L	1.234	1.00
228_P	234_K	1.230	1.00
5_F	14_R	1.230	1.00
66_L	71_F	1.228	1.00
189_L	424_L	1.221	1.00
7_T	16_K	1.220	1.00
57_L	61_I	1.215	1.00
396_L	399_M	1.213	1.00
316_L	320_Y	1.213	1.00
325_V	332_A	1.209	1.00
32_L	37_V	1.208	1.00
228_P	232_Q	1.203	1.00
96_L	100_L	1.202	1.00
414_Y	418_T	1.201	1.00
84_K	89_K	1.201	1.00
41_D	44_E	1.200	1.00
232_Q	239_V	1.196	1.00
389_P	396_L	1.187	1.00
285_D	288_Y	1.186	1.00
353_L	381_S	1.183	1.00
142_I	183_L	1.174	1.00
115_T	398_W	1.170	1.00
6_V	15_P	1.170	1.00
298_A	385_S	1.169	1.00
94_T	118_L	1.166	1.00
4_F	15_P	1.165	1.00
67_E	289_K	1.156	1.00
21_A	24_A	1.154	1.00
9_I	14_R	1.154	1.00
9_I	16_K	1.149	1.00
242_F	246_V	1.149	1.00
192_M	195_Y	1.140	1.00
241_A	248_M	1.132	1.00
340_T	377_N	1.131	1.00
229_E	232_Q	1.118	1.00
188_C	191_F	1.116	1.00
73_Y	77_A	1.110	1.00
150_I	153_S	1.110	1.00
261_P	275_R	1.109	1.00
122_L	135_Y	1.104	1.00
156_V	382_D	1.097	0.99
4_F	7_T	1.093	0.99
171_H	175_M	1.093	0.99
252_A	255_Y	1.088	0.99
246_V	267_G	1.084	0.99
108_D	147_S	1.077	0.99
272_L	276_W	1.076	0.99
9_I	15_P	1.070	0.99
191_F	195_Y	1.069	0.99
418_T	421_I	1.068	0.99
32_L	36_S	1.067	0.99
239_V	242_F	1.067	0.99
168_L	172_T	1.063	0.99
236_M	240_L	1.059	0.99
5_F	15_P	1.054	0.99
268_S	272_L	1.052	0.99
192_M	196_K	1.044	0.99
419_I	423_P	1.042	0.99
341_S	422_I	1.037	0.99
155_I	302_Y	1.036	0.99
39_L	45_I	1.034	0.99
181_M	428_F	1.031	0.99
20_E	348_N	1.029	0.99
268_S	271_L	1.029	0.99
177_V	432_C	1.015	0.99
344_S	381_S	1.014	0.99
146_S	298_A	1.012	0.99
320_Y	324_V	1.010	0.99
248_M	251_F	1.001	0.99
12_F	23_P	1.001	0.99
48_K	53_S	1.001	0.99
9_I	12_F	0.995	0.99
24_A	27_G	0.993	0.99
27_G	32_L	0.992	0.99
82_Q	85_G	0.990	0.99
410_S	416_K	0.981	0.99
260_V	268_S	0.971	0.99
41_D	45_I	0.969	0.99
247_R	250_L	0.968	0.99
236_M	242_F	0.968	0.99
172_T	176_F	0.967	0.99
249_S	253_A	0.967	0.99
247_R	253_A	0.966	0.99
320_Y	323_P	0.966	0.99
23_P	26_F	0.961	0.99
270_I	275_R	0.961	0.99
38_S	42_L	0.960	0.99
306_Y	310_N	0.960	0.99
329_L	333_T	0.956	0.99
178_P	379_I	0.955	0.99
81_Q	223_P	0.954	0.99
8_M	16_K	0.953	0.99
108_D	154_N	0.947	0.99
97_L	143_A	0.944	0.98
248_M	252_A	0.942	0.98
229_E	233_T	0.941	0.98
136_L	402_L	0.940	0.98
156_V	350_H	0.939	0.98
62_M	246_V	0.938	0.98
109_G	297_F	0.937	0.98
312_G	315_E	0.937	0.98
148_A	175_M	0.935	0.98
261_P	271_L	0.935	0.98
260_V	264_A	0.933	0.98
23_P	27_G	0.932	0.98
260_V	271_L	0.932	0.98
11_I	16_K	0.926	0.98
8_M	14_R	0.925	0.98
230_R	233_T	0.917	0.98
225_A	229_E	0.914	0.98
418_T	429_T	0.914	0.98
221_H	224_S	0.913	0.98
184_I	188_C	0.913	0.98
127_L	135_Y	0.911	0.98
411_W	418_T	0.908	0.98
264_A	267_G	0.907	0.98
106_N	147_S	0.906	0.98
251_F	255_Y	0.906	0.98
19_N	23_P	0.904	0.98
387_L	422_I	0.903	0.98
5_F	30_M	0.902	0.98
220_L	223_P	0.899	0.98
149_P	179_S	0.897	0.98
398_W	402_L	0.896	0.98
25_T	33_L	0.895	0.98
305_I	394_A	0.890	0.98
28_A	300_T	0.889	0.98
154_N	157_N	0.887	0.98
26_F	30_M	0.887	0.98
146_S	153_S	0.878	0.98
415_I	418_T	0.875	0.98
21_A	25_T	0.873	0.97
170_L	174_M	0.871	0.97
178_P	182_G	0.867	0.97
7_T	12_F	0.867	0.97
70_G	73_Y	0.867	0.97
97_L	101_M	0.867	0.97
26_F	269_F	0.864	0.97
345_N	348_N	0.861	0.97
51_G	162_K	0.861	0.97
102_T	350_H	0.861	0.97
250_L	253_A	0.860	0.97
79_L	82_Q	0.860	0.97
200_K	203_P	0.858	0.97
49_V	52_A	0.854	0.97
352_A	356_S	0.846	0.97
159_I	350_H	0.845	0.97
5_F	13_W	0.844	0.97
175_M	179_S	0.841	0.97
102_T	107_N	0.838	0.97
4_F	177_V	0.837	0.97
378_I	381_S	0.837	0.97
235_I	238_F	0.837	0.97
261_P	264_A	0.836	0.97
25_T	29_L	0.836	0.97
137_L	417_T	0.834	0.97
51_G	261_P	0.833	0.97
128_K	133_A	0.832	0.97
79_L	83_S	0.830	0.97
98_C	139_G	0.827	0.96
361_T	364_T	0.824	0.96
415_I	422_I	0.824	0.96
269_F	273_S	0.819	0.96
180_M	184_I	0.819	0.96
29_L	32_L	0.816	0.96
159_I	354_M	0.816	0.96
24_A	32_L	0.814	0.96
73_Y	124_Y	0.809	0.96
336_S	377_N	0.808	0.96
64_I	286_L	0.807	0.96
24_A	29_L	0.807	0.96
93_L	97_L	0.806	0.96
382_D	385_S	0.805	0.96
70_G	74_W	0.804	0.96
30_M	33_L	0.800	0.96
337_G	430_L	0.799	0.96
24_A	31_V	0.798	0.96
31_V	307_G	0.797	0.96
4_F	16_K	0.797	0.96
387_L	419_I	0.796	0.96
225_A	228_P	0.792	0.96
386_L	395_T	0.790	0.95
340_T	356_S	0.779	0.95
55_T	59_T	0.778	0.95
416_K	419_I	0.776	0.95
141_L	145_A	0.776	0.95
22_I	26_F	0.770	0.95
254_S	257_G	0.769	0.95
153_S	395_T	0.769	0.95
298_A	349_N	0.764	0.95
160_S	378_I	0.760	0.94
79_L	85_G	0.759	0.94
256_T	259_S	0.755	0.94
261_P	268_S	0.755	0.94
350_H	353_L	0.755	0.94
420_I	423_P	0.754	0.94
34_C	37_V	0.752	0.94
307_G	311_I	0.749	0.94
348_N	385_S	0.741	0.94
59_T	109_G	0.740	0.94
340_T	380_G	0.739	0.94
37_V	42_L	0.738	0.93
385_S	395_T	0.736	0.93
141_L	421_I	0.735	0.93
333_T	376_A	0.734	0.93
6_V	16_K	0.733	0.93
372_I	434_Y	0.733	0.93
272_L	275_R	0.729	0.93
423_P	427_L	0.728	0.93
220_L	224_S	0.728	0.93
308_L	311_I	0.726	0.93
28_A	303_V	0.723	0.93
175_M	178_P	0.723	0.93
153_S	350_H	0.721	0.93
422_I	425_T	0.717	0.92
185_F	189_L	0.717	0.92
392_T	395_T	0.716	0.92
33_L	36_S	0.712	0.92
408_S	412_G	0.706	0.92
155_I	160_S	0.706	0.92
102_T	146_S	0.705	0.92
416_K	420_I	0.705	0.92
63_A	150_I	0.696	0.91
233_T	240_L	0.696	0.91
5_F	12_F	0.693	0.91
170_L	371_K	0.693	0.91
330_A	431_T	0.692	0.91
23_P	33_L	0.691	0.91
68_S	71_F	0.691	0.91
352_A	355_I	0.690	0.91
156_V	345_N	0.686	0.91
61_I	268_S	0.686	0.91
349_N	385_S	0.686	0.91
250_L	271_L	0.685	0.91
259_S	262_L	0.684	0.91
52_A	352_A	0.680	0.90
27_G	37_V	0.680	0.90
64_I	67_E	0.679	0.90
298_A	350_H	0.678	0.90
250_L	267_G	0.674	0.90
259_S	263_V	0.674	0.90
99_F	386_L	0.674	0.90
97_L	114_T	0.671	0.90
9_I	304_L	0.671	0.90
382_D	392_T	0.670	0.90
285_D	289_K	0.670	0.90
350_H	393_L	0.668	0.90
27_G	31_V	0.665	0.89
67_E	73_Y	0.665	0.89
144_T	394_A	0.665	0.89
343_F	352_A	0.664	0.89
4_F	252_A	0.664	0.89
260_V	275_R	0.664	0.89
172_T	175_M	0.663	0.89
107_N	155_I	0.662	0.89
227_L	230_R	0.661	0.89
157_N	351_P	0.660	0.89
319_S	323_P	0.658	0.89
378_I	395_T	0.658	0.89
115_T	401_I	0.657	0.89
19_N	22_I	0.657	0.89
107_N	351_P	0.657	0.89
382_D	395_T	0.656	0.89
20_E	23_P	0.656	0.89
172_T	179_S	0.654	0.89
270_I	273_S	0.652	0.88
143_A	394_A	0.651	0.88
148_A	382_D	0.651	0.88
190_L	417_T	0.650	0.88
101_M	110_S	0.647	0.88
349_N	382_D	0.647	0.88
48_K	299_F	0.646	0.88
155_I	385_S	0.644	0.88
24_A	28_A	0.643	0.88
247_R	255_Y	0.641	0.88
227_L	233_T	0.640	0.88
175_M	378_I	0.639	0.87
380_G	384_G	0.639	0.87
4_F	10_F	0.639	0.87
153_S	385_S	0.638	0.87
179_S	183_L	0.638	0.87
154_N	351_P	0.636	0.87
107_N	394_A	0.636	0.87
195_Y	198_L	0.635	0.87
161_L	168_L	0.635	0.87
59_T	106_N	0.635	0.87
261_P	272_L	0.634	0.87
246_V	249_S	0.633	0.87
108_D	157_N	0.632	0.87
107_N	154_N	0.632	0.87
309_H	312_G	0.631	0.87
383_I	425_T	0.630	0.87
9_I	23_P	0.629	0.87
265_V	269_F	0.629	0.87
107_N	349_N	0.629	0.87
59_T	264_A	0.626	0.86
118_L	122_L	0.624	0.86
145_A	148_A	0.623	0.86
232_Q	241_A	0.622	0.86
315_E	322_E	0.621	0.86
58_A	264_A	0.621	0.86
57_L	292_W	0.620	0.86
353_L	357_T	0.618	0.86
379_I	429_T	0.616	0.85
52_A	60_M	0.616	0.85
8_M	11_I	0.614	0.85
302_Y	354_M	0.614	0.85
77_A	124_Y	0.611	0.85
108_D	116_P	0.611	0.85
58_A	62_M	0.609	0.85
147_S	352_A	0.608	0.85
4_F	11_I	0.608	0.85
76_A	79_L	0.606	0.85
140_V	418_T	0.604	0.84
79_L	93_L	0.604	0.84
158_L	380_G	0.603	0.84
199_P	202_L	0.602	0.84
122_L	132_K	0.602	0.84
431_T	434_Y	0.602	0.84
391_G	396_L	0.601	0.84
234_K	242_F	0.600	0.84
178_P	181_M	0.600	0.84
354_M	393_L	0.600	0.84
321_F	335_A	0.598	0.84
274_W	286_L	0.598	0.84
232_Q	242_F	0.597	0.84
282_S	286_L	0.597	0.84
102_T	110_S	0.597	0.84
412_G	415_I	0.597	0.84
260_V	276_W	0.596	0.84
107_N	144_T	0.595	0.83
315_E	362_E	0.595	0.83
186_M	190_L	0.595	0.83
348_N	355_I	0.595	0.83
342_V	435_F	0.593	0.83
342_V	423_P	0.591	0.83
156_V	397_I	0.591	0.83
62_M	271_L	0.588	0.83
5_F	10_F	0.587	0.83
107_N	392_T	0.585	0.82
39_L	262_L	0.584	0.82
6_V	308_L	0.583	0.82
242_F	319_S	0.583	0.82
144_T	392_T	0.582	0.82
191_F	196_K	0.581	0.82
108_D	393_L	0.580	0.82
163_I	357_T	0.579	0.82
106_N	348_N	0.579	0.82
108_D	397_I	0.578	0.82
347_F	352_A	0.578	0.82
59_T	63_A	0.577	0.82
425_T	429_T	0.576	0.81
150_I	177_V	0.575	0.81
187_T	191_F	0.571	0.81
153_S	302_Y	0.571	0.81
133_A	137_L	0.570	0.81
55_T	151_G	0.569	0.81
52_A	62_M	0.568	0.81
81_Q	85_G	0.568	0.81
79_L	84_K	0.566	0.80
148_A	383_I	0.566	0.80
57_L	290_S	0.562	0.80
360_L	363_M	0.562	0.80
67_E	120_L	0.561	0.80
411_W	422_I	0.561	0.80
29_L	37_V	0.561	0.80
391_G	414_Y	0.560	0.80
185_F	424_L	0.560	0.80
7_T	221_H	0.557	0.79
109_G	386_L	0.557	0.79
297_F	301_M	0.557	0.79
348_N	351_P	0.557	0.79
53_S	299_F	0.557	0.79
324_V	335_A	0.556	0.79
235_I	240_L	0.555	0.79
132_K	407_E	0.554	0.79
321_F	373_I	0.553	0.79
422_I	429_T	0.553	0.79
95_N	142_I	0.553	0.79
410_S	414_Y	0.553	0.79
54_V	58_A	0.552	0.79
53_S	57_L	0.552	0.79
108_D	115_T	0.551	0.79
235_I	242_F	0.550	0.78
156_V	348_N	0.549	0.78
233_T	242_F	0.549	0.78
265_V	275_R	0.549	0.78
399_M	403_K	0.549	0.78
5_F	16_K	0.547	0.78
16_K	20_E	0.547	0.78
410_S	422_I	0.546	0.78
233_T	239_V	0.546	0.78
102_T	156_V	0.546	0.78
389_P	415_I	0.545	0.78
147_S	156_V	0.545	0.78
152_V	168_L	0.545	0.78
251_F	254_S	0.543	0.78
430_L	434_Y	0.543	0.78
395_T	399_M	0.542	0.77
387_L	391_G	0.539	0.77
5_F	34_C	0.538	0.77
260_V	270_I	0.535	0.77
235_I	274_W	0.535	0.77
59_T	140_V	0.533	0.76
76_A	83_S	0.533	0.76
108_D	156_V	0.531	0.76
11_I	329_L	0.531	0.76
95_N	190_L	0.531	0.76
60_M	291_P	0.530	0.76
111_I	114_T	0.529	0.76
356_S	392_T	0.529	0.76
385_S	390_M	0.527	0.75
74_W	81_Q	0.527	0.75
224_S	228_P	0.526	0.75
99_F	141_L	0.525	0.75
91_F	135_Y	0.524	0.75
284_R	287_L	0.523	0.75
171_H	375_L	0.523	0.75
65_A	286_L	0.522	0.75
140_V	391_G	0.522	0.75
391_G	395_T	0.522	0.75
113_I	343_F	0.521	0.75
40_A	45_I	0.521	0.75
194_F	197_R	0.521	0.75
9_I	27_G	0.521	0.75
269_F	274_W	0.520	0.75
293_H	396_L	0.519	0.74
114_T	388_L	0.518	0.74
160_S	298_A	0.517	0.74
317_L	320_Y	0.517	0.74
322_E	346_L	0.517	0.74
19_N	293_H	0.516	0.74
344_S	348_N	0.515	0.74
336_S	358_F	0.514	0.74
69_F	72_F	0.513	0.74
118_L	135_Y	0.513	0.74
321_F	339_S	0.512	0.73
355_I	373_I	0.512	0.73
87_G	198_L	0.512	0.73
350_H	395_T	0.511	0.73
344_S	353_L	0.510	0.73
87_G	134_P	0.510	0.73
234_K	240_L	0.508	0.73
177_V	181_M	0.507	0.73
175_M	375_L	0.507	0.73
219_P	226_P	0.507	0.73
260_V	265_V	0.506	0.73
106_N	110_S	0.506	0.73
147_S	348_N	0.505	0.72
199_P	435_F	0.505	0.72
189_L	193_F	0.505	0.72
231_N	237_L	0.504	0.72
26_F	29_L	0.503	0.72
142_I	146_S	0.502	0.72
105_L	136_L	0.500	0.72
319_S	322_E	0.500	0.72
384_G	392_T	0.500	0.72

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4f35D	2	0.8959	100	0.439	Contact Map
4r1iA	2	0.9502	99.9	0.703	Contact Map
4r0cA	3	0.9389	99.9	0.723	Contact Map
3tdsE	3	0.509	36.5	0.957	Contact Map
3kcuA	3	0.4593	32.9	0.958	Contact Map
1j4nA	4	0.4118	26.3	0.96	Contact Map
3klyA	3	0.4729	22.4	0.961	Contact Map
2b6oA	6	0.414	22.4	0.961	Contact Map
3d9sA	3	0.4208	21.1	0.962	Contact Map
4oj2X	3	0.4367	18.1	0.963	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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