YTCI - BACSU - GREMLIN Contacts

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YTCI - Uncharacterized acyl--CoA ligase YtcI

UniProt:	C0SPB0	Sequences: MLKREDLIAPVQYNLVNEMEKFSAAGQKTALLWEDESGKQESWSYEKLMEETNKIGAALADLGFKKGDKLIVMVPRVLEAYAVYLAILKSGMVVIPCSEMLRAKDLEYRIEHAEVKGAIVYSEFIGAFRDVSTADKLITLSIGENDAGWKNLLSIEADGSQFKTADTTRDDMAFLSYTSGTTGQPKGVVHTHGWAFAHLKTSAGAWLDISEKDIVWATAAPGWQKWVWSPFLAVLGSGATGFVYHGRFKAEKYLELLNRYKINVFCCTPTEYRLMAKVEGLKRFDLSALHSAVSAGEPLNREVIDVFQKHFGIKVRDGYGQTESTLLVGVLKDTPIKPGSMGKPTPGNQVEIINEDGEICKPGEVGDIAVHLSTPALFKEYFKDPERMKTQIRGDYFLTGDRARKDEEGYFWFESRNDDIIISSGYTIGPFEVEDALVKHPEVKECAVVASPDEIRGSIVKAYVVLQNHEKRSDELVKMLQNHVKTITAPYKYPREIEFVESLPKTASAKIRRVELRKREEQLKANKKA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	529 (481)
Sequences:	71824 (51564)
Seq/√Len:	2351.1

ECOLI - ACSA ENTF LCFA PRPE AAS ENTE FADK CAIC MENE PAAK
BACSU - YTCI ACSA SRFAC LCFA PPSE LCFB YNGI DHBE YDAB MENE DLTA YHFT PPSB PPSC DHBF PKSJ
HALSA - Q9HRY8 Q9HQU8 Q9HSM3 Q9HNK0 Q9HQ43 Q9HQN8
SULSO - Q97UX8 Q97YK9 Q97WQ0 Q97U22 Q97VT6 Q97UW7 Q97WQ9 Q97VU7 Q97XW4 Q97WK0 Q97V27 Q97UF6 Q97WS5 Q980E4 Q97X52 Q97XW5 Q97VJ6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
172_M	189_V	3.857	1.00
440_H	483_H	3.161	1.00
368_I	403_A	3.045	1.00
53_N	89_K	2.922	1.00
384_D	387_R	2.870	1.00
112_H	177_Y	2.815	1.00
71_I	115_V	2.753	1.00
191_T	379_K	2.745	1.00
68_D	116_K	2.720	1.00
404_R	412_W	2.719	1.00
49_M	89_K	2.707	1.00
349_Q	373_S	2.678	1.00
64_F	92_M	2.670	1.00
32_L	240_T	2.607	1.00
367_D	398_L	2.476	1.00
214_I	240_T	2.423	1.00
29_T	42_S	2.395	1.00
422_I	427_T	2.388	1.00
114_E	383_K	2.370	1.00
445_E	505_K	2.367	1.00
438_V	446_C	2.313	1.00
25_A	28_K	2.303	1.00
69_K	95_I	2.292	1.00
58_A	62_L	2.276	1.00
353_I	369_A	2.235	1.00
51_E	82_A	2.219	1.00
351_E	359_I	2.214	1.00
437_L	462_A	2.191	1.00
365_V	402_R	2.171	1.00
354_N	358_E	2.147	1.00
369_A	398_L	2.144	1.00
108_Y	184_Q	2.141	1.00
83_V	119_I	2.132	1.00
112_H	384_D	2.118	1.00
21_K	25_A	2.095	1.00
512_R	515_E	2.070	1.00
406_D	412_W	2.066	1.00
49_M	53_N	2.064	1.00
255_E	259_R	2.053	1.00
33_W	78_L	2.036	1.00
387_R	390_T	2.035	1.00
419_D	513_R	2.033	1.00
213_D	290_H	2.026	1.00
461_K	498_E	2.003	1.00
168_T	171_D	2.003	1.00
87_I	92_M	1.996	1.00
439_K	487_I	1.982	1.00
340_S	412_W	1.949	1.00
406_D	410_Y	1.928	1.00
404_R	414_E	1.915	1.00
55_I	82_A	1.907	1.00
385_P	389_K	1.893	1.00
213_D	263_N	1.884	1.00
32_L	42_S	1.861	1.00
301_R	305_D	1.854	1.00
27_Q	46_E	1.841	1.00
66_K	171_D	1.837	1.00
107_E	111_E	1.831	1.00
351_E	369_A	1.829	1.00
65_K	68_D	1.804	1.00
60_A	90_S	1.772	1.00
432_E	492_K	1.769	1.00
116_K	135_D	1.761	1.00
515_E	518_K	1.747	1.00
52_T	89_K	1.738	1.00
405_K	411_F	1.737	1.00
32_L	260_Y	1.728	1.00
67_G	171_D	1.726	1.00
20_E	24_A	1.696	1.00
423_S	428_I	1.694	1.00
46_E	50_E	1.684	1.00
365_V	414_E	1.676	1.00
438_V	445_E	1.674	1.00
434_E	448_V	1.672	1.00
261_K	288_A	1.671	1.00
444_K	467_Q	1.659	1.00
242_F	262_I	1.651	1.00
75_P	121_Y	1.640	1.00
44_S	47_K	1.619	1.00
191_T	194_W	1.615	1.00
449_V	463_Y	1.593	1.00
21_K	24_A	1.589	1.00
362_P	405_K	1.584	1.00
172_M	379_K	1.568	1.00
71_I	97_C	1.561	1.00
62_L	136_K	1.559	1.00
88_L	173_A	1.553	1.00
69_K	93_V	1.536	1.00
464_V	499_F	1.534	1.00
386_E	390_T	1.530	1.00
465_V	503_L	1.527	1.00
463_Y	516_L	1.523	1.00
43_W	82_A	1.521	1.00
448_V	462_A	1.520	1.00
314_K	332_K	1.519	1.00
442_E	479_M	1.518	1.00
267_C	272_Y	1.502	1.00
252_K	255_E	1.501	1.00
466_L	499_F	1.497	1.00
352_I	403_A	1.496	1.00
328_V	370_V	1.488	1.00
26_G	46_E	1.485	1.00
483_H	487_I	1.484	1.00
177_Y	187_G	1.478	1.00
28_K	212_K	1.477	1.00
234_V	239_A	1.474	1.00
436_A	487_I	1.469	1.00
53_N	57_A	1.467	1.00
70_L	87_I	1.455	1.00
29_T	32_L	1.452	1.00
170_D	193_G	1.445	1.00
481_Q	497_I	1.436	1.00
113_A	177_Y	1.434	1.00
22_F	49_M	1.426	1.00
337_K	408_E	1.425	1.00
29_T	240_T	1.421	1.00
361_K	364_E	1.420	1.00
321_Q	397_F	1.417	1.00
175_L	382_F	1.415	1.00
258_N	284_F	1.412	1.00
305_D	309_K	1.411	1.00
216_W	262_I	1.404	1.00
452_P	458_S	1.400	1.00
138_I	142_I	1.396	1.00
270_T	297_E	1.391	1.00
403_A	413_F	1.391	1.00
506_T	512_R	1.389	1.00
43_W	78_L	1.384	1.00
189_V	382_F	1.384	1.00
210_S	213_D	1.384	1.00
194_W	325_T	1.378	1.00
478_K	482_N	1.377	1.00
110_I	115_V	1.372	1.00
189_V	380_E	1.364	1.00
442_E	470_E	1.360	1.00
205_A	346_P	1.357	1.00
249_K	252_K	1.351	1.00
213_D	264_V	1.350	1.00
365_V	404_R	1.348	1.00
30_A	48_L	1.348	1.00
378_F	392_I	1.344	1.00
402_R	417_N	1.344	1.00
214_I	242_F	1.342	1.00
33_W	41_E	1.341	1.00
329_G	350_V	1.340	1.00
464_V	497_I	1.338	1.00
272_Y	292_A	1.335	1.00
256_L	260_Y	1.333	1.00
70_L	92_M	1.330	1.00
71_I	110_I	1.329	1.00
95_I	113_A	1.327	1.00
393_R	398_L	1.324	1.00
350_V	370_V	1.322	1.00
354_N	360_C	1.314	1.00
391_Q	397_F	1.306	1.00
343_K	410_Y	1.305	1.00
337_K	410_Y	1.303	1.00
169_R	193_G	1.296	1.00
463_Y	500_V	1.291	1.00
69_K	175_L	1.282	1.00
244_Y	256_L	1.277	1.00
112_H	383_K	1.277	1.00
482_N	486_T	1.271	1.00
445_E	465_V	1.270	1.00
461_K	496_E	1.262	1.00
453_D	459_I	1.261	1.00
67_G	379_K	1.258	1.00
294_S	299_L	1.257	1.00
421_I	430_P	1.255	1.00
193_G	375_P	1.246	1.00
85_L	235_L	1.245	1.00
373_S	396_Y	1.244	1.00
64_F	68_D	1.243	1.00
351_E	396_Y	1.238	1.00
55_I	86_A	1.238	1.00
485_K	493_Y	1.232	1.00
108_Y	112_H	1.231	1.00
112_H	184_Q	1.230	1.00
69_K	382_F	1.226	1.00
344_P	350_V	1.226	1.00
93_V	172_M	1.225	1.00
49_M	162_F	1.221	1.00
451_S	461_K	1.221	1.00
122_S	141_S	1.220	1.00
103_A	127_A	1.220	1.00
265_F	289_L	1.209	1.00
64_F	70_L	1.208	1.00
72_V	83_V	1.203	1.00
189_V	379_K	1.199	1.00
431_F	435_D	1.198	1.00
51_E	54_K	1.197	1.00
214_I	262_I	1.193	1.00
103_A	107_E	1.188	1.00
367_D	417_N	1.183	1.00
331_L	410_Y	1.179	1.00
355_E	417_N	1.171	1.00
204_G	237_S	1.171	1.00
419_D	431_F	1.165	1.00
485_K	490_P	1.161	1.00
42_S	260_Y	1.160	1.00
50_E	54_K	1.160	1.00
459_I	495_R	1.159	1.00
175_L	187_G	1.151	1.00
360_C	364_E	1.150	1.00
264_V	291_S	1.149	1.00
368_I	413_F	1.147	1.00
225_K	266_C	1.145	1.00
103_A	130_D	1.142	1.00
30_A	45_Y	1.142	1.00
459_I	496_E	1.138	1.00
48_L	85_L	1.136	1.00
483_H	486_T	1.136	1.00
167_T	171_D	1.135	1.00
257_L	288_A	1.133	1.00
426_Y	491_Y	1.133	1.00
41_E	78_L	1.126	1.00
277_K	306_V	1.117	1.00
450_A	458_S	1.117	1.00
86_A	90_S	1.111	1.00
111_E	184_Q	1.108	1.00
481_Q	485_K	1.103	1.00
43_W	51_E	1.103	1.00
463_Y	517_R	1.101	1.00
273_R	303_V	1.100	1.00
462_A	497_I	1.095	1.00
251_E	278_V	1.091	1.00
178_T	188_V	1.085	1.00
73_M	106_L	1.085	1.00
61_D	158_D	1.085	1.00
34_E	41_E	1.081	1.00
276_A	306_V	1.074	1.00
170_D	191_T	1.073	1.00
47_K	50_E	1.071	1.00
190_H	194_W	1.071	1.00
58_A	61_D	1.069	1.00
51_E	79_E	1.067	1.00
387_R	391_Q	1.065	1.00
307_F	311_F	1.065	1.00
56_G	89_K	1.064	1.00
484_V	493_Y	1.064	1.00
117_G	136_K	1.063	1.00
80_A	221_P	1.062	1.00
348_N	376_A	1.059	1.00
369_A	396_Y	1.055	1.00
424_S	456_R	1.054	1.00
48_L	82_A	1.052	1.00
32_L	242_F	1.052	1.00
97_C	106_L	1.050	1.00
300_N	303_V	1.049	1.00
64_F	117_G	1.048	1.00
463_Y	520_E	1.045	1.00
500_V	503_L	1.043	1.00
214_I	263_N	1.038	1.00
55_I	119_I	1.033	1.00
331_L	340_S	1.031	1.00
242_F	260_Y	1.029	1.00
215_V	234_V	1.022	1.00
420_I	429_G	1.021	1.00
341_M	413_F	1.014	1.00
451_S	496_E	1.013	1.00
479_M	482_N	1.007	1.00
440_H	480_L	1.007	1.00
500_V	519_R	1.006	1.00
219_A	225_K	1.006	1.00
489_A	492_K	1.006	1.00
242_F	256_L	1.002	1.00
444_K	465_V	1.002	1.00
194_W	377_L	1.001	1.00
440_H	479_M	0.998	1.00
434_E	513_R	0.997	1.00
469_H	472_R	0.995	1.00
436_A	439_K	0.994	1.00
105_D	492_K	0.991	1.00
503_L	511_I	0.989	1.00
104_K	487_I	0.989	1.00
515_E	519_R	0.986	1.00
213_D	239_A	0.983	1.00
306_V	310_H	0.982	1.00
58_A	152_L	0.982	1.00
370_V	399_T	0.977	1.00
329_G	411_F	0.977	1.00
188_V	378_F	0.977	1.00
43_W	48_L	0.973	1.00
68_D	92_M	0.970	1.00
52_T	86_A	0.969	1.00
340_S	410_Y	0.969	1.00
514_V	518_K	0.963	1.00
28_K	240_T	0.960	1.00
302_E	306_V	0.957	1.00
49_M	52_T	0.953	1.00
101_L	109_R	0.953	1.00
69_K	114_E	0.950	1.00
31_L	81_Y	0.946	1.00
179_S	508_S	0.945	1.00
421_I	460_V	0.945	1.00
197_A	347_G	0.943	1.00
55_I	83_V	0.943	1.00
436_A	484_V	0.943	1.00
176_S	322_T	0.942	1.00
352_I	360_C	0.942	1.00
473_S	479_M	0.939	1.00
373_S	394_G	0.938	1.00
108_Y	177_Y	0.938	1.00
447_A	503_L	0.936	1.00
374_T	377_L	0.934	1.00
98_S	222_G	0.930	1.00
350_V	411_F	0.929	1.00
29_T	44_S	0.927	1.00
57_A	159_G	0.921	1.00
59_L	87_I	0.920	1.00
198_H	326_L	0.918	1.00
108_Y	111_E	0.913	1.00
402_R	415_S	0.911	1.00
439_K	483_H	0.911	1.00
299_L	304_I	0.911	1.00
274_L	455_I	0.909	1.00
74_V	77_V	0.908	1.00
273_R	300_N	0.907	1.00
74_V	140_L	0.905	1.00
234_V	241_G	0.905	1.00
197_A	375_P	0.903	1.00
84_Y	94_V	0.902	1.00
125_I	129_R	0.902	1.00
104_K	107_E	0.897	1.00
479_M	483_H	0.896	1.00
248_F	252_K	0.895	1.00
71_I	118_A	0.893	1.00
78_L	82_A	0.891	1.00
354_N	364_E	0.890	1.00
121_Y	124_F	0.890	1.00
199_L	236_G	0.886	1.00
57_A	60_A	0.885	1.00
482_N	485_K	0.884	1.00
48_L	52_T	0.884	1.00
350_V	368_I	0.883	1.00
41_E	51_E	0.883	1.00
190_H	325_T	0.877	1.00
216_W	244_Y	0.875	1.00
60_A	65_K	0.874	1.00
104_K	108_Y	0.872	1.00
79_E	82_A	0.871	1.00
62_L	117_G	0.870	1.00
32_L	214_I	0.866	1.00
75_P	123_E	0.866	1.00
19_M	22_F	0.864	1.00
60_A	163_K	0.863	1.00
272_Y	307_F	0.863	1.00
423_S	450_A	0.863	1.00
72_V	94_V	0.860	1.00
293_V	318_G	0.859	1.00
337_K	406_D	0.856	1.00
306_V	309_K	0.854	1.00
291_S	316_R	0.852	1.00
224_Q	321_Q	0.851	1.00
357_G	369_A	0.847	1.00
352_I	411_F	0.845	1.00
212_K	263_N	0.842	1.00
35_D	41_E	0.841	1.00
258_N	285_D	0.840	1.00
452_P	455_I	0.840	1.00
87_I	94_V	0.836	1.00
108_Y	384_D	0.835	1.00
47_K	51_E	0.835	1.00
126_G	129_R	0.833	1.00
81_Y	230_P	0.832	1.00
423_S	495_R	0.831	1.00
20_E	23_S	0.829	1.00
64_F	90_S	0.828	1.00
173_A	192_H	0.828	1.00
266_C	327_L	0.826	1.00
16_V	167_T	0.825	1.00
59_L	119_I	0.824	1.00
18_E	200_K	0.823	1.00
56_G	90_S	0.820	1.00
447_A	516_L	0.819	1.00
190_H	378_F	0.818	1.00
84_Y	227_V	0.818	1.00
81_Y	243_V	0.817	1.00
28_K	211_E	0.817	1.00
480_L	497_I	0.817	1.00
50_E	160_S	0.811	1.00
368_I	411_F	0.808	1.00
122_S	142_I	0.806	1.00
31_L	78_L	0.805	1.00
71_I	95_I	0.803	1.00
51_E	78_L	0.799	1.00
18_E	21_K	0.797	1.00
224_Q	326_L	0.796	1.00
324_S	377_L	0.795	1.00
29_T	33_W	0.794	1.00
386_E	389_K	0.794	1.00
263_N	290_H	0.790	1.00
363_G	407_E	0.788	1.00
388_M	392_I	0.788	1.00
214_I	261_K	0.787	1.00
280_G	283_R	0.786	1.00
355_E	367_D	0.778	1.00
57_A	163_K	0.777	1.00
19_M	85_L	0.772	1.00
465_V	502_S	0.771	1.00
218_T	271_E	0.768	1.00
349_Q	396_Y	0.768	1.00
251_E	255_E	0.766	1.00
272_Y	294_S	0.765	1.00
54_K	58_A	0.765	1.00
268_T	271_E	0.765	1.00
82_A	86_A	0.764	1.00
481_Q	493_Y	0.762	1.00
324_S	397_F	0.761	1.00
392_I	398_L	0.758	1.00
291_S	314_K	0.757	1.00
48_L	81_Y	0.755	1.00
248_F	271_E	0.754	1.00
284_F	287_S	0.753	1.00
461_K	520_E	0.753	1.00
172_M	191_T	0.752	1.00
466_L	472_R	0.752	1.00
466_L	470_E	0.750	1.00
419_D	434_E	0.749	1.00
484_V	488_T	0.749	1.00
447_A	511_I	0.747	1.00
109_R	187_G	0.745	1.00
41_E	79_E	0.745	1.00
384_D	388_M	0.743	1.00
84_Y	88_L	0.743	1.00
324_S	370_V	0.741	1.00
139_T	143_G	0.741	1.00
173_A	195_A	0.739	1.00
353_I	359_I	0.739	1.00
365_V	417_N	0.738	1.00
87_I	90_S	0.734	1.00
17_N	20_E	0.733	1.00
442_E	467_Q	0.733	1.00
350_V	403_A	0.733	1.00
273_R	277_K	0.731	1.00
16_V	192_H	0.730	1.00
273_R	306_V	0.728	1.00
478_K	481_Q	0.726	1.00
74_V	80_A	0.725	1.00
22_F	26_G	0.725	1.00
95_I	115_V	0.721	1.00
16_V	88_L	0.719	1.00
255_E	258_N	0.719	1.00
481_Q	484_V	0.718	1.00
27_Q	44_S	0.716	1.00
442_E	466_L	0.716	1.00
403_A	411_F	0.715	1.00
128_F	131_V	0.714	1.00
167_T	192_H	0.714	1.00
25_A	46_E	0.713	1.00
77_V	121_Y	0.713	1.00
289_L	292_A	0.713	1.00
437_L	446_C	0.711	1.00
490_P	493_Y	0.711	1.00
57_A	158_D	0.710	1.00
225_K	295_A	0.710	1.00
223_W	426_Y	0.709	1.00
257_L	262_I	0.709	1.00
120_V	139_T	0.708	1.00
333_D	336_I	0.708	1.00
324_S	328_V	0.708	1.00
94_V	227_V	0.706	1.00
174_F	190_H	0.706	1.00
463_Y	519_R	0.705	1.00
302_E	305_D	0.705	1.00
198_H	325_T	0.703	1.00
451_S	459_I	0.702	1.00
71_I	113_A	0.702	1.00
252_K	256_L	0.702	1.00
444_K	466_L	0.701	1.00
73_M	118_A	0.701	1.00
452_P	456_R	0.699	1.00
398_L	417_N	0.696	1.00
216_W	256_L	0.694	1.00
42_S	240_T	0.693	1.00
60_A	165_A	0.693	1.00
292_A	307_F	0.693	1.00
436_A	483_H	0.692	1.00
452_P	457_G	0.691	1.00
369_A	393_R	0.689	1.00
104_K	184_Q	0.689	1.00
228_W	266_C	0.689	1.00
65_K	92_M	0.688	1.00
198_H	228_W	0.687	1.00
70_L	117_G	0.684	1.00
431_F	434_E	0.683	1.00
19_M	49_M	0.682	1.00
57_A	160_S	0.681	1.00
316_R	332_K	0.679	1.00
117_G	138_I	0.678	1.00
423_S	460_V	0.678	1.00
266_C	318_G	0.677	1.00
73_M	124_F	0.677	1.00
55_I	59_L	0.674	1.00
318_G	327_L	0.673	1.00
83_V	87_I	0.672	1.00
65_K	116_K	0.672	1.00
403_A	414_E	0.672	1.00
209_I	264_V	0.672	1.00
244_Y	253_Y	0.669	1.00
299_L	315_V	0.668	1.00
449_V	520_E	0.664	1.00
210_S	290_H	0.663	1.00
56_G	86_A	0.663	1.00
258_N	287_S	0.663	1.00
362_P	407_E	0.663	1.00
58_A	158_D	0.658	1.00
55_I	58_A	0.657	1.00
216_W	257_L	0.657	1.00
430_P	448_V	0.656	1.00
81_Y	231_F	0.655	1.00
120_V	124_F	0.654	1.00
257_L	265_F	0.653	1.00
120_V	137_L	0.652	1.00
351_E	373_S	0.651	1.00
345_T	348_N	0.649	1.00
377_L	397_F	0.648	1.00
464_V	480_L	0.648	1.00
66_K	165_A	0.647	1.00
319_Y	328_V	0.646	1.00
447_A	513_R	0.644	1.00
74_V	119_I	0.643	1.00
114_E	382_F	0.643	1.00
273_R	302_E	0.643	1.00
194_W	379_K	0.641	1.00
18_E	196_F	0.639	1.00
504_P	516_L	0.639	1.00
255_E	284_F	0.638	1.00
54_K	160_S	0.638	1.00
122_S	139_T	0.636	1.00
215_V	264_V	0.636	1.00
373_S	395_D	0.635	1.00
60_A	162_F	0.635	1.00
218_T	268_T	0.635	1.00
102_R	105_D	0.632	1.00
66_K	167_T	0.631	1.00
265_F	292_A	0.630	1.00
43_W	47_K	0.629	1.00
458_S	517_R	0.627	1.00
430_P	513_R	0.626	1.00
198_H	327_L	0.625	1.00
21_K	238_G	0.624	1.00
229_S	266_C	0.624	1.00
352_I	405_K	0.622	1.00
282_K	310_H	0.621	1.00
53_N	162_F	0.621	1.00
437_L	484_V	0.621	1.00
52_T	56_G	0.620	1.00
74_V	83_V	0.620	1.00
132_S	135_D	0.618	1.00
112_H	382_F	0.617	1.00
170_D	379_K	0.616	1.00
258_N	288_A	0.616	1.00
127_A	130_D	0.616	1.00
443_V	464_V	0.615	1.00
321_Q	324_S	0.614	1.00
57_A	161_Q	0.614	1.00
162_F	165_A	0.614	1.00
468_N	471_K	0.614	1.00
423_S	456_R	0.612	1.00
317_D	339_G	0.611	1.00
52_T	55_I	0.610	1.00
63_G	92_M	0.609	1.00
184_Q	384_D	0.607	1.00
453_D	456_R	0.607	1.00
444_K	468_N	0.607	1.00
463_Y	498_E	0.606	1.00
120_V	125_I	0.605	1.00
228_W	326_L	0.605	1.00
25_A	211_E	0.605	1.00
69_K	383_K	0.605	1.00
378_F	391_Q	0.603	1.00
45_Y	239_A	0.602	1.00
256_L	259_R	0.602	1.00
25_A	238_G	0.601	1.00
57_A	162_F	0.601	1.00
200_K	236_G	0.601	1.00
443_V	446_C	0.597	1.00
174_F	195_A	0.596	1.00
79_E	121_Y	0.595	1.00
228_W	327_L	0.594	1.00
341_M	403_A	0.594	1.00
53_N	161_Q	0.593	1.00
209_I	213_D	0.593	1.00
60_A	164_T	0.593	1.00
298_P	413_F	0.593	1.00
219_A	266_C	0.592	1.00
93_V	175_L	0.590	1.00
308_Q	314_K	0.589	1.00
449_V	517_R	0.589	1.00
352_I	368_I	0.588	1.00
95_I	177_Y	0.588	1.00
253_Y	257_L	0.588	1.00
74_V	121_Y	0.587	1.00
469_H	473_S	0.587	1.00
240_T	260_Y	0.585	1.00
321_Q	399_T	0.583	1.00
138_I	141_S	0.582	1.00
303_V	306_V	0.582	1.00
209_I	239_A	0.582	1.00
283_R	286_L	0.582	1.00
29_T	214_I	0.582	1.00
116_K	136_K	0.579	1.00
418_D	458_S	0.578	1.00
54_K	57_A	0.578	1.00
384_D	390_T	0.578	1.00
206_W	346_P	0.577	1.00
31_L	241_G	0.576	1.00
198_H	202_S	0.576	1.00
175_L	189_V	0.575	1.00
354_N	357_G	0.574	1.00
217_A	241_G	0.574	1.00
74_V	120_V	0.574	1.00
220_A	223_W	0.573	1.00
305_D	308_Q	0.572	1.00
498_E	519_R	0.571	1.00
436_A	488_T	0.569	1.00
218_T	267_C	0.569	1.00
435_D	439_K	0.566	1.00
222_G	426_Y	0.566	1.00
200_K	204_G	0.566	1.00
124_F	127_A	0.563	1.00
430_P	450_A	0.563	1.00
225_K	293_V	0.563	1.00
57_A	61_D	0.562	1.00
96_P	176_S	0.561	1.00
421_I	450_A	0.561	1.00
440_H	443_V	0.560	1.00
174_F	227_V	0.560	1.00
363_G	404_R	0.560	1.00
299_L	317_D	0.560	1.00
93_V	382_F	0.559	1.00
434_E	462_A	0.559	1.00
353_I	396_Y	0.558	1.00
359_I	369_A	0.558	1.00
254_L	286_L	0.556	1.00
112_H	187_G	0.555	1.00
136_K	142_I	0.554	1.00
171_D	192_H	0.554	1.00
59_L	117_G	0.553	1.00
445_E	503_L	0.553	1.00
72_V	87_I	0.550	1.00
69_K	115_V	0.550	1.00
18_E	236_G	0.548	1.00
105_D	432_E	0.548	1.00
307_F	315_V	0.547	1.00
53_N	60_A	0.547	1.00
352_I	366_G	0.547	1.00
72_V	80_A	0.544	1.00
285_D	288_A	0.544	1.00
359_I	405_K	0.544	1.00
329_G	341_M	0.541	1.00
370_V	377_L	0.540	1.00
113_A	187_G	0.539	1.00
16_V	89_K	0.539	1.00
214_I	217_A	0.539	1.00
294_S	315_V	0.538	1.00
125_I	139_T	0.537	1.00
93_V	96_P	0.536	1.00
496_E	499_F	0.535	1.00
266_C	295_A	0.535	1.00
294_S	317_D	0.535	1.00
73_M	128_F	0.534	1.00
274_L	277_K	0.533	1.00
64_F	116_K	0.531	1.00
59_L	92_M	0.531	1.00
251_E	280_G	0.529	1.00
215_V	239_A	0.528	1.00
423_S	458_S	0.527	1.00
493_Y	497_I	0.526	1.00
51_E	55_I	0.526	1.00
17_N	166_D	0.526	1.00
248_F	253_Y	0.525	1.00
435_D	438_V	0.524	1.00
113_A	175_L	0.524	1.00
101_L	106_L	0.523	1.00
415_S	430_P	0.523	1.00
217_A	243_V	0.523	1.00
45_Y	235_L	0.522	1.00
269_P	297_E	0.521	1.00
253_Y	271_E	0.520	1.00
139_T	142_I	0.519	1.00
201_T	345_T	0.518	1.00
23_S	49_M	0.518	1.00
137_L	140_L	0.518	1.00
295_A	318_G	0.517	1.00
292_A	313_I	0.517	1.00
183_G	429_G	0.517	1.00
217_A	226_W	0.517	1.00
422_I	429_G	0.517	1.00
188_V	322_T	0.515	1.00
209_I	233_A	0.515	1.00
433_V	460_V	0.514	1.00
380_E	385_P	0.514	1.00
295_A	327_L	0.514	1.00
385_P	388_M	0.514	1.00
281_L	284_F	0.513	1.00
156_E	159_G	0.512	1.00
442_E	483_H	0.512	1.00
216_W	253_Y	0.512	1.00
502_S	505_K	0.511	1.00
34_E	259_R	0.510	1.00
126_G	130_D	0.510	1.00
204_G	233_A	0.509	1.00
97_C	110_I	0.508	1.00
51_E	153_L	0.508	1.00
32_L	35_D	0.508	1.00
46_E	49_M	0.507	1.00
73_M	127_A	0.507	1.00
202_S	228_W	0.507	1.00
132_S	136_K	0.506	1.00
226_W	230_P	0.505	1.00
305_D	338_P	0.505	1.00
453_D	457_G	0.504	1.00
349_Q	394_G	0.504	1.00
451_S	463_Y	0.503	1.00
318_G	330_V	0.502	1.00
388_M	391_Q	0.502	1.00
437_L	448_V	0.501	1.00
95_I	109_R	0.500	1.00
31_L	43_W	0.500	1.00
206_W	332_K	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1pg4A	1	0.9811	100	0.138	Contact Map
3etcA	2	0.9471	100	0.142	Contact Map
1ry2A	1	0.9641	100	0.145	Contact Map
4wd1A	1	0.9641	100	0.156	Contact Map
3c5eA	1	0.9735	100	0.16	Contact Map
3tsyA	2	0.7826	100	0.16	Contact Map
1mdbA	1	0.9622	100	0.166	Contact Map
2d1sA	1	0.9735	100	0.17	Contact Map
3ni2A	1	0.9603	100	0.173	Contact Map
2v7bA	1	0.9168	100	0.174	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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