GREMLIN Database
YCNJ - Copper transport protein YcnJ
UniProt: C0SP95 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 541 (513)
Sequences: 609 (446)
Seq/√Len: 19.7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
27_I47_I8.8661.00
294_L342_V7.1311.00
461_E505_V5.0591.00
100_A116_I5.0151.00
97_V124_D4.9461.00
460_F480_L4.8801.00
151_A184_S4.1821.00
482_V513_I4.1811.00
45_V62_V3.7681.00
37_E119_S3.6781.00
200_T216_Y3.5531.00
482_V521_I3.5071.00
97_V119_S3.4421.00
452_P458_N3.2901.00
119_S124_D3.2061.00
380_M410_G3.1610.99
45_V70_V3.1400.99
64_N68_D3.1240.99
166_Y169_K2.9870.99
106_S111_P2.9810.99
372_V416_T2.9030.99
371_L375_G2.8780.99
106_S110_H2.8290.99
369_A416_T2.7820.99
196_L221_L2.7740.99
24_H110_H2.7280.98
147_I187_A2.5310.97
355_I426_P2.5160.97
51_E106_S2.5050.97
106_S121_G2.4810.97
30_S116_I2.4710.97
160_F164_F2.4590.97
463_R505_V2.4190.97
10_L14_L2.3890.96
370_L377_F2.2560.95
231_I523_V2.1790.94
62_V69_R2.1720.94
106_S112_V2.1680.94
154_L303_V2.1650.94
354_I427_P2.1610.93
51_E110_H2.1420.93
417_A421_T2.1110.93
435_Y438_K2.1000.92
105_V149_Y2.0980.92
110_H121_G2.0850.92
151_A191_A2.0630.92
295_H373_K2.0590.92
62_V73_D2.0540.92
102_W114_G2.0440.91
8_I13_F2.0340.91
24_H278_H1.9840.90
305_G336_A1.9650.90
25_A121_G1.9620.90
527_T530_F1.9290.89
41_A89_L1.8400.86
282_V350_N1.8240.86
446_V464_V1.8150.85
305_G384_G1.8120.85
278_H373_K1.7980.85
284_E387_H1.7710.84
166_Y312_L1.7560.84
206_G210_S1.7360.83
526_L530_F1.7260.82
49_F109_G1.7220.82
228_S416_T1.7050.82
62_V90_K1.7010.81
190_L372_V1.6930.81
6_W10_L1.6930.81
464_V475_I1.6830.81
274_A446_V1.6710.80
446_V523_V1.6640.80
65_S96_D1.6360.79
110_H278_H1.6290.79
461_E507_Q1.6180.78
37_E124_D1.6170.78
292_D296_L1.6120.78
24_H121_G1.5950.77
481_T534_N1.5910.77
43_A112_V1.5820.76
432_E521_I1.5750.76
147_I150_T1.5720.76
302_W373_K1.5660.76
24_H108_D1.5620.75
379_F471_P1.5520.75
95_K122_K1.5500.75
37_E97_V1.5310.74
233_Q272_A1.5200.73
433_P462_L1.5030.73
108_D302_W1.4990.72
153_S299_A1.4900.72
60_I84_I1.4860.72
16_F45_V1.4850.72
451_S483_Y1.4820.71
302_W406_E1.4800.71
446_V475_I1.4780.71
355_I361_L1.4750.71
145_R279_A1.4710.71
13_F263_L1.4660.71
25_A110_H1.4640.70
498_L513_I1.4600.70
170_S268_G1.4540.70
62_V72_T1.4520.70
278_H295_H1.4510.70
51_E278_H1.4480.70
487_L491_E1.4470.70
144_D194_L1.4450.69
145_R269_L1.4360.69
290_L354_I1.4330.69
341_G379_F1.4290.69
412_A416_T1.4240.68
292_D520_K1.4240.68
51_E121_G1.4170.68
295_H302_W1.4130.68
186_A190_L1.3960.67
103_N205_G1.3840.66
440_I445_S1.3820.66
168_G207_G1.3820.66
85_M104_A1.3800.66
169_K200_T1.3590.65
498_L508_D1.3490.64
466_D470_D1.3490.64
122_K385_A1.3460.64
101_E491_E1.3460.64
188_L192_L1.3430.64
10_L335_W1.3430.64
372_V375_G1.3410.64
376_L448_L1.3400.63
368_Q372_V1.3280.63
381_L384_G1.3240.62
215_G218_R1.3150.62
102_W370_L1.3020.61
303_V410_G1.3000.61
228_S382_V1.2990.61
452_P456_G1.2940.61
109_G421_T1.2870.60
107_A149_Y1.2810.60
351_G366_Y1.2800.60
120_I529_D1.2740.59
153_S203_N1.2670.59
72_T90_K1.2650.59
108_D373_K1.2620.59
311_L375_G1.2620.59
388_F425_S1.2610.59
323_T412_A1.2590.58
373_K406_E1.2570.58
244_V272_A1.2510.58
380_M409_I1.2420.57
360_S366_Y1.2340.57
25_A106_S1.2300.57
55_E387_H1.2270.56
306_I384_G1.2220.56
383_L387_H1.2220.56
31_S44_Q1.2170.56
24_H106_S1.2100.55
347_G373_K1.2050.55
62_V70_V1.1990.55
144_D191_A1.1990.55
144_D268_G1.1970.55
232_I403_L1.1960.55
384_G464_V1.1880.54
385_A389_L1.1870.54
464_V478_I1.1870.54
197_P217_I1.1770.53
491_E494_S1.1770.53
231_I235_A1.1700.53
204_A220_T1.1660.53
153_S225_A1.1600.52
336_A420_F1.1530.52
438_K444_Q1.1500.52
273_K296_L1.1480.51
37_E122_K1.1470.51
236_L268_G1.1460.51
491_E515_E1.1460.51
60_I88_K1.1450.51
348_L351_G1.1410.51
24_H51_E1.1400.51
190_L468_N1.1350.51
260_T462_L1.1350.51
38_L120_I1.1330.50
413_V417_A1.1290.50
147_I311_L1.1280.50
120_I411_I1.1250.50
483_Y492_N1.1180.50
160_F516_K1.1160.49
448_L521_I1.1160.49
379_F409_I1.1150.49
292_D305_G1.1140.49
108_D278_H1.1140.49
348_L374_S1.1110.49
156_I213_Q1.1110.49
359_D363_H1.1100.49
24_H366_Y1.1070.49
54_E57_F1.1070.49
161_F165_W1.1040.49
453_N458_N1.1010.48
427_P514_N1.1010.48
311_L415_I1.0990.48
284_E349_L1.0970.48
10_L415_I1.0960.48
384_G388_F1.0950.48
399_I469_G1.0940.48
344_L377_F1.0930.48
380_M422_S1.0850.47
31_S46_E1.0840.47
34_E85_M1.0830.47
233_Q305_G1.0820.47
271_L523_V1.0780.47
484_K487_L1.0750.47
150_T179_R1.0700.46
404_K409_I1.0690.46
225_A374_S1.0650.46
62_V199_Q1.0620.46
164_F415_I1.0610.46
97_V123_A1.0610.46
28_V85_M1.0610.46
480_L486_G1.0580.46
62_V100_A1.0540.45
498_L528_G1.0440.45
376_L416_T1.0400.45
51_E456_G1.0400.45
457_K486_G1.0390.44
62_V421_T1.0350.44
257_G271_L1.0350.44
188_L284_E1.0320.44
244_V405_A1.0320.44
12_L40_S1.0270.44
55_E85_M1.0250.44
383_L409_I1.0240.44
160_F301_I1.0230.43
23_A108_D1.0210.43
333_S399_I1.0200.43
484_K491_E1.0190.43
6_W375_G1.0170.43
91_K136_A1.0140.43
100_A458_N1.0100.43
111_P121_G1.0080.42
155_F434_F1.0060.42
278_H302_W1.0050.42
302_W347_G1.0040.42
487_L515_E1.0040.42
45_V89_L1.0030.42
193_L480_L1.0020.42
279_A427_P1.0020.42
233_Q314_S1.0020.42
178_R239_L1.0000.42
438_K441_E0.9960.42
295_H406_E0.9940.42
527_T531_N0.9910.41
233_Q273_K0.9910.41
131_K355_I0.9900.41
418_A506_F0.9880.41
195_Q479_T0.9850.41
242_L274_A0.9840.41
155_F185_I0.9830.41
200_T211_A0.9830.41
280_A421_T0.9780.41
347_G367_G0.9780.41
43_A301_I0.9740.40
28_V47_I0.9680.40
193_L242_L0.9620.40
238_V264_I0.9590.39
263_L368_Q0.9570.39
351_G364_T0.9570.39
520_K536_M0.9570.39
148_L273_K0.9570.39
10_L310_V0.9530.39
493_K528_G0.9470.39
392_R395_R0.9450.39
332_F387_H0.9450.39
259_W379_F0.9430.38
39_K379_F0.9430.38
396_R416_T0.9420.38
69_R279_A0.9400.38
411_I525_G0.9380.38
143_A190_L0.9370.38
88_K382_V0.9290.38
218_R379_F0.9290.38
219_E458_N0.9290.38
311_L314_S0.9270.37
387_H406_E0.9260.37
268_G402_T0.9250.37
46_E260_T0.9240.37
31_S446_V0.9230.37
6_W12_L0.9180.37
281_V290_L0.9170.37
307_A340_V0.9170.37
376_L413_V0.9140.37
108_D295_H0.9130.37
380_M453_N0.9120.37
374_S515_E0.9110.37
224_T245_I0.9110.37
45_V71_D0.9080.36
24_H302_W0.9080.36
502_T522_K0.9080.36
106_S288_G0.9080.36
182_T374_S0.9070.36
41_A92_N0.9020.36
45_V305_G0.9000.36
279_A332_F0.8990.36
185_I237_F0.8980.36
233_Q356_R0.8980.36
38_L116_I0.8980.36
62_V305_G0.8960.36
451_S480_L0.8960.36
271_L413_V0.8950.36
344_L356_R0.8950.36
33_G159_V0.8930.35
16_F348_L0.8920.35
450_I468_N0.8890.35
16_F183_G0.8880.35
8_I187_A0.8860.35
6_W335_W0.8850.35
350_N417_A0.8850.35
75_T326_W0.8810.35
267_F520_K0.8800.35
361_L367_G0.8790.35
524_H534_N0.8790.35
214_P509_Q0.8780.35
297_T476_Q0.8770.35
453_N511_L0.8760.34
313_L399_I0.8740.34
51_E108_D0.8740.34
89_L141_T0.8710.34
112_V149_Y0.8690.34
121_G278_H0.8670.34
279_A354_I0.8650.34
91_K409_I0.8650.34
89_L105_V0.8600.34
466_D499_K0.8600.34
292_D421_T0.8600.34
148_L272_A0.8590.33
73_D90_K0.8590.33
12_L209_G0.8560.33
110_H340_V0.8540.33
181_L413_V0.8510.33
195_Q346_S0.8500.33
62_V71_D0.8500.33
455_P497_T0.8500.33
95_K239_L0.8490.33
368_Q371_L0.8490.33
462_L513_I0.8460.33
245_I249_R0.8440.33
160_F266_F0.8440.33
70_V90_K0.8430.33
195_Q199_Q0.8430.33
370_L492_N0.8410.32
474_N500_E0.8350.32
135_S224_T0.8330.32
194_L345_F0.8330.32
44_Q194_L0.8320.32
454_Q506_F0.8320.32
60_I105_V0.8320.32
156_I418_A0.8320.32
6_W164_F0.8310.32
161_F355_I0.8290.32
487_L518_N0.8280.32
68_D469_G0.8270.32
168_G371_L0.8260.32
12_L384_G0.8200.31
30_S280_A0.8190.31
57_F384_G0.8180.31
15_V345_F0.8180.31
64_N70_V0.8170.31
383_L393_K0.8130.31
490_S500_E0.8110.31
345_F405_A0.8110.31
296_L421_T0.8070.31
205_G299_A0.8070.31
62_V194_L0.8060.31
154_L184_S0.8060.31
411_I415_I0.7990.30
8_I12_L0.7990.30
76_E86_T0.7980.30
150_T184_S0.7980.30
221_L412_A0.7940.30
158_T478_I0.7890.30
267_F345_F0.7870.30
27_I266_F0.7860.29
88_K210_S0.7830.29
446_V528_G0.7820.29
24_H67_G0.7790.29
93_L224_T0.7790.29
121_G493_K0.7790.29
120_I255_S0.7780.29
273_K299_A0.7770.29
282_V353_F0.7760.29
164_F518_N0.7740.29
120_I217_I0.7740.29
176_R506_F0.7720.29
35_N498_L0.7720.29
149_Y477_Q0.7720.29
112_V348_L0.7690.29
23_A302_W0.7680.28
69_R89_L0.7680.28
106_S149_Y0.7670.28
56_G374_S0.7670.28
185_I244_V0.7670.28
390_L442_N0.7660.28
467_H516_K0.7640.28
158_T308_A0.7640.28
103_N106_S0.7600.28
61_K405_A0.7580.28
115_V236_L0.7580.28
218_R291_M0.7570.28
108_D347_G0.7560.28
189_G256_F0.7550.28
190_L263_L0.7540.28
115_V160_F0.7520.28
191_A375_G0.7490.28
263_L327_E0.7490.28
279_A294_L0.7490.28
249_R334_P0.7480.27
339_A483_Y0.7480.27
20_T403_L0.7470.27
202_A272_A0.7470.27
233_Q524_H0.7460.27
143_A147_I0.7450.27
69_R94_P0.7450.27
382_V509_Q0.7450.27
370_L482_V0.7450.27
124_D229_I0.7450.27
215_G219_E0.7440.27
293_F496_F0.7440.27
119_S192_L0.7440.27
356_R423_L0.7430.27
11_L256_F0.7430.27
213_Q444_Q0.7410.27
304_G347_G0.7410.27
220_T418_A0.7410.27
120_I259_W0.7370.27
139_P242_L0.7370.27
329_V405_A0.7360.27
47_I85_M0.7350.27
152_L156_I0.7330.27
446_V535_I0.7330.27
69_R459_V0.7330.27
64_N494_S0.7310.27
12_L239_L0.7300.27
30_S364_T0.7280.26
17_L344_L0.7280.26
475_I506_F0.7270.26
208_W212_F0.7260.26
12_L60_I0.7250.26
288_G353_F0.7230.26
51_E373_K0.7220.26
30_S279_A0.7210.26
154_L269_L0.7210.26
476_Q525_G0.7190.26
346_S417_A0.7190.26
367_G373_K0.7180.26
119_S528_G0.7180.26
58_H109_G0.7170.26
116_I521_I0.7160.26
193_L379_F0.7150.26
48_E84_I0.7150.26
364_T433_P0.7100.26
339_A451_S0.7080.25
7_W14_L0.7060.25
26_Y224_T0.7040.25
48_E102_W0.7040.25
105_V162_H0.7040.25
78_K82_H0.7020.25
30_S69_R0.7010.25
128_S483_Y0.6990.25
522_K536_M0.6990.25
295_H347_G0.6990.25
361_L374_S0.6990.25
526_L529_D0.6980.25
192_L237_F0.6980.25
495_T525_G0.6960.25
366_Y426_P0.6940.25
364_T426_P0.6920.25
485_T520_K0.6920.25
433_P442_N0.6920.25
199_Q297_T0.6900.25
164_F382_V0.6890.25
74_K112_V0.6880.24
177_T341_G0.6870.24
185_I352_F0.6870.24
311_L377_F0.6870.24
383_L418_A0.6870.24
238_V271_L0.6860.24
169_K238_V0.6860.24
507_Q521_I0.6850.24
167_K369_A0.6840.24
116_I152_L0.6830.24
119_S388_F0.6800.24
120_I218_R0.6800.24
145_R511_L0.6780.24
36_S450_I0.6780.24
224_T400_S0.6770.24
68_D74_K0.6760.24
62_V98_Y0.6730.24
132_A382_V0.6720.24
281_V459_V0.6720.24
272_A393_K0.6710.24
11_L228_S0.6710.24
387_H399_I0.6710.24
29_K128_S0.6710.24
326_W396_R0.6690.24
41_A149_Y0.6680.24
111_P149_Y0.6680.24
405_A516_K0.6630.23
201_K421_T0.6620.23
58_H107_A0.6610.23
267_F293_F0.6590.23
152_L170_S0.6580.23
29_K164_F0.6580.23
447_S465_T0.6570.23
230_W300_S0.6570.23
138_N415_I0.6570.23
19_K340_V0.6560.23
155_F270_L0.6550.23
35_N117_P0.6530.23
99_R346_S0.6520.23
385_A408_A0.6510.23
131_K330_R0.6490.23
190_L194_L0.6490.23
163_L206_G0.6470.23
274_A277_G0.6460.23
12_L136_A0.6460.23
58_H111_P0.6450.23
265_F272_A0.6450.23
185_I418_A0.6450.23
278_H347_G0.6430.22
450_I456_G0.6420.22
164_F409_I0.6420.22
280_A506_F0.6410.22
104_A275_F0.6400.22
409_I416_T0.6390.22
205_G480_L0.6380.22
295_H304_G0.6380.22
109_G152_L0.6370.22
35_N307_A0.6370.22
460_F526_L0.6370.22
223_E450_I0.6370.22
44_Q86_T0.6360.22
115_V306_I0.6350.22
305_G526_L0.6330.22
115_V137_L0.6320.22
94_P127_F0.6320.22
186_A208_W0.6310.22
180_I249_R0.6290.22
153_S446_V0.6290.22
88_K332_F0.6290.22
36_S122_K0.6290.22
243_S262_P0.6290.22
28_V191_A0.6280.22
308_A402_T0.6270.22
250_K511_L0.6260.22
439_A480_L0.6250.22
202_A425_S0.6250.22
160_F349_L0.6240.22
281_V285_K0.6240.22
109_G233_Q0.6230.22
298_S346_S0.6230.22
105_V390_L0.6210.21
103_N299_A0.6210.21
152_L384_G0.6210.21
246_P511_L0.6190.21
97_V384_G0.6180.21
225_A418_A0.6180.21
147_I207_G0.6180.21
29_K179_R0.6170.21
241_A262_P0.6160.21
421_T506_F0.6150.21
349_L531_N0.6150.21
198_I504_G0.6140.21
90_K523_V0.6140.21
72_T88_K0.6140.21
312_L376_L0.6140.21
408_A505_V0.6140.21
159_V397_T0.6140.21
278_H366_Y0.6130.21
399_I402_T0.6120.21
93_L118_F0.6100.21
434_F472_V0.6090.21
223_E294_L0.6080.21
33_G50_N0.6070.21
355_I521_I0.6070.21
446_V467_H0.6040.21
195_Q277_G0.6040.21
62_V419_V0.6040.21
9_I14_L0.6040.21
51_E112_V0.6040.21
354_I425_S0.6030.21
305_G308_A0.6030.21
158_T265_F0.6030.21
141_T492_N0.6020.21
51_E384_G0.6020.21
120_I211_A0.6020.21
383_L495_T0.6010.21
188_L299_A0.6000.21
63_Y151_A0.5990.21
202_A420_F0.5990.21
186_A382_V0.5980.20
298_S399_I0.5980.20
104_A112_V0.5960.20
282_V390_L0.5950.20
192_L296_L0.5940.20
79_K82_H0.5940.20
36_S43_A0.5940.20
374_S378_V0.5930.20
243_S394_Q0.5930.20
206_G275_F0.5920.20
95_K333_S0.5920.20
30_S434_F0.5920.20
199_Q277_G0.5910.20
305_G339_A0.5890.20
12_L29_K0.5890.20
42_P425_S0.5890.20
106_S456_G0.5890.20
487_L490_S0.5880.20
354_I514_N0.5880.20
112_V419_V0.5870.20
344_L471_P0.5870.20
205_G521_I0.5870.20
103_N343_I0.5860.20
309_L403_L0.5860.20
366_Y369_A0.5850.20
374_S413_V0.5850.20
119_S290_L0.5850.20
476_Q526_L0.5840.20
239_L271_L0.5830.20
501_K505_V0.5830.20
142_A420_F0.5830.20
111_P284_E0.5830.20
164_F239_L0.5820.20
132_A397_T0.5810.20
367_G425_S0.5810.20
450_I460_F0.5810.20
130_Q486_G0.5800.20
53_V366_Y0.5780.20
384_G387_H0.5780.20
255_S259_W0.5770.20
108_D406_E0.5770.20
178_R205_G0.5760.20
53_V58_H0.5760.20
217_I227_G0.5750.20
19_K509_Q0.5750.20
349_L352_F0.5750.20
41_A268_G0.5740.19
464_V525_G0.5720.19
23_A32_P0.5710.19
64_N112_V0.5710.19
110_H366_Y0.5700.19
370_L525_G0.5700.19
376_L409_I0.5700.19
37_E116_I0.5690.19
50_N299_A0.5690.19
345_F378_V0.5690.19
70_V419_V0.5680.19
66_N451_S0.5670.19
11_L459_V0.5670.19
40_S269_L0.5660.19
40_S187_A0.5660.19
138_N312_L0.5650.19
359_D382_V0.5640.19
95_K121_G0.5640.19
134_D309_L0.5630.19
98_Y458_N0.5630.19
177_T200_T0.5620.19
299_A364_T0.5620.19
277_G295_H0.5620.19
73_D260_T0.5620.19
22_F379_F0.5600.19
169_K328_T0.5580.19
191_A480_L0.5580.19
249_R275_F0.5570.19
177_T264_I0.5570.19
108_D370_L0.5570.19
102_W280_A0.5550.19
9_I234_A0.5540.19
108_D121_G0.5540.19
87_V139_P0.5540.19
393_K409_I0.5540.19
38_L87_V0.5530.19
270_L392_R0.5520.19
190_L481_T0.5510.19
24_H373_K0.5510.19
33_G482_V0.5500.19
161_F426_P0.5500.19
104_A536_M0.5500.19
65_S329_V0.5490.18
448_L483_Y0.5480.18
21_S111_P0.5480.18
110_H373_K0.5470.18
291_M345_F0.5470.18
306_I493_K0.5460.18
277_G284_E0.5450.18
5_R45_V0.5450.18
136_A397_T0.5450.18
70_V450_I0.5440.18
226_G344_L0.5430.18
340_V403_L0.5420.18
382_V482_V0.5410.18
194_L454_Q0.5410.18
39_K44_Q0.5400.18
45_V333_S0.5400.18
206_G409_I0.5390.18
182_T186_A0.5370.18
44_Q374_S0.5370.18
228_S260_T0.5370.18
302_W367_G0.5370.18
94_P337_L0.5360.18
151_A424_P0.5360.18
240_L514_N0.5360.18
120_I383_L0.5360.18
198_I202_A0.5360.18
278_H406_E0.5350.18
76_E209_G0.5340.18
348_L417_A0.5340.18
216_Y220_T0.5320.18
164_F335_W0.5310.18
54_E98_Y0.5310.18
304_G373_K0.5310.18
65_S119_S0.5300.18
342_V505_V0.5300.18
290_L419_V0.5290.18
10_L379_F0.5280.18
95_K451_S0.5280.18
194_L238_V0.5280.18
467_H478_I0.5280.18
238_V364_T0.5260.18
208_W211_A0.5260.18
147_I314_S0.5240.18
236_L272_A0.5240.18
129_S376_L0.5230.18
221_L450_I0.5230.18
97_V235_A0.5230.18
33_G377_F0.5220.17
50_N87_V0.5220.17
233_Q274_A0.5200.17
192_L234_A0.5200.17
9_I22_F0.5180.17
463_R468_N0.5180.17
211_A217_I0.5180.17
297_T352_F0.5160.17
51_E302_W0.5150.17
23_A110_H0.5150.17
233_Q350_N0.5140.17
199_Q226_G0.5130.17
145_R161_F0.5130.17
146_A414_L0.5120.17
152_L273_K0.5120.17
264_I378_V0.5110.17
273_K389_L0.5110.17
66_N145_R0.5110.17
278_H336_A0.5100.17
358_M509_Q0.5100.17
500_E503_K0.5100.17
126_G232_I0.5090.17
236_L294_L0.5080.17
7_W189_G0.5070.17
190_L378_V0.5070.17
36_S140_G0.5060.17
36_S79_K0.5060.17
119_S477_Q0.5060.17
353_F356_R0.5060.17
152_L355_I0.5060.17
352_F356_R0.5050.17
180_I264_I0.5040.17
457_K485_T0.5040.17
9_I120_I0.5020.17
131_K264_I0.5010.17
528_G531_N0.5010.17
151_A420_F0.5010.17
261_A382_V0.5000.17
480_L498_L0.5000.17
25_A42_P0.5000.17
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
1lyqA 1 0.1811 100 0.787 Contact Map
2c9rA 1 0.1756 100 0.792 Contact Map
1qfhA 2 0.1885 88.7 0.962 Contact Map
3m7oA 3 0.1756 85.7 0.964 Contact Map
4n0rA 2 0.1534 85.5 0.964 Contact Map
2ds4A 1 0.2015 84.2 0.965 Contact Map
4umgA 1 0.1848 82.8 0.965 Contact Map
1wlhA 2 0.1774 81.7 0.966 Contact Map
2d7pA 1 0.1848 81.5 0.966 Contact Map
4e9lA 1 0.0092 81.2 0.966 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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