YCNJ - BACSU - GREMLIN Contacts

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YCNJ - Copper transport protein YcnJ

UniProt:	C0SP95	Sequences: MKRNRWWIILLLFLVFLPKTSFAHAYIVKSSPGENSELKSAPAQVEIEFNEPVEEGFHYIKVYNSNGDRVDTDKTEIKKDNHHIMTVKLKKNLPKDVYRAEWNAVSADGHPVSGVIPFSIGKADGGFSSQKAADSALNPGTAADRAILYTALSLFIGTVFFHLFWYKGKSEQLVKRTRRILTGSIAALGLALLLQLPIQTKANAGGGWGSAFQPGYIRETLFETAGGSIWIIQAALFVLLALSVIPAIRKNRFSSFGYWTAPLIFFFGLLLAKAFTGHAAVVEEKTVGILMDFLHLTSASIWVGGIAALVLLLSKEWRQPDKTLAWETVRRFSPWALTAVGVILFSGLLNGFFIIRSMDSLFHTAYGQALLVKSGLFVFMLVLGAIHFLLTRKQRRTGISRTLKAEWAIGIAVLITAAVFTSLPSPPEPAPEPFYQTKAIENGQSVSLSISPNQPGKNVFELRVTDHNGDPVKNIQQITLTVYKTGLSGSENKSTFTLKEKTKGVFQDQNLSINEKGNWKIKVHGLTGDFNEINIMFTKTN	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	541 (513)
Sequences:	609 (446)
Seq/√Len:	19.7

BACSU - YCNJ

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
27_I	47_I	8.866	1.00
294_L	342_V	7.131	1.00
461_E	505_V	5.059	1.00
100_A	116_I	5.015	1.00
97_V	124_D	4.946	1.00
460_F	480_L	4.880	1.00
151_A	184_S	4.182	1.00
482_V	513_I	4.181	1.00
45_V	62_V	3.768	1.00
37_E	119_S	3.678	1.00
200_T	216_Y	3.553	1.00
482_V	521_I	3.507	1.00
97_V	119_S	3.442	1.00
452_P	458_N	3.290	1.00
119_S	124_D	3.206	1.00
380_M	410_G	3.161	0.99
45_V	70_V	3.140	0.99
64_N	68_D	3.124	0.99
166_Y	169_K	2.987	0.99
106_S	111_P	2.981	0.99
372_V	416_T	2.903	0.99
371_L	375_G	2.878	0.99
106_S	110_H	2.829	0.99
369_A	416_T	2.782	0.99
196_L	221_L	2.774	0.99
24_H	110_H	2.728	0.98
147_I	187_A	2.531	0.97
355_I	426_P	2.516	0.97
51_E	106_S	2.505	0.97
106_S	121_G	2.481	0.97
30_S	116_I	2.471	0.97
160_F	164_F	2.459	0.97
463_R	505_V	2.419	0.97
10_L	14_L	2.389	0.96
370_L	377_F	2.256	0.95
231_I	523_V	2.179	0.94
62_V	69_R	2.172	0.94
106_S	112_V	2.168	0.94
154_L	303_V	2.165	0.94
354_I	427_P	2.161	0.93
51_E	110_H	2.142	0.93
417_A	421_T	2.111	0.93
435_Y	438_K	2.100	0.92
105_V	149_Y	2.098	0.92
110_H	121_G	2.085	0.92
151_A	191_A	2.063	0.92
295_H	373_K	2.059	0.92
62_V	73_D	2.054	0.92
102_W	114_G	2.044	0.91
8_I	13_F	2.034	0.91
24_H	278_H	1.984	0.90
305_G	336_A	1.965	0.90
25_A	121_G	1.962	0.90
527_T	530_F	1.929	0.89
41_A	89_L	1.840	0.86
282_V	350_N	1.824	0.86
446_V	464_V	1.815	0.85
305_G	384_G	1.812	0.85
278_H	373_K	1.798	0.85
284_E	387_H	1.771	0.84
166_Y	312_L	1.756	0.84
206_G	210_S	1.736	0.83
526_L	530_F	1.726	0.82
49_F	109_G	1.722	0.82
228_S	416_T	1.705	0.82
62_V	90_K	1.701	0.81
190_L	372_V	1.693	0.81
6_W	10_L	1.693	0.81
464_V	475_I	1.683	0.81
274_A	446_V	1.671	0.80
446_V	523_V	1.664	0.80
65_S	96_D	1.636	0.79
110_H	278_H	1.629	0.79
461_E	507_Q	1.618	0.78
37_E	124_D	1.617	0.78
292_D	296_L	1.612	0.78
24_H	121_G	1.595	0.77
481_T	534_N	1.591	0.77
43_A	112_V	1.582	0.76
432_E	521_I	1.575	0.76
147_I	150_T	1.572	0.76
302_W	373_K	1.566	0.76
24_H	108_D	1.562	0.75
379_F	471_P	1.552	0.75
95_K	122_K	1.550	0.75
37_E	97_V	1.531	0.74
233_Q	272_A	1.520	0.73
433_P	462_L	1.503	0.73
108_D	302_W	1.499	0.72
153_S	299_A	1.490	0.72
60_I	84_I	1.486	0.72
16_F	45_V	1.485	0.72
451_S	483_Y	1.482	0.71
302_W	406_E	1.480	0.71
446_V	475_I	1.478	0.71
355_I	361_L	1.475	0.71
145_R	279_A	1.471	0.71
13_F	263_L	1.466	0.71
25_A	110_H	1.464	0.70
498_L	513_I	1.460	0.70
170_S	268_G	1.454	0.70
62_V	72_T	1.452	0.70
278_H	295_H	1.451	0.70
51_E	278_H	1.448	0.70
487_L	491_E	1.447	0.70
144_D	194_L	1.445	0.69
145_R	269_L	1.436	0.69
290_L	354_I	1.433	0.69
341_G	379_F	1.429	0.69
412_A	416_T	1.424	0.68
292_D	520_K	1.424	0.68
51_E	121_G	1.417	0.68
295_H	302_W	1.413	0.68
186_A	190_L	1.396	0.67
103_N	205_G	1.384	0.66
440_I	445_S	1.382	0.66
168_G	207_G	1.382	0.66
85_M	104_A	1.380	0.66
169_K	200_T	1.359	0.65
498_L	508_D	1.349	0.64
466_D	470_D	1.349	0.64
122_K	385_A	1.346	0.64
101_E	491_E	1.346	0.64
188_L	192_L	1.343	0.64
10_L	335_W	1.343	0.64
372_V	375_G	1.341	0.64
376_L	448_L	1.340	0.63
368_Q	372_V	1.328	0.63
381_L	384_G	1.324	0.62
215_G	218_R	1.315	0.62
102_W	370_L	1.302	0.61
303_V	410_G	1.300	0.61
228_S	382_V	1.299	0.61
452_P	456_G	1.294	0.61
109_G	421_T	1.287	0.60
107_A	149_Y	1.281	0.60
351_G	366_Y	1.280	0.60
120_I	529_D	1.274	0.59
153_S	203_N	1.267	0.59
72_T	90_K	1.265	0.59
108_D	373_K	1.262	0.59
311_L	375_G	1.262	0.59
388_F	425_S	1.261	0.59
323_T	412_A	1.259	0.58
373_K	406_E	1.257	0.58
244_V	272_A	1.251	0.58
380_M	409_I	1.242	0.57
360_S	366_Y	1.234	0.57
25_A	106_S	1.230	0.57
55_E	387_H	1.227	0.56
306_I	384_G	1.222	0.56
383_L	387_H	1.222	0.56
31_S	44_Q	1.217	0.56
24_H	106_S	1.210	0.55
347_G	373_K	1.205	0.55
62_V	70_V	1.199	0.55
144_D	191_A	1.199	0.55
144_D	268_G	1.197	0.55
232_I	403_L	1.196	0.55
384_G	464_V	1.188	0.54
385_A	389_L	1.187	0.54
464_V	478_I	1.187	0.54
197_P	217_I	1.177	0.53
491_E	494_S	1.177	0.53
231_I	235_A	1.170	0.53
204_A	220_T	1.166	0.53
153_S	225_A	1.160	0.52
336_A	420_F	1.153	0.52
438_K	444_Q	1.150	0.52
273_K	296_L	1.148	0.51
37_E	122_K	1.147	0.51
236_L	268_G	1.146	0.51
491_E	515_E	1.146	0.51
60_I	88_K	1.145	0.51
348_L	351_G	1.141	0.51
24_H	51_E	1.140	0.51
190_L	468_N	1.135	0.51
260_T	462_L	1.135	0.51
38_L	120_I	1.133	0.50
413_V	417_A	1.129	0.50
147_I	311_L	1.128	0.50
120_I	411_I	1.125	0.50
483_Y	492_N	1.118	0.50
160_F	516_K	1.116	0.49
448_L	521_I	1.116	0.49
379_F	409_I	1.115	0.49
292_D	305_G	1.114	0.49
108_D	278_H	1.114	0.49
348_L	374_S	1.111	0.49
156_I	213_Q	1.111	0.49
359_D	363_H	1.110	0.49
24_H	366_Y	1.107	0.49
54_E	57_F	1.107	0.49
161_F	165_W	1.104	0.49
453_N	458_N	1.101	0.48
427_P	514_N	1.101	0.48
311_L	415_I	1.099	0.48
284_E	349_L	1.097	0.48
10_L	415_I	1.096	0.48
384_G	388_F	1.095	0.48
399_I	469_G	1.094	0.48
344_L	377_F	1.093	0.48
380_M	422_S	1.085	0.47
31_S	46_E	1.084	0.47
34_E	85_M	1.083	0.47
233_Q	305_G	1.082	0.47
271_L	523_V	1.078	0.47
484_K	487_L	1.075	0.47
150_T	179_R	1.070	0.46
404_K	409_I	1.069	0.46
225_A	374_S	1.065	0.46
62_V	199_Q	1.062	0.46
164_F	415_I	1.061	0.46
97_V	123_A	1.061	0.46
28_V	85_M	1.061	0.46
480_L	486_G	1.058	0.46
62_V	100_A	1.054	0.45
498_L	528_G	1.044	0.45
376_L	416_T	1.040	0.45
51_E	456_G	1.040	0.45
457_K	486_G	1.039	0.44
62_V	421_T	1.035	0.44
257_G	271_L	1.035	0.44
188_L	284_E	1.032	0.44
244_V	405_A	1.032	0.44
12_L	40_S	1.027	0.44
55_E	85_M	1.025	0.44
383_L	409_I	1.024	0.44
160_F	301_I	1.023	0.43
23_A	108_D	1.021	0.43
333_S	399_I	1.020	0.43
484_K	491_E	1.019	0.43
6_W	375_G	1.017	0.43
91_K	136_A	1.014	0.43
100_A	458_N	1.010	0.43
111_P	121_G	1.008	0.42
155_F	434_F	1.006	0.42
278_H	302_W	1.005	0.42
302_W	347_G	1.004	0.42
487_L	515_E	1.004	0.42
45_V	89_L	1.003	0.42
193_L	480_L	1.002	0.42
279_A	427_P	1.002	0.42
233_Q	314_S	1.002	0.42
178_R	239_L	1.000	0.42
438_K	441_E	0.996	0.42
295_H	406_E	0.994	0.42
527_T	531_N	0.991	0.41
233_Q	273_K	0.991	0.41
131_K	355_I	0.990	0.41
418_A	506_F	0.988	0.41
195_Q	479_T	0.985	0.41
242_L	274_A	0.984	0.41
155_F	185_I	0.983	0.41
200_T	211_A	0.983	0.41
280_A	421_T	0.978	0.41
347_G	367_G	0.978	0.41
43_A	301_I	0.974	0.40
28_V	47_I	0.968	0.40
193_L	242_L	0.962	0.40
238_V	264_I	0.959	0.39
263_L	368_Q	0.957	0.39
351_G	364_T	0.957	0.39
520_K	536_M	0.957	0.39
148_L	273_K	0.957	0.39
10_L	310_V	0.953	0.39
493_K	528_G	0.947	0.39
392_R	395_R	0.945	0.39
332_F	387_H	0.945	0.39
259_W	379_F	0.943	0.38
39_K	379_F	0.943	0.38
396_R	416_T	0.942	0.38
69_R	279_A	0.940	0.38
411_I	525_G	0.938	0.38
143_A	190_L	0.937	0.38
88_K	382_V	0.929	0.38
218_R	379_F	0.929	0.38
219_E	458_N	0.929	0.38
311_L	314_S	0.927	0.37
387_H	406_E	0.926	0.37
268_G	402_T	0.925	0.37
46_E	260_T	0.924	0.37
31_S	446_V	0.923	0.37
6_W	12_L	0.918	0.37
281_V	290_L	0.917	0.37
307_A	340_V	0.917	0.37
376_L	413_V	0.914	0.37
108_D	295_H	0.913	0.37
380_M	453_N	0.912	0.37
374_S	515_E	0.911	0.37
224_T	245_I	0.911	0.37
45_V	71_D	0.908	0.36
24_H	302_W	0.908	0.36
502_T	522_K	0.908	0.36
106_S	288_G	0.908	0.36
182_T	374_S	0.907	0.36
41_A	92_N	0.902	0.36
45_V	305_G	0.900	0.36
279_A	332_F	0.899	0.36
185_I	237_F	0.898	0.36
233_Q	356_R	0.898	0.36
38_L	116_I	0.898	0.36
62_V	305_G	0.896	0.36
451_S	480_L	0.896	0.36
271_L	413_V	0.895	0.36
344_L	356_R	0.895	0.36
33_G	159_V	0.893	0.35
16_F	348_L	0.892	0.35
450_I	468_N	0.889	0.35
16_F	183_G	0.888	0.35
8_I	187_A	0.886	0.35
6_W	335_W	0.885	0.35
350_N	417_A	0.885	0.35
75_T	326_W	0.881	0.35
267_F	520_K	0.880	0.35
361_L	367_G	0.879	0.35
524_H	534_N	0.879	0.35
214_P	509_Q	0.878	0.35
297_T	476_Q	0.877	0.35
453_N	511_L	0.876	0.34
313_L	399_I	0.874	0.34
51_E	108_D	0.874	0.34
89_L	141_T	0.871	0.34
112_V	149_Y	0.869	0.34
121_G	278_H	0.867	0.34
279_A	354_I	0.865	0.34
91_K	409_I	0.865	0.34
89_L	105_V	0.860	0.34
466_D	499_K	0.860	0.34
292_D	421_T	0.860	0.34
148_L	272_A	0.859	0.33
73_D	90_K	0.859	0.33
12_L	209_G	0.856	0.33
110_H	340_V	0.854	0.33
181_L	413_V	0.851	0.33
195_Q	346_S	0.850	0.33
62_V	71_D	0.850	0.33
455_P	497_T	0.850	0.33
95_K	239_L	0.849	0.33
368_Q	371_L	0.849	0.33
462_L	513_I	0.846	0.33
245_I	249_R	0.844	0.33
160_F	266_F	0.844	0.33
70_V	90_K	0.843	0.33
195_Q	199_Q	0.843	0.33
370_L	492_N	0.841	0.32
474_N	500_E	0.835	0.32
135_S	224_T	0.833	0.32
194_L	345_F	0.833	0.32
44_Q	194_L	0.832	0.32
454_Q	506_F	0.832	0.32
60_I	105_V	0.832	0.32
156_I	418_A	0.832	0.32
6_W	164_F	0.831	0.32
161_F	355_I	0.829	0.32
487_L	518_N	0.828	0.32
68_D	469_G	0.827	0.32
168_G	371_L	0.826	0.32
12_L	384_G	0.820	0.31
30_S	280_A	0.819	0.31
57_F	384_G	0.818	0.31
15_V	345_F	0.818	0.31
64_N	70_V	0.817	0.31
383_L	393_K	0.813	0.31
490_S	500_E	0.811	0.31
345_F	405_A	0.811	0.31
296_L	421_T	0.807	0.31
205_G	299_A	0.807	0.31
62_V	194_L	0.806	0.31
154_L	184_S	0.806	0.31
411_I	415_I	0.799	0.30
8_I	12_L	0.799	0.30
76_E	86_T	0.798	0.30
150_T	184_S	0.798	0.30
221_L	412_A	0.794	0.30
158_T	478_I	0.789	0.30
267_F	345_F	0.787	0.30
27_I	266_F	0.786	0.29
88_K	210_S	0.783	0.29
446_V	528_G	0.782	0.29
24_H	67_G	0.779	0.29
93_L	224_T	0.779	0.29
121_G	493_K	0.779	0.29
120_I	255_S	0.778	0.29
273_K	299_A	0.777	0.29
282_V	353_F	0.776	0.29
164_F	518_N	0.774	0.29
120_I	217_I	0.774	0.29
176_R	506_F	0.772	0.29
35_N	498_L	0.772	0.29
149_Y	477_Q	0.772	0.29
112_V	348_L	0.769	0.29
23_A	302_W	0.768	0.28
69_R	89_L	0.768	0.28
106_S	149_Y	0.767	0.28
56_G	374_S	0.767	0.28
185_I	244_V	0.767	0.28
390_L	442_N	0.766	0.28
467_H	516_K	0.764	0.28
158_T	308_A	0.764	0.28
103_N	106_S	0.760	0.28
61_K	405_A	0.758	0.28
115_V	236_L	0.758	0.28
218_R	291_M	0.757	0.28
108_D	347_G	0.756	0.28
189_G	256_F	0.755	0.28
190_L	263_L	0.754	0.28
115_V	160_F	0.752	0.28
191_A	375_G	0.749	0.28
263_L	327_E	0.749	0.28
279_A	294_L	0.749	0.28
249_R	334_P	0.748	0.27
339_A	483_Y	0.748	0.27
20_T	403_L	0.747	0.27
202_A	272_A	0.747	0.27
233_Q	524_H	0.746	0.27
143_A	147_I	0.745	0.27
69_R	94_P	0.745	0.27
382_V	509_Q	0.745	0.27
370_L	482_V	0.745	0.27
124_D	229_I	0.745	0.27
215_G	219_E	0.744	0.27
293_F	496_F	0.744	0.27
119_S	192_L	0.744	0.27
356_R	423_L	0.743	0.27
11_L	256_F	0.743	0.27
213_Q	444_Q	0.741	0.27
304_G	347_G	0.741	0.27
220_T	418_A	0.741	0.27
120_I	259_W	0.737	0.27
139_P	242_L	0.737	0.27
329_V	405_A	0.736	0.27
47_I	85_M	0.735	0.27
152_L	156_I	0.733	0.27
446_V	535_I	0.733	0.27
69_R	459_V	0.733	0.27
64_N	494_S	0.731	0.27
12_L	239_L	0.730	0.27
30_S	364_T	0.728	0.26
17_L	344_L	0.728	0.26
475_I	506_F	0.727	0.26
208_W	212_F	0.726	0.26
12_L	60_I	0.725	0.26
288_G	353_F	0.723	0.26
51_E	373_K	0.722	0.26
30_S	279_A	0.721	0.26
154_L	269_L	0.721	0.26
476_Q	525_G	0.719	0.26
346_S	417_A	0.719	0.26
367_G	373_K	0.718	0.26
119_S	528_G	0.718	0.26
58_H	109_G	0.717	0.26
116_I	521_I	0.716	0.26
193_L	379_F	0.715	0.26
48_E	84_I	0.715	0.26
364_T	433_P	0.710	0.26
339_A	451_S	0.708	0.25
7_W	14_L	0.706	0.25
26_Y	224_T	0.704	0.25
48_E	102_W	0.704	0.25
105_V	162_H	0.704	0.25
78_K	82_H	0.702	0.25
30_S	69_R	0.701	0.25
128_S	483_Y	0.699	0.25
522_K	536_M	0.699	0.25
295_H	347_G	0.699	0.25
361_L	374_S	0.699	0.25
526_L	529_D	0.698	0.25
192_L	237_F	0.698	0.25
495_T	525_G	0.696	0.25
366_Y	426_P	0.694	0.25
364_T	426_P	0.692	0.25
485_T	520_K	0.692	0.25
433_P	442_N	0.692	0.25
199_Q	297_T	0.690	0.25
164_F	382_V	0.689	0.25
74_K	112_V	0.688	0.24
177_T	341_G	0.687	0.24
185_I	352_F	0.687	0.24
311_L	377_F	0.687	0.24
383_L	418_A	0.687	0.24
238_V	271_L	0.686	0.24
169_K	238_V	0.686	0.24
507_Q	521_I	0.685	0.24
167_K	369_A	0.684	0.24
116_I	152_L	0.683	0.24
119_S	388_F	0.680	0.24
120_I	218_R	0.680	0.24
145_R	511_L	0.678	0.24
36_S	450_I	0.678	0.24
224_T	400_S	0.677	0.24
68_D	74_K	0.676	0.24
62_V	98_Y	0.673	0.24
132_A	382_V	0.672	0.24
281_V	459_V	0.672	0.24
272_A	393_K	0.671	0.24
11_L	228_S	0.671	0.24
387_H	399_I	0.671	0.24
29_K	128_S	0.671	0.24
326_W	396_R	0.669	0.24
41_A	149_Y	0.668	0.24
111_P	149_Y	0.668	0.24
405_A	516_K	0.663	0.23
201_K	421_T	0.662	0.23
58_H	107_A	0.661	0.23
267_F	293_F	0.659	0.23
152_L	170_S	0.658	0.23
29_K	164_F	0.658	0.23
447_S	465_T	0.657	0.23
230_W	300_S	0.657	0.23
138_N	415_I	0.657	0.23
19_K	340_V	0.656	0.23
155_F	270_L	0.655	0.23
35_N	117_P	0.653	0.23
99_R	346_S	0.652	0.23
385_A	408_A	0.651	0.23
131_K	330_R	0.649	0.23
190_L	194_L	0.649	0.23
163_L	206_G	0.647	0.23
274_A	277_G	0.646	0.23
12_L	136_A	0.646	0.23
58_H	111_P	0.645	0.23
265_F	272_A	0.645	0.23
185_I	418_A	0.645	0.23
278_H	347_G	0.643	0.22
450_I	456_G	0.642	0.22
164_F	409_I	0.642	0.22
280_A	506_F	0.641	0.22
104_A	275_F	0.640	0.22
409_I	416_T	0.639	0.22
205_G	480_L	0.638	0.22
295_H	304_G	0.638	0.22
109_G	152_L	0.637	0.22
35_N	307_A	0.637	0.22
460_F	526_L	0.637	0.22
223_E	450_I	0.637	0.22
44_Q	86_T	0.636	0.22
115_V	306_I	0.635	0.22
305_G	526_L	0.633	0.22
115_V	137_L	0.632	0.22
94_P	127_F	0.632	0.22
186_A	208_W	0.631	0.22
180_I	249_R	0.629	0.22
153_S	446_V	0.629	0.22
88_K	332_F	0.629	0.22
36_S	122_K	0.629	0.22
243_S	262_P	0.629	0.22
28_V	191_A	0.628	0.22
308_A	402_T	0.627	0.22
250_K	511_L	0.626	0.22
439_A	480_L	0.625	0.22
202_A	425_S	0.625	0.22
160_F	349_L	0.624	0.22
281_V	285_K	0.624	0.22
109_G	233_Q	0.623	0.22
298_S	346_S	0.623	0.22
105_V	390_L	0.621	0.21
103_N	299_A	0.621	0.21
152_L	384_G	0.621	0.21
246_P	511_L	0.619	0.21
97_V	384_G	0.618	0.21
225_A	418_A	0.618	0.21
147_I	207_G	0.618	0.21
29_K	179_R	0.617	0.21
241_A	262_P	0.616	0.21
421_T	506_F	0.615	0.21
349_L	531_N	0.615	0.21
198_I	504_G	0.614	0.21
90_K	523_V	0.614	0.21
72_T	88_K	0.614	0.21
312_L	376_L	0.614	0.21
408_A	505_V	0.614	0.21
159_V	397_T	0.614	0.21
278_H	366_Y	0.613	0.21
399_I	402_T	0.612	0.21
93_L	118_F	0.610	0.21
434_F	472_V	0.609	0.21
223_E	294_L	0.608	0.21
33_G	50_N	0.607	0.21
355_I	521_I	0.607	0.21
446_V	467_H	0.604	0.21
195_Q	277_G	0.604	0.21
62_V	419_V	0.604	0.21
9_I	14_L	0.604	0.21
51_E	112_V	0.604	0.21
354_I	425_S	0.603	0.21
305_G	308_A	0.603	0.21
158_T	265_F	0.603	0.21
141_T	492_N	0.602	0.21
51_E	384_G	0.602	0.21
120_I	211_A	0.602	0.21
383_L	495_T	0.601	0.21
188_L	299_A	0.600	0.21
63_Y	151_A	0.599	0.21
202_A	420_F	0.599	0.21
186_A	382_V	0.598	0.20
298_S	399_I	0.598	0.20
104_A	112_V	0.596	0.20
282_V	390_L	0.595	0.20
192_L	296_L	0.594	0.20
79_K	82_H	0.594	0.20
36_S	43_A	0.594	0.20
374_S	378_V	0.593	0.20
243_S	394_Q	0.593	0.20
206_G	275_F	0.592	0.20
95_K	333_S	0.592	0.20
30_S	434_F	0.592	0.20
199_Q	277_G	0.591	0.20
305_G	339_A	0.589	0.20
12_L	29_K	0.589	0.20
42_P	425_S	0.589	0.20
106_S	456_G	0.589	0.20
487_L	490_S	0.588	0.20
354_I	514_N	0.588	0.20
112_V	419_V	0.587	0.20
344_L	471_P	0.587	0.20
205_G	521_I	0.587	0.20
103_N	343_I	0.586	0.20
309_L	403_L	0.586	0.20
366_Y	369_A	0.585	0.20
374_S	413_V	0.585	0.20
119_S	290_L	0.585	0.20
476_Q	526_L	0.584	0.20
239_L	271_L	0.583	0.20
501_K	505_V	0.583	0.20
142_A	420_F	0.583	0.20
111_P	284_E	0.583	0.20
164_F	239_L	0.582	0.20
132_A	397_T	0.581	0.20
367_G	425_S	0.581	0.20
450_I	460_F	0.581	0.20
130_Q	486_G	0.580	0.20
53_V	366_Y	0.578	0.20
384_G	387_H	0.578	0.20
255_S	259_W	0.577	0.20
108_D	406_E	0.577	0.20
178_R	205_G	0.576	0.20
53_V	58_H	0.576	0.20
217_I	227_G	0.575	0.20
19_K	509_Q	0.575	0.20
349_L	352_F	0.575	0.20
41_A	268_G	0.574	0.19
464_V	525_G	0.572	0.19
23_A	32_P	0.571	0.19
64_N	112_V	0.571	0.19
110_H	366_Y	0.570	0.19
370_L	525_G	0.570	0.19
376_L	409_I	0.570	0.19
37_E	116_I	0.569	0.19
50_N	299_A	0.569	0.19
345_F	378_V	0.569	0.19
70_V	419_V	0.568	0.19
66_N	451_S	0.567	0.19
11_L	459_V	0.567	0.19
40_S	269_L	0.566	0.19
40_S	187_A	0.566	0.19
138_N	312_L	0.565	0.19
359_D	382_V	0.564	0.19
95_K	121_G	0.564	0.19
134_D	309_L	0.563	0.19
98_Y	458_N	0.563	0.19
177_T	200_T	0.562	0.19
299_A	364_T	0.562	0.19
277_G	295_H	0.562	0.19
73_D	260_T	0.562	0.19
22_F	379_F	0.560	0.19
169_K	328_T	0.558	0.19
191_A	480_L	0.558	0.19
249_R	275_F	0.557	0.19
177_T	264_I	0.557	0.19
108_D	370_L	0.557	0.19
102_W	280_A	0.555	0.19
9_I	234_A	0.554	0.19
108_D	121_G	0.554	0.19
87_V	139_P	0.554	0.19
393_K	409_I	0.554	0.19
38_L	87_V	0.553	0.19
270_L	392_R	0.552	0.19
190_L	481_T	0.551	0.19
24_H	373_K	0.551	0.19
33_G	482_V	0.550	0.19
161_F	426_P	0.550	0.19
104_A	536_M	0.550	0.19
65_S	329_V	0.549	0.18
448_L	483_Y	0.548	0.18
21_S	111_P	0.548	0.18
110_H	373_K	0.547	0.18
291_M	345_F	0.547	0.18
306_I	493_K	0.546	0.18
277_G	284_E	0.545	0.18
5_R	45_V	0.545	0.18
136_A	397_T	0.545	0.18
70_V	450_I	0.544	0.18
226_G	344_L	0.543	0.18
340_V	403_L	0.542	0.18
382_V	482_V	0.541	0.18
194_L	454_Q	0.541	0.18
39_K	44_Q	0.540	0.18
45_V	333_S	0.540	0.18
206_G	409_I	0.539	0.18
182_T	186_A	0.537	0.18
44_Q	374_S	0.537	0.18
228_S	260_T	0.537	0.18
302_W	367_G	0.537	0.18
94_P	337_L	0.536	0.18
151_A	424_P	0.536	0.18
240_L	514_N	0.536	0.18
120_I	383_L	0.536	0.18
198_I	202_A	0.536	0.18
278_H	406_E	0.535	0.18
76_E	209_G	0.534	0.18
348_L	417_A	0.534	0.18
216_Y	220_T	0.532	0.18
164_F	335_W	0.531	0.18
54_E	98_Y	0.531	0.18
304_G	373_K	0.531	0.18
65_S	119_S	0.530	0.18
342_V	505_V	0.530	0.18
290_L	419_V	0.529	0.18
10_L	379_F	0.528	0.18
95_K	451_S	0.528	0.18
194_L	238_V	0.528	0.18
467_H	478_I	0.528	0.18
238_V	364_T	0.526	0.18
208_W	211_A	0.526	0.18
147_I	314_S	0.524	0.18
236_L	272_A	0.524	0.18
129_S	376_L	0.523	0.18
221_L	450_I	0.523	0.18
97_V	235_A	0.523	0.18
33_G	377_F	0.522	0.17
50_N	87_V	0.522	0.17
233_Q	274_A	0.520	0.17
192_L	234_A	0.520	0.17
9_I	22_F	0.518	0.17
463_R	468_N	0.518	0.17
211_A	217_I	0.518	0.17
297_T	352_F	0.516	0.17
51_E	302_W	0.515	0.17
23_A	110_H	0.515	0.17
233_Q	350_N	0.514	0.17
199_Q	226_G	0.513	0.17
145_R	161_F	0.513	0.17
146_A	414_L	0.512	0.17
152_L	273_K	0.512	0.17
264_I	378_V	0.511	0.17
273_K	389_L	0.511	0.17
66_N	145_R	0.511	0.17
278_H	336_A	0.510	0.17
358_M	509_Q	0.510	0.17
500_E	503_K	0.510	0.17
126_G	232_I	0.509	0.17
236_L	294_L	0.508	0.17
7_W	189_G	0.507	0.17
190_L	378_V	0.507	0.17
36_S	140_G	0.506	0.17
36_S	79_K	0.506	0.17
119_S	477_Q	0.506	0.17
353_F	356_R	0.506	0.17
152_L	355_I	0.506	0.17
352_F	356_R	0.505	0.17
180_I	264_I	0.504	0.17
457_K	485_T	0.504	0.17
9_I	120_I	0.502	0.17
131_K	264_I	0.501	0.17
528_G	531_N	0.501	0.17
151_A	420_F	0.501	0.17
261_A	382_V	0.500	0.17
480_L	498_L	0.500	0.17
25_A	42_P	0.500	0.17

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1lyqA	1	0.1811	100	0.787	Contact Map
2c9rA	1	0.1756	100	0.792	Contact Map
1qfhA	2	0.1885	88.7	0.962	Contact Map
3m7oA	3	0.1756	85.7	0.964	Contact Map
4n0rA	2	0.1534	85.5	0.964	Contact Map
2ds4A	1	0.2015	84.2	0.965	Contact Map
4umgA	1	0.1848	82.8	0.965	Contact Map
1wlhA	2	0.1774	81.7	0.966	Contact Map
2d7pA	1	0.1848	81.5	0.966	Contact Map
4e9lA	1	0.0092	81.2	0.966	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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