YOAH - BACSU - GREMLIN Contacts

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YOAH - Putative methyl-accepting chemotaxis protein YoaH

UniProt:	C0SP89	Sequences: MKVKTKLLGIISILVVSIIGIGGSSVFMISSTVKKNEELKDKMEFQKEIKHIQYELTGLSNDERGFLITRDKEYDEGMKGKADDVLKSLDRVNDLIDEEKYQSNIEDIKTSFTQYRALNQQVVTAYSSNPKKAETIHFGEERTIRKEGVAPAVNKLSDRLDQEVEDLKDEIQGNGKMSQSLIIIVTGISVILGIVLSIMLLKSIMVPLRSINKQLEEIAHGEADLTKKVIVKNKDEFGQLAQSFNSFTHSLTQIVKQISSSSEQVAASSEELSASAEESKSTSEHISRAMQMAADSNVKQSSMTEKSAESITELLDSISSVASNTGNIADLSSSMRDKAEIGSKSVNKMLDQMKFIDKSVDSAGNGLQTLVASTAEISDISSLITTISEQTNLLALNAAIEAARAGEQGKGFAVVAEEVRKLADETNKSANHIQSVVATIQNESIETVNNIKVVQENVSSGIVLSQETTGNFNEILNLVEQVTSQIQEVAAATQQLTSGVEVIQHTVHTLAAGTKETSANTEAVANSSQEQLHSMGEISYAAESLSQLAEELQTVINRFKY	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	561 (524)
Sequences:	20716 (17672)
Seq/√Len:	772.0

ECOLI - MCP3 MCP4 MCP2 MCP1 AER
BACSU - YOAH YVAQ TLPB MCPB TLPA MCPA MCPC TLPC HEMAT YFMS
HALSA - HTR4 HTR2 Q9HRA1 COST Q9HPA2 HTR7 Q9HS86 Q9HQX8 Q9HRN6 Q9HR88 HMAT Q9HP10 HTR9 Q9HPQ5 HTR1 Q9HQT5 Q9HPW6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
233_N	238_G	4.156	1.00
217_E	224_D	3.618	1.00
23_G	27_F	3.124	1.00
2_K	5_T	2.918	1.00
228_K	252_T	2.891	1.00
245_N	248_T	2.553	1.00
6_K	235_D	2.542	1.00
217_E	227_K	2.428	1.00
22_G	186_T	2.391	1.00
202_K	206_V	2.360	1.00
130_P	133_A	2.342	1.00
216_E	239_Q	2.291	1.00
372_A	375_A	2.264	1.00
344_K	348_K	2.258	1.00
356_I	461_G	2.244	1.00
180_S	184_I	2.232	1.00
463_V	467_E	2.196	1.00
211_I	241_A	2.174	1.00
373_S	439_T	2.148	1.00
215_L	247_F	2.135	1.00
216_E	246_S	2.118	1.00
338_K	474_E	2.109	1.00
212_N	239_Q	2.102	1.00
93_N	109_K	2.053	1.00
216_E	220_H	2.032	1.00
376_E	379_D	2.030	1.00
350_L	469_T	2.006	1.00
218_I	247_F	2.005	1.00
320_S	323_S	2.004	1.00
355_F	457_N	1.997	1.00
215_L	244_F	1.997	1.00
212_N	243_S	1.981	1.00
373_S	443_E	1.980	1.00
201_L	205_M	1.979	1.00
382_S	386_T	1.974	1.00
83_D	87_K	1.965	1.00
235_D	238_G	1.963	1.00
25_S	182_I	1.941	1.00
337_D	341_I	1.936	1.00
177_M	181_L	1.926	1.00
466_Q	470_G	1.924	1.00
76_E	80_G	1.910	1.00
369_T	443_E	1.874	1.00
509_T	512_A	1.868	1.00
459_S	463_V	1.851	1.00
218_I	248_T	1.844	1.00
228_K	249_H	1.834	1.00
228_K	245_N	1.804	1.00
426_T	430_A	1.797	1.00
467_E	470_G	1.792	1.00
341_I	344_K	1.777	1.00
366_G	447_T	1.766	1.00
351_D	355_F	1.751	1.00
239_Q	242_Q	1.735	1.00
158_D	162_Q	1.734	1.00
481_Q	484_S	1.732	1.00
90_D	94_D	1.721	1.00
348_K	467_E	1.711	1.00
184_I	188_I	1.708	1.00
536_G	540_Y	1.707	1.00
328_I	486_I	1.707	1.00
102_Q	106_E	1.704	1.00
6_K	203_S	1.703	1.00
252_T	256_K	1.701	1.00
470_G	474_E	1.697	1.00
348_K	351_D	1.696	1.00
502_V	505_H	1.691	1.00
99_E	102_Q	1.686	1.00
228_K	248_T	1.684	1.00
245_N	249_H	1.683	1.00
183_I	187_G	1.681	1.00
176_K	180_S	1.680	1.00
330_D	334_S	1.675	1.00
72_K	76_E	1.668	1.00
530_E	533_H	1.663	1.00
215_L	243_S	1.661	1.00
303_M	509_T	1.660	1.00
379_D	382_S	1.658	1.00
334_S	337_D	1.643	1.00
216_E	243_S	1.637	1.00
267_A	271_E	1.623	1.00
330_D	333_S	1.609	1.00
367_L	447_T	1.605	1.00
253_Q	257_Q	1.604	1.00
428_K	432_H	1.602	1.00
434_Q	438_A	1.601	1.00
120_Q	124_T	1.598	1.00
378_S	441_Q	1.593	1.00
519_A	523_A	1.588	1.00
480_E	484_S	1.584	1.00
354_K	466_Q	1.582	1.00
456_E	460_S	1.580	1.00
277_E	281_S	1.577	1.00
417_E	420_R	1.576	1.00
14_L	193_G	1.575	1.00
371_V	448_V	1.571	1.00
103_S	107_D	1.566	1.00
366_G	446_E	1.565	1.00
106_E	110_T	1.562	1.00
460_S	463_V	1.559	1.00
537_E	540_Y	1.558	1.00
211_I	240_L	1.555	1.00
342_G	475_I	1.554	1.00
347_N	351_D	1.547	1.00
421_K	424_D	1.538	1.00
259_S	263_E	1.517	1.00
4_K	202_K	1.512	1.00
249_H	253_Q	1.502	1.00
348_K	464_L	1.501	1.00
151_P	155_K	1.497	1.00
376_E	432_H	1.491	1.00
470_G	473_N	1.485	1.00
121_Q	124_T	1.482	1.00
327_N	330_D	1.480	1.00
456_E	459_S	1.480	1.00
140_E	144_I	1.478	1.00
215_L	240_L	1.474	1.00
75_D	79_K	1.474	1.00
333_S	337_D	1.470	1.00
372_A	376_E	1.464	1.00
87_K	91_R	1.457	1.00
399_A	417_E	1.436	1.00
312_T	316_D	1.436	1.00
197_S	201_L	1.430	1.00
339_A	476_L	1.428	1.00
248_T	252_T	1.426	1.00
529_Q	533_H	1.424	1.00
86_L	90_D	1.421	1.00
27_F	31_S	1.415	1.00
279_S	283_S	1.410	1.00
211_I	244_F	1.408	1.00
326_G	330_D	1.408	1.00
274_A	278_E	1.407	1.00
501_E	505_H	1.406	1.00
424_D	428_K	1.405	1.00
107_D	111_S	1.401	1.00
4_K	8_L	1.398	1.00
179_Q	183_I	1.391	1.00
113_T	117_A	1.377	1.00
373_S	376_E	1.373	1.00
321_V	493_T	1.371	1.00
340_E	344_K	1.363	1.00
60_S	64_R	1.360	1.00
176_K	179_Q	1.360	1.00
474_E	477_N	1.359	1.00
385_T	434_Q	1.358	1.00
224_D	227_K	1.354	1.00
351_D	354_K	1.352	1.00
431_N	435_S	1.352	1.00
523_A	526_N	1.349	1.00
165_E	169_D	1.348	1.00
369_T	372_A	1.343	1.00
349_M	468_T	1.340	1.00
494_Q	498_S	1.333	1.00
260_S	263_E	1.330	1.00
257_Q	260_S	1.324	1.00
512_A	516_E	1.322	1.00
533_H	537_E	1.315	1.00
231_V	245_N	1.314	1.00
169_D	173_G	1.313	1.00
118_L	121_Q	1.311	1.00
73_E	76_E	1.305	1.00
87_K	90_D	1.304	1.00
319_S	323_S	1.302	1.00
100_K	103_S	1.299	1.00
306_K	309_E	1.298	1.00
345_S	467_E	1.297	1.00
352_Q	460_S	1.296	1.00
340_E	480_E	1.288	1.00
519_A	522_E	1.285	1.00
209_R	212_N	1.283	1.00
428_K	431_N	1.274	1.00
20_G	24_S	1.273	1.00
323_S	327_N	1.272	1.00
210_S	230_I	1.268	1.00
477_N	481_Q	1.262	1.00
358_K	361_D	1.260	1.00
213_K	216_E	1.255	1.00
399_A	420_R	1.254	1.00
358_K	362_S	1.251	1.00
374_T	444_S	1.250	1.00
278_E	281_S	1.247	1.00
368_Q	372_A	1.238	1.00
445_I	449_N	1.237	1.00
175_G	179_Q	1.234	1.00
53_Q	57_T	1.234	1.00
148_G	151_P	1.232	1.00
473_N	477_N	1.229	1.00
74_Y	77_G	1.217	1.00
271_E	274_A	1.207	1.00
343_S	473_N	1.202	1.00
267_A	270_E	1.202	1.00
4_K	201_L	1.201	1.00
361_D	365_N	1.201	1.00
302_S	305_E	1.195	1.00
336_R	340_E	1.194	1.00
214_Q	229_V	1.192	1.00
99_E	103_S	1.192	1.00
162_Q	166_D	1.190	1.00
231_V	241_A	1.189	1.00
337_D	340_E	1.187	1.00
270_E	274_A	1.184	1.00
385_T	430_A	1.179	1.00
263_E	267_A	1.179	1.00
326_G	494_Q	1.178	1.00
260_S	264_Q	1.175	1.00
302_S	306_K	1.175	1.00
154_N	158_D	1.175	1.00
257_Q	537_E	1.174	1.00
168_K	172_Q	1.170	1.00
349_M	465_S	1.169	1.00
211_I	215_L	1.169	1.00
362_S	365_N	1.167	1.00
250_S	253_Q	1.164	1.00
194_I	198_I	1.154	1.00
491_A	495_Q	1.153	1.00
180_S	183_I	1.151	1.00
508_H	512_A	1.148	1.00
342_G	472_F	1.145	1.00
353_M	461_G	1.143	1.00
109_K	113_T	1.142	1.00
91_R	94_D	1.141	1.00
220_H	246_S	1.140	1.00
212_N	216_E	1.136	1.00
80_G	84_D	1.132	1.00
319_S	501_E	1.132	1.00
344_K	347_N	1.131	1.00
147_E	151_P	1.130	1.00
229_V	245_N	1.129	1.00
28_M	31_S	1.127	1.00
516_E	519_A	1.123	1.00
84_D	87_K	1.122	1.00
365_N	368_Q	1.121	1.00
61_N	65_G	1.120	1.00
143_T	147_E	1.119	1.00
155_K	158_D	1.114	1.00
383_L	429_S	1.113	1.00
396_L	404_R	1.113	1.00
212_N	240_L	1.112	1.00
354_K	358_K	1.110	1.00
54_Y	57_T	1.109	1.00
29_I	33_V	1.109	1.00
343_S	476_L	1.109	1.00
90_D	93_N	1.108	1.00
526_N	530_E	1.105	1.00
77_G	80_G	1.104	1.00
367_L	448_V	1.101	1.00
48_E	51_H	1.100	1.00
357_D	462_I	1.099	1.00
33_V	175_G	1.096	1.00
299_K	302_S	1.095	1.00
88_S	91_R	1.094	1.00
106_E	109_K	1.090	1.00
18_I	21_I	1.090	1.00
41_D	45_F	1.088	1.00
463_V	466_Q	1.088	1.00
495_Q	498_S	1.087	1.00
341_I	467_E	1.086	1.00
181_L	184_I	1.083	1.00
314_L	500_V	1.083	1.00
256_K	260_S	1.083	1.00
76_E	79_K	1.078	1.00
217_E	220_H	1.078	1.00
117_A	121_Q	1.066	1.00
323_S	326_G	1.064	1.00
231_V	235_D	1.063	1.00
512_A	515_K	1.062	1.00
210_S	213_K	1.061	1.00
491_A	494_Q	1.060	1.00
152_A	155_K	1.055	1.00
531_Q	545_L	1.054	1.00
341_I	474_E	1.051	1.00
155_K	159_R	1.050	1.00
313_E	316_D	1.049	1.00
343_S	347_N	1.049	1.00
542_A	545_L	1.049	1.00
8_L	12_S	1.048	1.00
360_V	458_V	1.047	1.00
2_K	239_Q	1.046	1.00
167_L	170_E	1.043	1.00
137_H	141_E	1.043	1.00
30_S	179_Q	1.040	1.00
435_S	439_T	1.038	1.00
101_Y	104_N	1.036	1.00
78_M	82_A	1.035	1.00
142_R	146_K	1.034	1.00
380_I	436_V	1.034	1.00
55_E	59_L	1.033	1.00
62_D	65_G	1.032	1.00
209_R	213_K	1.030	1.00
241_A	245_N	1.028	1.00
376_E	439_T	1.027	1.00
207_P	236_E	1.027	1.00
335_M	479_V	1.024	1.00
3_V	237_F	1.022	1.00
107_D	110_T	1.015	1.00
110_T	114_Q	1.015	1.00
37_E	40_K	1.014	1.00
79_K	83_D	1.002	1.00
26_V	179_Q	1.001	1.00
84_D	88_S	1.001	1.00
141_E	144_I	1.001	1.00
98_E	101_Y	1.000	1.00
29_I	178_S	1.000	1.00
365_N	369_T	0.999	1.00
225_L	251_L	0.996	1.00
432_H	435_S	0.992	1.00
116_R	120_Q	0.991	1.00
131_K	135_T	0.989	1.00
229_V	241_A	0.988	1.00
370_L	440_I	0.987	1.00
242_Q	245_N	0.983	1.00
309_E	313_E	0.978	1.00
117_A	120_Q	0.976	1.00
173_G	177_M	0.975	1.00
208_L	240_L	0.975	1.00
359_S	457_N	0.974	1.00
307_S	503_I	0.973	1.00
156_L	160_L	0.972	1.00
24_S	28_M	0.971	1.00
203_S	207_P	0.971	1.00
119_N	123_V	0.969	1.00
431_N	434_Q	0.969	1.00
19_I	23_G	0.968	1.00
244_F	247_F	0.967	1.00
114_Q	117_A	0.965	1.00
366_G	450_N	0.965	1.00
85_V	88_S	0.965	1.00
472_F	475_I	0.964	1.00
57_T	60_S	0.960	1.00
198_I	202_K	0.960	1.00
331_L	481_Q	0.959	1.00
281_S	284_E	0.958	1.00
246_S	249_H	0.958	1.00
214_Q	244_F	0.956	1.00
541_A	544_S	0.948	1.00
112_F	116_R	0.947	1.00
217_E	247_F	0.946	1.00
234_K	238_G	0.945	1.00
324_N	488_E	0.943	1.00
119_N	122_V	0.937	1.00
145_R	148_G	0.936	1.00
533_H	536_G	0.934	1.00
17_S	189_S	0.934	1.00
253_Q	256_K	0.933	1.00
300_Q	304_T	0.931	1.00
100_K	104_N	0.931	1.00
207_P	233_N	0.929	1.00
304_T	510_L	0.929	1.00
311_I	507_V	0.927	1.00
11_I	197_S	0.927	1.00
515_K	519_A	0.926	1.00
195_V	199_M	0.926	1.00
64_R	68_I	0.924	1.00
246_S	250_S	0.923	1.00
104_N	107_D	0.923	1.00
45_F	49_I	0.922	1.00
230_I	245_N	0.921	1.00
266_A	270_E	0.920	1.00
539_S	543_E	0.917	1.00
237_F	241_A	0.914	1.00
166_D	170_E	0.911	1.00
89_L	93_N	0.909	1.00
363_A	450_N	0.908	1.00
98_E	102_Q	0.908	1.00
206_V	210_S	0.905	1.00
522_E	526_N	0.905	1.00
336_R	480_E	0.902	1.00
132_K	135_T	0.901	1.00
386_T	389_E	0.900	1.00
148_G	152_A	0.899	1.00
464_L	467_E	0.898	1.00
103_S	106_E	0.898	1.00
385_T	389_E	0.897	1.00
305_E	309_E	0.895	1.00
218_I	244_F	0.895	1.00
338_K	478_L	0.894	1.00
276_A	283_S	0.894	1.00
187_G	191_I	0.893	1.00
425_E	428_K	0.892	1.00
73_E	77_G	0.892	1.00
15_V	193_G	0.889	1.00
121_Q	125_A	0.889	1.00
136_I	140_E	0.886	1.00
427_N	431_N	0.885	1.00
110_T	113_T	0.882	1.00
10_I	14_L	0.881	1.00
417_E	421_K	0.880	1.00
438_A	442_N	0.880	1.00
346_V	465_S	0.879	1.00
280_K	283_S	0.877	1.00
256_K	259_S	0.875	1.00
21_I	25_S	0.874	1.00
22_G	26_V	0.872	1.00
89_L	92_V	0.870	1.00
371_V	445_I	0.867	1.00
346_V	468_T	0.867	1.00
66_F	126_Y	0.862	1.00
244_F	248_T	0.860	1.00
272_L	276_A	0.860	1.00
36_N	39_L	0.860	1.00
498_S	502_V	0.859	1.00
143_T	148_G	0.859	1.00
213_K	217_E	0.857	1.00
257_Q	261_S	0.853	1.00
149_V	153_V	0.853	1.00
488_E	491_A	0.851	1.00
3_V	236_E	0.851	1.00
356_I	458_V	0.850	1.00
11_I	14_L	0.849	1.00
133_A	137_H	0.848	1.00
316_D	320_S	0.846	1.00
258_I	261_S	0.845	1.00
30_S	34_K	0.845	1.00
24_S	27_F	0.845	1.00
484_S	487_Q	0.843	1.00
68_I	71_D	0.843	1.00
280_K	284_E	0.843	1.00
225_L	255_V	0.843	1.00
231_V	242_Q	0.842	1.00
4_K	205_M	0.842	1.00
210_S	214_Q	0.837	1.00
540_Y	543_E	0.837	1.00
353_M	356_I	0.837	1.00
357_D	459_S	0.833	1.00
524_V	527_S	0.832	1.00
59_L	62_D	0.831	1.00
274_A	277_E	0.828	1.00
208_L	237_F	0.828	1.00
484_S	488_E	0.827	1.00
442_N	446_E	0.826	1.00
312_T	504_Q	0.826	1.00
207_P	237_F	0.824	1.00
141_E	145_R	0.824	1.00
77_G	81_K	0.823	1.00
355_F	358_K	0.822	1.00
56_L	59_L	0.821	1.00
375_A	445_I	0.819	1.00
44_E	48_E	0.819	1.00
380_I	437_V	0.818	1.00
28_M	178_S	0.816	1.00
361_D	455_Q	0.814	1.00
435_S	438_A	0.812	1.00
214_Q	217_E	0.811	1.00
336_R	483_T	0.808	1.00
272_L	283_S	0.806	1.00
159_R	162_Q	0.806	1.00
10_I	17_S	0.803	1.00
160_L	163_E	0.803	1.00
538_I	545_L	0.802	1.00
149_V	152_A	0.802	1.00
172_Q	176_K	0.802	1.00
29_I	32_T	0.801	1.00
276_A	280_K	0.799	1.00
425_E	432_H	0.798	1.00
151_P	154_N	0.797	1.00
121_Q	141_E	0.797	1.00
511_A	515_K	0.796	1.00
318_I	500_V	0.795	1.00
27_F	30_S	0.791	1.00
215_L	218_I	0.790	1.00
181_L	185_V	0.789	1.00
370_L	447_T	0.789	1.00
91_R	95_L	0.787	1.00
83_D	86_L	0.786	1.00
338_K	341_I	0.785	1.00
265_V	268_S	0.785	1.00
122_V	126_Y	0.782	1.00
376_E	436_V	0.782	1.00
314_L	496_L	0.779	1.00
205_M	209_R	0.779	1.00
371_V	375_A	0.779	1.00
146_K	150_A	0.777	1.00
347_N	473_N	0.777	1.00
278_E	282_T	0.777	1.00
505_H	509_T	0.775	1.00
177_M	180_S	0.775	1.00
201_L	204_I	0.770	1.00
477_N	480_E	0.768	1.00
139_G	142_R	0.768	1.00
315_L	504_Q	0.768	1.00
214_Q	227_K	0.766	1.00
300_Q	514_T	0.766	1.00
206_V	209_R	0.765	1.00
219_A	246_S	0.763	1.00
389_E	400_I	0.763	1.00
457_N	460_S	0.763	1.00
85_V	89_L	0.761	1.00
327_N	485_Q	0.756	1.00
146_K	149_V	0.753	1.00
386_T	425_E	0.751	1.00
47_K	50_K	0.751	1.00
152_A	156_L	0.749	1.00
466_Q	469_T	0.749	1.00
86_L	116_R	0.747	1.00
26_V	30_S	0.747	1.00
329_A	333_S	0.747	1.00
80_G	83_D	0.747	1.00
255_V	258_I	0.745	1.00
120_Q	123_V	0.745	1.00
250_S	544_S	0.743	1.00
316_D	319_S	0.742	1.00
501_E	504_Q	0.741	1.00
505_H	508_H	0.740	1.00
227_K	248_T	0.738	1.00
38_E	41_D	0.738	1.00
93_N	106_E	0.737	1.00
369_T	373_S	0.737	1.00
199_M	202_K	0.737	1.00
108_I	112_F	0.737	1.00
209_R	239_Q	0.736	1.00
32_T	36_N	0.735	1.00
111_S	152_A	0.733	1.00
109_K	112_F	0.732	1.00
299_K	303_M	0.732	1.00
334_S	478_L	0.729	1.00
318_I	493_T	0.729	1.00
144_I	148_G	0.728	1.00
125_A	130_P	0.726	1.00
45_F	48_E	0.722	1.00
3_V	208_L	0.722	1.00
147_E	150_A	0.722	1.00
374_T	380_I	0.721	1.00
272_L	275_S	0.721	1.00
43_M	46_Q	0.720	1.00
26_V	175_G	0.719	1.00
31_S	35_K	0.718	1.00
487_Q	491_A	0.718	1.00
15_V	197_S	0.717	1.00
361_D	459_S	0.717	1.00
339_A	342_G	0.717	1.00
57_T	61_N	0.717	1.00
526_N	529_Q	0.716	1.00
113_T	116_R	0.715	1.00
124_T	127_S	0.712	1.00
22_G	182_I	0.711	1.00
441_Q	445_I	0.710	1.00
111_S	114_Q	0.707	1.00
307_S	506_T	0.707	1.00
82_A	86_L	0.707	1.00
61_N	64_R	0.705	1.00
476_L	480_E	0.705	1.00
65_G	68_I	0.704	1.00
261_S	264_Q	0.704	1.00
247_F	251_L	0.702	1.00
379_D	383_L	0.701	1.00
495_Q	499_G	0.701	1.00
374_T	440_I	0.696	1.00
531_Q	535_M	0.696	1.00
359_S	362_S	0.693	1.00
254_I	258_I	0.692	1.00
332_S	479_V	0.691	1.00
258_I	262_S	0.689	1.00
59_L	63_E	0.689	1.00
114_Q	118_L	0.687	1.00
282_T	513_G	0.687	1.00
50_K	53_Q	0.686	1.00
299_K	509_T	0.686	1.00
381_S	385_T	0.685	1.00
81_K	84_D	0.684	1.00
364_G	455_Q	0.684	1.00
498_S	501_E	0.680	1.00
44_E	47_K	0.679	1.00
63_E	67_L	0.679	1.00
50_K	54_Y	0.677	1.00
154_N	157_S	0.676	1.00
214_Q	218_I	0.676	1.00
112_F	115_Y	0.675	1.00
254_I	257_Q	0.672	1.00
164_V	167_L	0.672	1.00
263_E	266_A	0.671	1.00
444_S	448_V	0.670	1.00
42_K	46_Q	0.670	1.00
468_T	471_N	0.668	1.00
52_I	85_V	0.666	1.00
444_S	447_T	0.665	1.00
352_Q	464_L	0.664	1.00
107_D	152_A	0.663	1.00
75_D	82_A	0.662	1.00
104_N	108_I	0.661	1.00
221_G	247_F	0.661	1.00
315_L	500_V	0.660	1.00
236_E	239_Q	0.660	1.00
65_G	69_T	0.658	1.00
45_F	160_L	0.657	1.00
86_L	89_L	0.657	1.00
360_V	363_A	0.657	1.00
56_L	60_S	0.656	1.00
502_V	506_T	0.656	1.00
64_R	69_T	0.656	1.00
328_I	485_Q	0.655	1.00
34_K	37_E	0.655	1.00
446_E	449_N	0.654	1.00
219_A	243_S	0.654	1.00
147_E	152_A	0.654	1.00
369_T	446_E	0.652	1.00
469_T	473_N	0.652	1.00
392_N	420_R	0.650	1.00
375_A	379_D	0.648	1.00
309_E	312_T	0.645	1.00
170_E	174_N	0.643	1.00
423_A	426_T	0.642	1.00
55_E	58_G	0.641	1.00
49_I	52_I	0.641	1.00
46_Q	50_K	0.640	1.00
116_R	119_N	0.639	1.00
63_E	119_N	0.636	1.00
310_S	313_E	0.636	1.00
442_N	445_I	0.635	1.00
276_A	279_S	0.635	1.00
204_I	207_P	0.633	1.00
324_N	485_Q	0.633	1.00
520_N	523_A	0.632	1.00
513_G	517_T	0.632	1.00
534_S	537_E	0.631	1.00
523_A	527_S	0.630	1.00
191_I	195_V	0.630	1.00
329_A	487_Q	0.625	1.00
380_I	383_L	0.622	1.00
85_V	92_V	0.620	1.00
205_M	237_F	0.620	1.00
116_R	122_V	0.620	1.00
203_S	206_V	0.620	1.00
334_S	338_K	0.618	1.00
455_Q	459_S	0.617	1.00
482_V	486_I	0.617	1.00
34_K	38_E	0.616	1.00
379_D	432_H	0.616	1.00
360_V	454_V	0.616	1.00
135_T	138_F	0.616	1.00
362_S	450_N	0.615	1.00
332_S	486_I	0.615	1.00
33_V	37_E	0.614	1.00
313_E	499_G	0.614	1.00
363_A	454_V	0.614	1.00
420_R	424_D	0.613	1.00
29_I	175_G	0.610	1.00
518_S	525_A	0.609	1.00
385_T	431_N	0.608	1.00
58_G	61_N	0.607	1.00
312_T	315_L	0.606	1.00
339_A	475_I	0.606	1.00
426_T	436_V	0.606	1.00
532_L	536_G	0.604	1.00
169_D	172_Q	0.604	1.00
220_H	250_S	0.603	1.00
150_A	154_N	0.603	1.00
529_Q	532_L	0.603	1.00
231_V	238_G	0.603	1.00
345_S	348_K	0.603	1.00
345_S	471_N	0.602	1.00
137_H	140_E	0.602	1.00
25_S	28_M	0.601	1.00
264_Q	267_A	0.600	1.00
496_L	499_G	0.600	1.00
265_V	269_S	0.600	1.00
516_E	520_N	0.600	1.00
123_V	126_Y	0.600	1.00
353_M	462_I	0.599	1.00
132_K	136_I	0.599	1.00
339_A	343_S	0.599	1.00
332_S	482_V	0.597	1.00
380_I	426_T	0.597	1.00
381_S	434_Q	0.596	1.00
303_M	506_T	0.596	1.00
5_T	8_L	0.596	1.00
540_Y	544_S	0.595	1.00
142_R	145_R	0.594	1.00
119_N	126_Y	0.594	1.00
150_A	153_V	0.593	1.00
350_L	465_S	0.593	1.00
272_L	279_S	0.593	1.00
308_A	313_E	0.591	1.00
353_M	465_S	0.591	1.00
307_S	507_V	0.591	1.00
130_P	134_E	0.590	1.00
354_K	357_D	0.590	1.00
345_S	468_T	0.590	1.00
97_D	101_Y	0.589	1.00
133_A	136_I	0.589	1.00
143_T	146_K	0.588	1.00
118_L	122_V	0.587	1.00
42_K	163_E	0.585	1.00
327_N	481_Q	0.585	1.00
333_S	487_Q	0.584	1.00
345_S	464_L	0.582	1.00
389_E	427_N	0.581	1.00
303_M	306_K	0.578	1.00
102_Q	105_I	0.577	1.00
55_E	88_S	0.576	1.00
377_I	437_V	0.573	1.00
348_K	460_S	0.572	1.00
74_Y	82_A	0.572	1.00
115_Y	119_N	0.570	1.00
367_L	371_V	0.570	1.00
335_M	478_L	0.570	1.00
134_E	137_H	0.570	1.00
233_N	237_F	0.569	1.00
157_S	161_D	0.569	1.00
269_S	272_L	0.568	1.00
188_I	192_L	0.566	1.00
481_Q	485_Q	0.566	1.00
395_A	420_R	0.565	1.00
380_I	429_S	0.565	1.00
165_E	168_K	0.564	1.00
63_E	66_F	0.563	1.00
171_I	175_G	0.561	1.00
218_I	251_L	0.561	1.00
262_S	269_S	0.560	1.00
531_Q	538_I	0.557	1.00
36_N	171_I	0.556	1.00
322_A	325_T	0.556	1.00
207_P	235_D	0.555	1.00
355_F	460_S	0.554	1.00
15_V	190_V	0.553	1.00
184_I	187_G	0.552	1.00
212_N	237_F	0.551	1.00
115_Y	118_L	0.550	1.00
482_V	496_L	0.549	1.00
75_D	78_M	0.549	1.00
346_V	349_M	0.549	1.00
300_Q	513_G	0.549	1.00
536_G	539_S	0.548	1.00
374_T	441_Q	0.546	1.00
538_I	542_A	0.546	1.00
235_D	241_A	0.546	1.00
341_I	471_N	0.546	1.00
263_E	539_S	0.545	1.00
3_V	204_I	0.544	1.00
262_S	266_A	0.544	1.00
390_Q	418_E	0.543	1.00
247_F	250_S	0.543	1.00
465_S	469_T	0.542	1.00
258_I	265_V	0.542	1.00
307_S	311_I	0.540	1.00
116_R	123_V	0.540	1.00
238_G	242_Q	0.540	1.00
18_I	25_S	0.539	1.00
468_T	472_F	0.539	1.00
193_G	197_S	0.538	1.00
458_V	461_G	0.538	1.00
139_G	146_K	0.533	1.00
51_H	54_Y	0.533	1.00
35_K	38_E	0.532	1.00
211_I	237_F	0.531	1.00
174_N	177_M	0.531	1.00
269_S	528_S	0.530	1.00
534_S	538_I	0.530	1.00
161_D	165_E	0.528	1.00
54_Y	58_G	0.527	1.00
258_I	542_A	0.526	1.00
221_G	248_T	0.525	1.00
366_G	443_E	0.524	1.00
437_V	441_Q	0.523	1.00
146_K	152_A	0.522	1.00
368_Q	371_V	0.521	1.00
53_Q	154_N	0.521	1.00
389_E	393_L	0.518	1.00
8_L	201_L	0.517	1.00
362_S	366_G	0.517	1.00
301_S	515_K	0.517	1.00
5_T	9_G	0.516	1.00
382_S	385_T	0.516	1.00
325_T	328_I	0.516	1.00
535_M	545_L	0.516	1.00
355_F	359_S	0.516	1.00
270_E	532_L	0.516	1.00
132_K	137_H	0.516	1.00
329_A	490_A	0.515	1.00
491_A	498_S	0.515	1.00
348_K	352_Q	0.513	1.00
163_E	166_D	0.513	1.00
195_V	198_I	0.513	1.00
364_G	368_Q	0.512	1.00
72_K	75_D	0.511	1.00
240_L	244_F	0.511	1.00
313_E	317_S	0.510	1.00
525_A	528_S	0.509	1.00
352_Q	355_F	0.508	1.00
51_H	55_E	0.505	1.00
310_S	499_G	0.503	1.00
38_E	42_K	0.503	1.00
528_S	532_L	0.503	1.00
438_A	441_Q	0.503	1.00
12_S	15_V	0.503	1.00
240_L	247_F	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3zx6A	2	0.5401	100	0.403	Contact Map
2ch7A	2	0.5508	100	0.496	Contact Map
1qu7A	2	0.4046	100	0.531	Contact Map
3g67A	2	0.3797	100	0.598	Contact Map
4i3mA	2	0.262	99.9	0.75	Contact Map
4cq4A	4	0.1533	99.6	0.826	Contact Map
2f95B	2	0.0927	99.3	0.851	Contact Map
4gycB	2	0.107	99.2	0.861	Contact Map
3zccA	2	0.1943	98.8	0.88	Contact Map
4i5sA	2	0.5472	98.5	0.892	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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