GREMLIN Database
SPORE - PF03323 - Spore germination protein KA (GERKA_BACSU)Last updated: 1466147360

Organism: META    
Function: known
Type: BOTH
Uniprot: P49939
Pfam: PF03323 GerA
Co-evolution data: P49939

Domain: 1-120


Notes:
  • This is a large multidomain protein. So far we only modelled the periplasmic part. The transmembrane part is in the works!
  • The second domain (of 4) apears to be the dimerization domain and is not converging...
Function (from Uniprot):
  • Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl.
TMalign/SCOP results (Domain 1-120):
  • 0.54 d2woea_ (ADP-ribosylglycohydrolase)
  • 0.52 d3pdfa2 (Cysteine proteinases)
  • 0.52 d1deua_ (Cysteine proteinases)
  • 0.52 d1dkia_ (Cysteine proteinases)
  • 0.51 d3qsda_ (Cysteine proteinases)
TMalign/SCOP results (Domain 250-430):
  • 0.54 d2qi9a_ (ABC transporter involved in vitamin B12 uptake, BtuC)

Minireview on sporulation in bacillus 
http://jb.asm.org/content/196/7/1297.full.pdf

Models
Name DB Rc Date Action
Model 1-120 P49939_UNI 1.052 03Dec2015 View - Download
Model 1-120 P49939_UNI 1.052 03Dec2015 View - Download
Model 1-120 P49939_UNI 1.051 03Dec2015 View - Download
Model 1-120 P49939_UNI 1.050 03Dec2015 View - Download
Model 1-120 P49939_UNI 1.039 03Dec2015 View - Download
Files
File
P49939_1-120_models.png

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